RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 PNPLA7Q6ZV29 1317 aa15.53■□□□□ 0.08
TSEN54-204ENST00000577197 PHF14O94880 888 aa15.53■□□□□ 0.08
TSEN54-204ENST00000577197 RFC4P35249 363 aa15.53■□□□□ 0.08
TSEN54-204ENST00000577197 AMIGO3Q86WK7 504 aa15.53■□□□□ 0.08
TSEN54-204ENST00000577197 SSH3Q8TE77 659 aa15.53■□□□□ 0.08
TSEN54-204ENST00000577197 NARFQ9UHQ1 456 aa15.53■□□□□ 0.08
TSEN54-204ENST00000577197 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
TSEN54-204ENST00000577197 H7C1W4 665 aa15.52■□□□□ 0.08
TSEN54-204ENST00000577197 NBPF7P0C2Y1 421 aaPredicted RBP15.52■□□□□ 0.08
TSEN54-204ENST00000577197 POLA2Q14181 598 aa15.52■□□□□ 0.08
TSEN54-204ENST00000577197 CWF19L2Q2TBE0 894 aaKnown RBP15.52■□□□□ 0.08
TSEN54-204ENST00000577197 PARP10Q53GL7 1025 aa15.52■□□□□ 0.08
TSEN54-204ENST00000577197 LRRFIP2Q9Y608 721 aaKnown RBP15.52■□□□□ 0.08
TSEN54-204ENST00000577197 CDHR2Q9BYE9 1310 aa15.51■□□□□ 0.07
TSEN54-204ENST00000577197 USP42Q9H9J4 1324 aaKnown RBP15.51■□□□□ 0.07
TSEN54-204ENST00000577197 ZPR1O75312 459 aa15.51■□□□□ 0.07
TSEN54-204ENST00000577197 HSP90B1P14625 803 aaKnown RBP15.51■□□□□ 0.07
TSEN54-204ENST00000577197 CASP7P55210 303 aa15.51■□□□□ 0.07
TSEN54-204ENST00000577197 RABL6Q3YEC7 729 aaPredicted RBP15.51■□□□□ 0.07
TSEN54-204ENST00000577197 COL23A1Q86Y22 540 aaPredicted RBP15.51■□□□□ 0.07
TSEN54-204ENST00000577197 ARXQ96QS3 562 aa15.51■□□□□ 0.07
TSEN54-204ENST00000577197 PLA2G12BQ9BX93 195 aa15.51■□□□□ 0.07
TSEN54-204ENST00000577197 TBC1D2BQ9UPU7 963 aa15.51■□□□□ 0.07
TSEN54-204ENST00000577197 CAMTA2O94983 1202 aa15.5■□□□□ 0.07
TSEN54-204ENST00000577197 PCCAP05165 728 aaPredicted RBP15.5■□□□□ 0.07
TSEN54-204ENST00000577197 NUCB1Q02818 461 aa15.5■□□□□ 0.07
TSEN54-204ENST00000577197 HSP90AB4PQ58FF6 505 aa15.5■□□□□ 0.07
TSEN54-204ENST00000577197 ZNF34Q8IZ26 560 aa15.5■□□□□ 0.07
TSEN54-204ENST00000577197 ZBTB3Q9H5J0 574 aa15.5■□□□□ 0.07
TSEN54-204ENST00000577197 C1orf115Q9H7X2 142 aa15.5■□□□□ 0.07
TSEN54-204ENST00000577197 TUBGCP6Q96RT7 1819 aa15.5■□□□□ 0.07
TSEN54-204ENST00000577197 C4AP0C0L4 1744 aa15.49■□□□□ 0.07
TSEN54-204ENST00000577197 SMIM5Q71RC9 77 aa15.49■□□□□ 0.07
TSEN54-204ENST00000577197 SLC16A10Q8TF71 515 aa15.49■□□□□ 0.07
TSEN54-204ENST00000577197 MSH5O43196 834 aa15.48■□□□□ 0.07
TSEN54-204ENST00000577197 RAB11FIP3O75154 756 aa15.48■□□□□ 0.07
TSEN54-204ENST00000577197 USPL1Q5W0Q7 1092 aa15.48■□□□□ 0.07
TSEN54-204ENST00000577197 ZBTB38Q8NAP3 1195 aaPredicted RBP15.48■□□□□ 0.07
TSEN54-204ENST00000577197 NOP58Q9Y2X3 529 aaKnown RBP15.48■□□□□ 0.07
TSEN54-204ENST00000577197 R3HDM1Q15032 1099 aaKnown RBP15.47■□□□□ 0.07
TSEN54-204ENST00000577197 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
TSEN54-204ENST00000577197 SRP68Q9UHB9 627 aaKnown RBP15.47■□□□□ 0.07
TSEN54-204ENST00000577197 LAMB2P55268 1798 aa15.47■□□□□ 0.07
TSEN54-204ENST00000577197 COL24A1Q17RW2 1714 aa15.46■□□□□ 0.07
TSEN54-204ENST00000577197 GYS1P13807 737 aa15.46■□□□□ 0.07
TSEN54-204ENST00000577197 PPP1R42Q7Z4L9 355 aa15.46■□□□□ 0.07
TSEN54-204ENST00000577197 CHD1LQ86WJ1 897 aa15.46■□□□□ 0.07
TSEN54-204ENST00000577197 NLGN1Q8N2Q7 840 aa15.46■□□□□ 0.07
TSEN54-204ENST00000577197 KAZALD1Q96I82 304 aa15.46■□□□□ 0.07
TSEN54-204ENST00000577197 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
TSEN54-204ENST00000577197 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
TSEN54-204ENST00000577197 PDZRN3Q9UPQ7 1066 aa15.46■□□□□ 0.07
TSEN54-204ENST00000577197 ATP5J2-PTCD1G3V325 749 aa15.45■□□□□ 0.06
TSEN54-204ENST00000577197 SRGAP3O43295 1099 aa15.45■□□□□ 0.06
TSEN54-204ENST00000577197 HLFQ16534 295 aa15.45■□□□□ 0.06
TSEN54-204ENST00000577197 UBE3BQ7Z3V4 1068 aa15.45■□□□□ 0.06
TSEN54-204ENST00000577197 ERC1Q8IUD2 1116 aa15.45■□□□□ 0.06
TSEN54-204ENST00000577197 SUCLG2Q96I99 432 aa15.45■□□□□ 0.06
TSEN54-204ENST00000577197 PNMA6EA0A0J9YXQ4 647 aa15.44■□□□□ 0.06
TSEN54-204ENST00000577197 BICC1Q9H694 974 aaKnown RBP15.44■□□□□ 0.06
TSEN54-204ENST00000577197 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
TSEN54-204ENST00000577197 MYH3P11055 1940 aa15.44■□□□□ 0.06
TSEN54-204ENST00000577197 CASZ1Q86V15 1759 aa15.44■□□□□ 0.06
TSEN54-204ENST00000577197 PSDA5PKW4 1024 aaPredicted RBP15.43■□□□□ 0.06
TSEN54-204ENST00000577197 COPRSQ9NQ92 184 aa15.43■□□□□ 0.06
TSEN54-204ENST00000577197 RTL9Q8NET4 1388 aa15.42■□□□□ 0.06
TSEN54-204ENST00000577197 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
TSEN54-204ENST00000577197 NIP7Q9Y221 180 aaKnown RBP eCLIP15.42■□□□□ 0.06
TSEN54-204ENST00000577197 RIC1Q4ADV7 1423 aa15.42■□□□□ 0.06
TSEN54-204ENST00000577197 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
TSEN54-204ENST00000577197 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
TSEN54-204ENST00000577197 CSF1RP07333 972 aa15.41■□□□□ 0.06
TSEN54-204ENST00000577197 TM4SF1P30408 202 aa15.41■□□□□ 0.06
TSEN54-204ENST00000577197 FOXO4P98177 505 aa15.41■□□□□ 0.06
TSEN54-204ENST00000577197 NFIXQ14938 502 aa15.41■□□□□ 0.06
TSEN54-204ENST00000577197 TBC1D9BQ66K14 1250 aa15.41■□□□□ 0.06
TSEN54-204ENST00000577197 KIF1BPQ96EK5 621 aa15.41■□□□□ 0.06
TSEN54-204ENST00000577197 SETDB2Q96T68 719 aa15.41■□□□□ 0.06
TSEN54-204ENST00000577197 UTP14AQ9BVJ6 771 aaKnown RBP15.41■□□□□ 0.06
TSEN54-204ENST00000577197 LRRCC1Q9C099 1032 aa15.41■□□□□ 0.06
TSEN54-204ENST00000577197 PDGFDQ9GZP0 370 aaPredicted RBP15.41■□□□□ 0.06
TSEN54-204ENST00000577197 NYXQ9GZU5 481 aa15.41■□□□□ 0.06
TSEN54-204ENST00000577197 CARMIL3Q8ND23 1372 aa15.4■□□□□ 0.06
TSEN54-204ENST00000577197 ANKRD45Q5TZF3 282 aa15.4■□□□□ 0.06
TSEN54-204ENST00000577197 PDE8AO60658 829 aa15.39■□□□□ 0.05
TSEN54-204ENST00000577197 NTSR2O95665 410 aa15.39■□□□□ 0.05
TSEN54-204ENST00000577197 GPTP24298 496 aa15.39■□□□□ 0.05
TSEN54-204ENST00000577197 RFX5P48382 616 aaPredicted RBP15.39■□□□□ 0.05
TSEN54-204ENST00000577197 BICDL1Q6ZP65 573 aa15.39■□□□□ 0.05
TSEN54-204ENST00000577197 OSBPL3Q9H4L5 887 aa15.39■□□□□ 0.05
TSEN54-204ENST00000577197 TRMT112Q9UI30 125 aaKnown RBP15.39■□□□□ 0.05
TSEN54-204ENST00000577197 AOX1Q06278 1338 aa15.39■□□□□ 0.05
TSEN54-204ENST00000577197 SURF6O75683 361 aaKnown RBP15.38■□□□□ 0.05
TSEN54-204ENST00000577197 CIAO1O76071 339 aa15.38■□□□□ 0.05
TSEN54-204ENST00000577197 EPHA10Q5JZY3 1008 aa15.38■□□□□ 0.05
TSEN54-204ENST00000577197 SLC10A5Q5PT55 438 aa15.38■□□□□ 0.05
TSEN54-204ENST00000577197 MSL1Q68DK7 614 aa15.38■□□□□ 0.05
TSEN54-204ENST00000577197 DDX60Q8IY21 1712 aaKnown RBP15.37■□□□□ 0.05
TSEN54-204ENST00000577197 LRP5O75197 1615 aa15.37■□□□□ 0.05
TSEN54-204ENST00000577197 POLRMTO00411 1230 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms