RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 TAF1P21675 1872 aa15.91■□□□□ 0.14
PRPF8-215ENST00000576958 ERVV-1B6SEH8 477 aa15.9■□□□□ 0.14
PRPF8-215ENST00000576958 FZD9O00144 591 aa15.9■□□□□ 0.14
PRPF8-215ENST00000576958 ITGBL1O95965 494 aaPredicted RBP15.9■□□□□ 0.14
PRPF8-215ENST00000576958 RIPK4P57078 832 aa15.9■□□□□ 0.14
PRPF8-215ENST00000576958 MAP1SQ66K74 1059 aaPredicted RBP15.9■□□□□ 0.14
PRPF8-215ENST00000576958 KIF6Q6ZMV9 814 aa15.9■□□□□ 0.14
PRPF8-215ENST00000576958 PNISRQ8TF01 805 aaKnown RBP15.9■□□□□ 0.14
PRPF8-215ENST00000576958 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
PRPF8-215ENST00000576958 LAMB2P55268 1798 aa15.9■□□□□ 0.14
PRPF8-215ENST00000576958 NEUROD2Q15784 382 aa15.89■□□□□ 0.13
PRPF8-215ENST00000576958 RIC1Q4ADV7 1423 aa15.88■□□□□ 0.13
PRPF8-215ENST00000576958 RGL2O15211 777 aa15.88■□□□□ 0.13
PRPF8-215ENST00000576958 EPHX2P34913 555 aa15.88■□□□□ 0.13
PRPF8-215ENST00000576958 LDHDQ86WU2 507 aa15.88■□□□□ 0.13
PRPF8-215ENST00000576958 RTKN2Q8IZC4 609 aa15.88■□□□□ 0.13
PRPF8-215ENST00000576958 TNS4Q8IZW8 715 aa15.88■□□□□ 0.13
PRPF8-215ENST00000576958 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
PRPF8-215ENST00000576958 GJA3Q9Y6H8 435 aa15.88■□□□□ 0.13
PRPF8-215ENST00000576958 PPEF1O14829 653 aaPredicted RBP15.87■□□□□ 0.13
PRPF8-215ENST00000576958 ALDH1B1P30837 517 aa15.87■□□□□ 0.13
PRPF8-215ENST00000576958 HOXA10P31260 410 aaPredicted RBP15.87■□□□□ 0.13
PRPF8-215ENST00000576958 TMPOP42166 694 aaKnown RBP15.87■□□□□ 0.13
PRPF8-215ENST00000576958 AIMP1Q12904 312 aaKnown RBP15.87■□□□□ 0.13
PRPF8-215ENST00000576958 GIGYF2Q6Y7W6 1299 aaKnown RBP15.87■□□□□ 0.13
PRPF8-215ENST00000576958 RPGRQ92834 1020 aaKnown RBP15.87■□□□□ 0.13
PRPF8-215ENST00000576958 HACL1Q9UJ83 578 aa15.87■□□□□ 0.13
PRPF8-215ENST00000576958 CLEC11AQ9Y240 323 aa15.87■□□□□ 0.13
PRPF8-215ENST00000576958 ANKRD36CQ5JPF3 1778 aa15.86■□□□□ 0.13
PRPF8-215ENST00000576958 FOXN1O15353 648 aa15.86■□□□□ 0.13
PRPF8-215ENST00000576958 NEFMP07197 916 aa15.86■□□□□ 0.13
PRPF8-215ENST00000576958 HCLS1P14317 486 aaPredicted RBP15.86■□□□□ 0.13
PRPF8-215ENST00000576958 EPS15P42566 896 aa15.86■□□□□ 0.13
PRPF8-215ENST00000576958 VEGFBP49765 207 aa15.86■□□□□ 0.13
PRPF8-215ENST00000576958 DDX10Q13206 875 aaKnown RBP15.86■□□□□ 0.13
PRPF8-215ENST00000576958 XAGE3Q8WTP9 111 aa15.86■□□□□ 0.13
PRPF8-215ENST00000576958 PSMD1Q99460 953 aa15.86■□□□□ 0.13
PRPF8-215ENST00000576958 NYXQ9GZU5 481 aa15.86■□□□□ 0.13
PRPF8-215ENST00000576958 CNTNAP1P78357 1384 aa15.86■□□□□ 0.13
PRPF8-215ENST00000576958 IQCA1LA6NCM1 817 aa15.85■□□□□ 0.13
PRPF8-215ENST00000576958 SCNN1DP51172 638 aa15.85■□□□□ 0.13
PRPF8-215ENST00000576958 AOC3Q16853 763 aa15.85■□□□□ 0.13
PRPF8-215ENST00000576958 COPS6Q7L5N1 327 aa15.85■□□□□ 0.13
PRPF8-215ENST00000576958 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
PRPF8-215ENST00000576958 ABCC4O15439 1325 aa15.85■□□□□ 0.13
PRPF8-215ENST00000576958 IBTKQ9P2D0 1353 aaPredicted RBP15.85■□□□□ 0.13
PRPF8-215ENST00000576958 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
PRPF8-215ENST00000576958 TRAF5O00463 557 aa15.83■□□□□ 0.12
PRPF8-215ENST00000576958 CNTROBQ8N137 903 aa15.83■□□□□ 0.12
PRPF8-215ENST00000576958 GPC2Q8N158 579 aa15.83■□□□□ 0.12
PRPF8-215ENST00000576958 LARGE2Q8N3Y3 721 aa15.83■□□□□ 0.12
PRPF8-215ENST00000576958 RBM17Q96I25 401 aaKnown RBP15.83■□□□□ 0.12
PRPF8-215ENST00000576958 CRAMP1Q96RY5 1269 aa15.83■□□□□ 0.12
PRPF8-215ENST00000576958 SHTN1A0MZ66 631 aa15.82■□□□□ 0.12
PRPF8-215ENST00000576958 NLRP10Q86W26 655 aa15.82■□□□□ 0.12
PRPF8-215ENST00000576958 UTP14AQ9BVJ6 771 aaKnown RBP15.82■□□□□ 0.12
PRPF8-215ENST00000576958 CHPF2Q9P2E5 772 aa15.82■□□□□ 0.12
PRPF8-215ENST00000576958 TMEM88BA6NKF7 163 aa15.81■□□□□ 0.12
PRPF8-215ENST00000576958 ERBB4Q15303 1308 aa15.81■□□□□ 0.12
PRPF8-215ENST00000576958 DDX60Q8IY21 1712 aaKnown RBP15.81■□□□□ 0.12
PRPF8-215ENST00000576958 JDP2Q8WYK2 163 aa15.81■□□□□ 0.12
PRPF8-215ENST00000576958 DUOX1Q9NRD9 1551 aa15.81■□□□□ 0.12
PRPF8-215ENST00000576958 PPIP5K2O43314 1243 aa15.8■□□□□ 0.12
PRPF8-215ENST00000576958 DLK2Q6UY11 383 aa15.8■□□□□ 0.12
PRPF8-215ENST00000576958 PPP1R42Q7Z4L9 355 aa15.8■□□□□ 0.12
PRPF8-215ENST00000576958 CHL1O00533 1208 aa15.79■□□□□ 0.12
PRPF8-215ENST00000576958 EIF6P56537 245 aaKnown RBP15.79■□□□□ 0.12
PRPF8-215ENST00000576958 RALBP1Q15311 655 aa15.79■□□□□ 0.12
PRPF8-215ENST00000576958 RTL5Q5HYW3 569 aaPredicted RBP15.79■□□□□ 0.12
PRPF8-215ENST00000576958 SLC10A5Q5PT55 438 aa15.79■□□□□ 0.12
PRPF8-215ENST00000576958 NLRP3Q96P20 1036 aa15.79■□□□□ 0.12
PRPF8-215ENST00000576958 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
PRPF8-215ENST00000576958 ATP6V0A2Q9Y487 856 aa15.79■□□□□ 0.12
PRPF8-215ENST00000576958 ATP5J2-PTCD1G3V325 749 aa15.78■□□□□ 0.12
PRPF8-215ENST00000576958 CXCL9Q07325 125 aa15.78■□□□□ 0.12
PRPF8-215ENST00000576958 PARP10Q53GL7 1025 aa15.78■□□□□ 0.12
PRPF8-215ENST00000576958 NIM1KQ8IY84 436 aa15.78■□□□□ 0.12
PRPF8-215ENST00000576958 GPR101Q96P66 508 aaPredicted RBP15.78■□□□□ 0.12
PRPF8-215ENST00000576958 MYBBP1AQ9BQG0 1328 aaKnown RBP15.77■□□□□ 0.12
PRPF8-215ENST00000576958 YDJCA8MPS7 323 aa15.77■□□□□ 0.12
PRPF8-215ENST00000576958 GRM1Q13255 1194 aa15.77■□□□□ 0.12
PRPF8-215ENST00000576958 TCIRG1Q13488 830 aa15.77■□□□□ 0.12
PRPF8-215ENST00000576958 CST9Q5W186 159 aa15.77■□□□□ 0.12
PRPF8-215ENST00000576958 CC2D2BQ6DHV5 1058 aa15.77■□□□□ 0.12
PRPF8-215ENST00000576958 DDX21Q9NR30 783 aaKnown RBP eCLIP15.77■□□□□ 0.12
PRPF8-215ENST00000576958 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.12
PRPF8-215ENST00000576958 RAD17O75943 681 aa15.76■□□□□ 0.11
PRPF8-215ENST00000576958 GMPSP49915 693 aaPredicted RBP15.76■□□□□ 0.11
PRPF8-215ENST00000576958 PNMA8AQ86V59 439 aaPredicted RBP15.76■□□□□ 0.11
PRPF8-215ENST00000576958 FAM89AQ96GI7 184 aa15.76■□□□□ 0.11
PRPF8-215ENST00000576958 PNNQ9H307 717 aaKnown RBP15.76■□□□□ 0.11
PRPF8-215ENST00000576958 ABT1Q9ULW3 272 aaKnown RBP15.76■□□□□ 0.11
PRPF8-215ENST00000576958 LRRC37AA6NMS7 1700 aa15.75■□□□□ 0.11
PRPF8-215ENST00000576958 RASSF10A6NK89 507 aa15.75■□□□□ 0.11
PRPF8-215ENST00000576958 LMOD1P29536 600 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-215ENST00000576958 LBX1P52954 281 aa15.75■□□□□ 0.11
PRPF8-215ENST00000576958 HIRAP54198 1017 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-215ENST00000576958 HDGFL1Q5TGJ6 251 aa15.75■□□□□ 0.11
PRPF8-215ENST00000576958 CYP4F22Q6NT55 531 aa15.75■□□□□ 0.11
PRPF8-215ENST00000576958 TRPM4Q8TD43 1214 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 253.4 ms