RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 FOXD4L5Q5VV16 416 aaPredicted RBP16.99■□□□□ 0.31
RAB40B-211ENST00000576359 NBPF10Q6P3W6 841 aaKnown RBP16.99■□□□□ 0.31
RAB40B-211ENST00000576359 NBPF15Q8N660 670 aa16.99■□□□□ 0.31
RAB40B-211ENST00000576359 FOXD4L4Q8WXT5 416 aaPredicted RBP16.99■□□□□ 0.31
RAB40B-211ENST00000576359 EVI5LQ96CN4 794 aa16.99■□□□□ 0.31
RAB40B-211ENST00000576359 PAPPAQ13219 1627 aa16.99■□□□□ 0.31
RAB40B-211ENST00000576359 KCPQ6ZWJ8 1503 aa16.99■□□□□ 0.31
RAB40B-211ENST00000576359 PRPF40AO75400 957 aaKnown RBP16.99■□□□□ 0.31
RAB40B-211ENST00000576359 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
RAB40B-211ENST00000576359 INTS4Q96HW7 963 aaKnown RBP16.99■□□□□ 0.31
RAB40B-211ENST00000576359 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
RAB40B-211ENST00000576359 TTC14Q96N46 770 aa16.98■□□□□ 0.31
RAB40B-211ENST00000576359 CASP7P55210 303 aa16.98■□□□□ 0.31
RAB40B-211ENST00000576359 CAVIN1Q6NZI2 390 aaKnown RBP16.98■□□□□ 0.31
RAB40B-211ENST00000576359 KIAA1211Q6ZU35 1233 aa16.98■□□□□ 0.31
RAB40B-211ENST00000576359 COL15A1P39059 1388 aa16.97■□□□□ 0.31
RAB40B-211ENST00000576359 PTPN12Q05209 780 aaKnown RBP16.97■□□□□ 0.31
RAB40B-211ENST00000576359 RABL6Q3YEC7 729 aaPredicted RBP16.97■□□□□ 0.31
RAB40B-211ENST00000576359 PLBD2Q8NHP8 589 aa16.97■□□□□ 0.31
RAB40B-211ENST00000576359 NUP188Q5SRE5 1749 aa16.97■□□□□ 0.31
RAB40B-211ENST00000576359 BRD1O95696 1058 aa16.97■□□□□ 0.31
RAB40B-211ENST00000576359 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
RAB40B-211ENST00000576359 COPRSQ9NQ92 184 aa16.97■□□□□ 0.31
RAB40B-211ENST00000576359 FAM227BQ96M60 508 aa16.96■□□□□ 0.31
RAB40B-211ENST00000576359 A0A087WZG4 1122 aa16.96■□□□□ 0.3
RAB40B-211ENST00000576359 ERVV-2B6SEH9 535 aa16.96■□□□□ 0.3
RAB40B-211ENST00000576359 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.3
RAB40B-211ENST00000576359 BOLA2Q9H3K6 86 aa16.96■□□□□ 0.3
RAB40B-211ENST00000576359 IL2RBP14784 551 aa16.95■□□□□ 0.3
RAB40B-211ENST00000576359 CPA1P15085 419 aa16.95■□□□□ 0.3
RAB40B-211ENST00000576359 ZNF445P59923 1031 aa16.95■□□□□ 0.3
RAB40B-211ENST00000576359 TTLL7Q6ZT98 887 aa16.95■□□□□ 0.3
RAB40B-211ENST00000576359 GPT2Q8TD30 523 aa16.95■□□□□ 0.3
RAB40B-211ENST00000576359 CARD10Q9BWT7 1032 aa16.95■□□□□ 0.3
RAB40B-211ENST00000576359 ZSCAN23Q3MJ62 389 aa16.95■□□□□ 0.3
RAB40B-211ENST00000576359 ERBB4Q15303 1308 aa16.94■□□□□ 0.3
RAB40B-211ENST00000576359 AK2P54819 239 aa16.94■□□□□ 0.3
RAB40B-211ENST00000576359 NMIQ13287 307 aaPredicted RBP16.94■□□□□ 0.3
RAB40B-211ENST00000576359 STRN4Q9NRL3 753 aa16.94■□□□□ 0.3
RAB40B-211ENST00000576359 TJP1Q07157 1748 aa16.94■□□□□ 0.3
RAB40B-211ENST00000576359 TOGARAM1Q9Y4F4 1720 aa16.94■□□□□ 0.3
RAB40B-211ENST00000576359 A1BGP04217 495 aa16.94■□□□□ 0.3
RAB40B-211ENST00000576359 ADCK5Q3MIX3 580 aa16.94■□□□□ 0.3
RAB40B-211ENST00000576359 RUFY3Q7L099 469 aa16.94■□□□□ 0.3
RAB40B-211ENST00000576359 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
RAB40B-211ENST00000576359 LARP6Q9BRS8 491 aaKnown RBP16.94■□□□□ 0.3
RAB40B-211ENST00000576359 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
RAB40B-211ENST00000576359 KDM4FA0A1W2PPD8 638 aa16.93■□□□□ 0.3
RAB40B-211ENST00000576359 TFCP2Q12800 502 aa16.93■□□□□ 0.3
RAB40B-211ENST00000576359 PRPF40BQ6NWY9 871 aaKnown RBP16.93■□□□□ 0.3
RAB40B-211ENST00000576359 KCNB2Q92953 911 aa16.93■□□□□ 0.3
RAB40B-211ENST00000576359 DBNLQ9UJU6 430 aaKnown RBP16.93■□□□□ 0.3
RAB40B-211ENST00000576359 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
RAB40B-211ENST00000576359 A0A0D9SFI3 127 aa16.93■□□□□ 0.3
RAB40B-211ENST00000576359 CASTP20810 708 aaKnown RBP16.93■□□□□ 0.3
RAB40B-211ENST00000576359 NASPP49321 788 aaPredicted RBP16.93■□□□□ 0.3
RAB40B-211ENST00000576359 NECTIN1Q15223 517 aa16.93■□□□□ 0.3
RAB40B-211ENST00000576359 NHSL1Q5SYE7 1610 aa16.92■□□□□ 0.3
RAB40B-211ENST00000576359 FOXO4P98177 505 aa16.92■□□□□ 0.3
RAB40B-211ENST00000576359 TNNI3KQ59H18 835 aa16.92■□□□□ 0.3
RAB40B-211ENST00000576359 EDC3Q96F86 508 aaKnown RBP16.92■□□□□ 0.3
RAB40B-211ENST00000576359 SNRKQ9NRH2 765 aa16.92■□□□□ 0.3
RAB40B-211ENST00000576359 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
RAB40B-211ENST00000576359 FPGT-TNNI3KV9GXZ4 949 aa16.92■□□□□ 0.3
RAB40B-211ENST00000576359 H7C1W4 665 aa16.91■□□□□ 0.3
RAB40B-211ENST00000576359 LMBR1LQ6UX01 489 aa16.91■□□□□ 0.3
RAB40B-211ENST00000576359 FSD1Q9BTV5 496 aa16.91■□□□□ 0.3
RAB40B-211ENST00000576359 RPAP1Q9BWH6 1393 aaPredicted RBP16.91■□□□□ 0.3
RAB40B-211ENST00000576359 HIP1O00291 1037 aa16.91■□□□□ 0.3
RAB40B-211ENST00000576359 LARGE1O95461 756 aa16.91■□□□□ 0.3
RAB40B-211ENST00000576359 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
RAB40B-211ENST00000576359 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
RAB40B-211ENST00000576359 RBM8AQ9Y5S9 174 aaKnown RBP16.91■□□□□ 0.3
RAB40B-211ENST00000576359 MED23Q9ULK4 1368 aa16.9■□□□□ 0.3
RAB40B-211ENST00000576359 JAKMIP1Q96N16 626 aaKnown RBP16.9■□□□□ 0.3
RAB40B-211ENST00000576359 LIMCH1Q9UPQ0 1083 aa16.9■□□□□ 0.3
RAB40B-211ENST00000576359 COL9A3Q14050 684 aaPredicted RBP16.9■□□□□ 0.3
RAB40B-211ENST00000576359 ZSWIM6Q9HCJ5 1215 aa16.9■□□□□ 0.3
RAB40B-211ENST00000576359 ATP5JP18859 108 aa16.89■□□□□ 0.29
RAB40B-211ENST00000576359 CREB3L3Q68CJ9 461 aa16.89■□□□□ 0.29
RAB40B-211ENST00000576359 TRIM44Q96DX7 344 aaPredicted RBP16.89■□□□□ 0.29
RAB40B-211ENST00000576359 ZBTB3Q9H5J0 574 aa16.89■□□□□ 0.29
RAB40B-211ENST00000576359 TMEM63CQ9P1W3 806 aa16.89■□□□□ 0.29
RAB40B-211ENST00000576359 NDUFB9Q9Y6M9 179 aa16.89■□□□□ 0.29
RAB40B-211ENST00000576359 ZNF589Q86UQ0 364 aaPredicted RBP16.89■□□□□ 0.29
RAB40B-211ENST00000576359 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
RAB40B-211ENST00000576359 EVA1CP58658 441 aa16.88■□□□□ 0.29
RAB40B-211ENST00000576359 DBNDD2Q9BQY9 259 aa16.88■□□□□ 0.29
RAB40B-211ENST00000576359 CWC25Q9NXE8 425 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-211ENST00000576359 TCHHQ07283 1943 aa16.88■□□□□ 0.29
RAB40B-211ENST00000576359 PRIM1P49642 420 aaKnown RBP16.88■□□□□ 0.29
RAB40B-211ENST00000576359 FOXD4L6Q3SYB3 417 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-211ENST00000576359 FOXD4L3Q6VB84 417 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-211ENST00000576359 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-211ENST00000576359 WDR33Q9C0J8 1336 aaKnown RBP16.88■□□□□ 0.29
RAB40B-211ENST00000576359 JCADQ9P266 1359 aa16.87■□□□□ 0.29
RAB40B-211ENST00000576359 SLC27A2O14975 620 aa16.87■□□□□ 0.29
RAB40B-211ENST00000576359 MBD3O95983 291 aa16.87■□□□□ 0.29
RAB40B-211ENST00000576359 CLCN1P35523 988 aa16.87■□□□□ 0.29
RAB40B-211ENST00000576359 CCDC173Q0VFZ6 552 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms