RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 C4AP0C0L4 1744 aa14.92□□□□□ -0.02
PRPF8-212ENST00000575116 SMIM5Q71RC9 77 aa14.92□□□□□ -0.02
PRPF8-212ENST00000575116 PPP1R42Q7Z4L9 355 aa14.92□□□□□ -0.02
PRPF8-212ENST00000575116 ZBTB38Q8NAP3 1195 aaPredicted RBP14.92□□□□□ -0.02
PRPF8-212ENST00000575116 CCDC136Q96JN2 1154 aa14.92□□□□□ -0.02
PRPF8-212ENST00000575116 SRP68Q9UHB9 627 aaKnown RBP14.92□□□□□ -0.02
PRPF8-212ENST00000575116 NIP7Q9Y221 180 aaKnown RBP eCLIP14.92□□□□□ -0.02
PRPF8-212ENST00000575116 PCDHB15Q9Y5E8 787 aa14.92□□□□□ -0.02
PRPF8-212ENST00000575116 QSER1Q2KHR3 1735 aa14.92□□□□□ -0.02
PRPF8-212ENST00000575116 CASP7P55210 303 aa14.91□□□□□ -0.02
PRPF8-212ENST00000575116 RWDD1Q9H446 243 aaPredicted RBP14.91□□□□□ -0.02
PRPF8-212ENST00000575116 PNPLA7Q6ZV29 1317 aa14.91□□□□□ -0.02
PRPF8-212ENST00000575116 GYS1P13807 737 aa14.9□□□□□ -0.02
PRPF8-212ENST00000575116 GPTP24298 496 aa14.9□□□□□ -0.02
PRPF8-212ENST00000575116 HDAC1Q13547 482 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-212ENST00000575116 COL23A1Q86Y22 540 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-212ENST00000575116 ANKRD44Q8N8A2 993 aa14.9□□□□□ -0.02
PRPF8-212ENST00000575116 SETDB2Q96T68 719 aa14.9□□□□□ -0.02
PRPF8-212ENST00000575116 UTP14AQ9BVJ6 771 aaKnown RBP14.9□□□□□ -0.02
PRPF8-212ENST00000575116 UBN2Q6ZU65 1347 aa14.9□□□□□ -0.02
PRPF8-212ENST00000575116 CDHR2Q9BYE9 1310 aa14.9□□□□□ -0.02
PRPF8-212ENST00000575116 TUBGCP6Q96RT7 1819 aa14.89□□□□□ -0.03
PRPF8-212ENST00000575116 HSP90B1P14625 803 aaKnown RBP14.89□□□□□ -0.03
PRPF8-212ENST00000575116 ATP8B2P98198 1209 aa14.89□□□□□ -0.03
PRPF8-212ENST00000575116 SUSD4Q5VX71 490 aa14.89□□□□□ -0.03
PRPF8-212ENST00000575116 TBC1D9BQ66K14 1250 aa14.89□□□□□ -0.03
PRPF8-212ENST00000575116 CEP85Q6P2H3 762 aa14.89□□□□□ -0.03
PRPF8-212ENST00000575116 UBE3BQ7Z3V4 1068 aa14.89□□□□□ -0.03
PRPF8-212ENST00000575116 NLGN1Q8N2Q7 840 aa14.89□□□□□ -0.03
PRPF8-212ENST00000575116 PLA2G12BQ9BX93 195 aa14.89□□□□□ -0.03
PRPF8-212ENST00000575116 NYXQ9GZU5 481 aa14.89□□□□□ -0.03
PRPF8-212ENST00000575116 ANO8Q9HCE9 1232 aaPredicted RBP14.89□□□□□ -0.03
PRPF8-212ENST00000575116 TRMT112Q9UI30 125 aaKnown RBP14.89□□□□□ -0.03
PRPF8-212ENST00000575116 LRRFIP2Q9Y608 721 aaKnown RBP14.89□□□□□ -0.03
PRPF8-212ENST00000575116 TM4SF1P30408 202 aa14.88□□□□□ -0.03
PRPF8-212ENST00000575116 MTX1Q13505 466 aa14.88□□□□□ -0.03
PRPF8-212ENST00000575116 SUCLG2Q96I99 432 aa14.88□□□□□ -0.03
PRPF8-212ENST00000575116 C1orf115Q9H7X2 142 aa14.88□□□□□ -0.03
PRPF8-212ENST00000575116 HMMRO75330 724 aa14.87□□□□□ -0.03
PRPF8-212ENST00000575116 NTSR2O95665 410 aa14.87□□□□□ -0.03
PRPF8-212ENST00000575116 B4GALNT3Q6L9W6 998 aa14.87□□□□□ -0.03
PRPF8-212ENST00000575116 FAM89AQ96GI7 184 aa14.87□□□□□ -0.03
PRPF8-212ENST00000575116 KAZALD1Q96I82 304 aa14.87□□□□□ -0.03
PRPF8-212ENST00000575116 SH3TC1Q8TE82 1336 aa14.87□□□□□ -0.03
PRPF8-212ENST00000575116 MSH5O43196 834 aa14.86□□□□□ -0.03
PRPF8-212ENST00000575116 NFIXQ14938 502 aa14.86□□□□□ -0.03
PRPF8-212ENST00000575116 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
PRPF8-212ENST00000575116 TPTE2Q6XPS3 522 aa14.86□□□□□ -0.03
PRPF8-212ENST00000575116 BICDL1Q6ZP65 573 aa14.86□□□□□ -0.03
PRPF8-212ENST00000575116 SIRT2Q8IXJ6 389 aa14.86□□□□□ -0.03
PRPF8-212ENST00000575116 SLC16A10Q8TF71 515 aa14.86□□□□□ -0.03
PRPF8-212ENST00000575116 BICC1Q9H694 974 aaKnown RBP14.86□□□□□ -0.03
PRPF8-212ENST00000575116 CARMIL3Q8ND23 1372 aa14.85□□□□□ -0.03
PRPF8-212ENST00000575116 IRS4O14654 1257 aaPredicted RBP14.85□□□□□ -0.03
PRPF8-212ENST00000575116 PDE8AO60658 829 aa14.85□□□□□ -0.03
PRPF8-212ENST00000575116 IGHDP01880 384 aa14.85□□□□□ -0.03
PRPF8-212ENST00000575116 FOXO4P98177 505 aa14.85□□□□□ -0.03
PRPF8-212ENST00000575116 SLC10A5Q5PT55 438 aa14.85□□□□□ -0.03
PRPF8-212ENST00000575116 ILDR2Q71H61 639 aa14.85□□□□□ -0.03
PRPF8-212ENST00000575116 CENPQQ7L2Z9 268 aaPredicted RBP14.85□□□□□ -0.03
PRPF8-212ENST00000575116 SSH3Q8TE77 659 aa14.85□□□□□ -0.03
PRPF8-212ENST00000575116 JARID2Q92833 1246 aaPredicted RBP14.85□□□□□ -0.03
PRPF8-212ENST00000575116 COL24A1Q17RW2 1714 aa14.85□□□□□ -0.03
PRPF8-212ENST00000575116 POLA2Q14181 598 aa14.84□□□□□ -0.03
PRPF8-212ENST00000575116 NBPF5PQ86XG9 351 aaPredicted RBP14.84□□□□□ -0.03
PRPF8-212ENST00000575116 KDM2BQ8NHM5 1336 aa14.84□□□□□ -0.03
PRPF8-212ENST00000575116 SRGAP3O43295 1099 aa14.83□□□□□ -0.04
PRPF8-212ENST00000575116 CSF1RP07333 972 aa14.83□□□□□ -0.04
PRPF8-212ENST00000575116 RTL5Q5HYW3 569 aaPredicted RBP14.83□□□□□ -0.04
PRPF8-212ENST00000575116 EPHA10Q5JZY3 1008 aa14.83□□□□□ -0.04
PRPF8-212ENST00000575116 GCC1Q96CN9 775 aa14.83□□□□□ -0.04
PRPF8-212ENST00000575116 DCTPP1Q9H773 170 aa14.83□□□□□ -0.04
PRPF8-212ENST00000575116 PNMA6EA0A0J9YXQ4 647 aa14.82□□□□□ -0.04
PRPF8-212ENST00000575116 FAM177BA6PVY3 158 aa14.82□□□□□ -0.04
PRPF8-212ENST00000575116 SERPINB2P05120 415 aa14.82□□□□□ -0.04
PRPF8-212ENST00000575116 GTF2E1P29083 439 aaPredicted RBP14.82□□□□□ -0.04
PRPF8-212ENST00000575116 LMBR1LQ6UX01 489 aa14.82□□□□□ -0.04
PRPF8-212ENST00000575116 SMC5Q8IY18 1101 aa14.82□□□□□ -0.04
PRPF8-212ENST00000575116 SYNE4Q8N205 404 aa14.82□□□□□ -0.04
PRPF8-212ENST00000575116 POLRMTO00411 1230 aaKnown RBP14.81□□□□□ -0.04
PRPF8-212ENST00000575116 CTSWP56202 376 aa14.81□□□□□ -0.04
PRPF8-212ENST00000575116 ERFEQ4G0M1 354 aa14.81□□□□□ -0.04
PRPF8-212ENST00000575116 RIC1Q4ADV7 1423 aa14.81□□□□□ -0.04
PRPF8-212ENST00000575116 HSP90AB4PQ58FF6 505 aa14.8□□□□□ -0.04
PRPF8-212ENST00000575116 NUTM1Q86Y26 1132 aa14.8□□□□□ -0.04
PRPF8-212ENST00000575116 CNBD1Q8NA66 436 aa14.8□□□□□ -0.04
PRPF8-212ENST00000575116 TTLL11Q8NHH1 800 aa14.8□□□□□ -0.04
PRPF8-212ENST00000575116 PARP3Q9Y6F1 533 aa14.8□□□□□ -0.04
PRPF8-212ENST00000575116 LAMB2P55268 1798 aa14.8□□□□□ -0.04
PRPF8-212ENST00000575116 NPHP1O15259 732 aa14.79□□□□□ -0.04
PRPF8-212ENST00000575116 MYH3P11055 1940 aa14.79□□□□□ -0.04
PRPF8-212ENST00000575116 HCLS1P14317 486 aaPredicted RBP14.79□□□□□ -0.04
PRPF8-212ENST00000575116 ST5P78524 1137 aa14.79□□□□□ -0.04
PRPF8-212ENST00000575116 DDR1Q08345 913 aa14.79□□□□□ -0.04
PRPF8-212ENST00000575116 SF3B3Q15393 1217 aaKnown RBP14.79□□□□□ -0.04
PRPF8-212ENST00000575116 NLRP3Q96P20 1036 aa14.79□□□□□ -0.04
PRPF8-212ENST00000575116 NOP58Q9Y2X3 529 aaKnown RBP14.79□□□□□ -0.04
PRPF8-212ENST00000575116 DDX60Q8IY21 1712 aaKnown RBP14.78□□□□□ -0.04
PRPF8-212ENST00000575116 RTL9Q8NET4 1388 aa14.78□□□□□ -0.04
PRPF8-212ENST00000575116 RAB11FIP3O75154 756 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms