RNA–Protein interactions for RNA: ENST00000574744.1

TOM1L1-219, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-219ENST00000574744 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 TRIM28Q13263 835 aaKnown RBP11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 TTC22Q5TAA0 569 aa11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 ERC1Q8IUD2 1116 aa11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 MARCH10Q8NA82 808 aaPredicted RBP11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 KIF1BPQ96EK5 621 aa11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 IPO9Q96P70 1041 aaKnown RBP11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 MYD88Q99836 296 aa11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 SALL3Q9BXA9 1300 aa11.51□□□□□ -0.57
TOM1L1-219ENST00000574744 A1BGP04217 495 aa11.5□□□□□ -0.57
TOM1L1-219ENST00000574744 PRIM1P49642 420 aaKnown RBP11.5□□□□□ -0.57
TOM1L1-219ENST00000574744 CCDC191Q8NCU4 936 aa11.5□□□□□ -0.57
TOM1L1-219ENST00000574744 C8orf37Q96NL8 207 aa11.5□□□□□ -0.57
TOM1L1-219ENST00000574744 STAP2Q9UGK3 403 aa11.5□□□□□ -0.57
TOM1L1-219ENST00000574744 CCDC9Q9Y3X0 531 aaKnown RBP11.5□□□□□ -0.57
TOM1L1-219ENST00000574744 CYP19A1P11511 503 aaPredicted RBP11.49□□□□□ -0.57
TOM1L1-219ENST00000574744 RABL6Q3YEC7 729 aaPredicted RBP11.49□□□□□ -0.57
TOM1L1-219ENST00000574744 HSP90AB3PQ58FF7 597 aa11.49□□□□□ -0.57
TOM1L1-219ENST00000574744 DNAJC10Q8IXB1 793 aa11.49□□□□□ -0.57
TOM1L1-219ENST00000574744 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
TOM1L1-219ENST00000574744 USP21Q9UK80 565 aa11.49□□□□□ -0.57
TOM1L1-219ENST00000574744 EXOC6BQ9Y2D4 811 aa11.49□□□□□ -0.57
TOM1L1-219ENST00000574744 ATRNO75882 1429 aa11.49□□□□□ -0.57
TOM1L1-219ENST00000574744 TUBGCP6Q96RT7 1819 aa11.49□□□□□ -0.57
TOM1L1-219ENST00000574744 H7C1W4 665 aa11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 CDC45O75419 566 aa11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 IL6STP40189 918 aaPredicted RBP11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 CASP7P55210 303 aa11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 KIF6Q6ZMV9 814 aa11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 ISCA1Q9BUE6 129 aa11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 CWC25Q9NXE8 425 aaPredicted RBP11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 USP42Q9H9J4 1324 aaKnown RBP11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 ANKRD36CQ5JPF3 1778 aa11.48□□□□□ -0.57
TOM1L1-219ENST00000574744 NHSQ6T4R5 1651 aa11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 ERVV-1B6SEH8 477 aa11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 ONECUT3O60422 494 aaPredicted RBP11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 SURF6O75683 361 aaKnown RBP11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 HSPA1LP34931 641 aa11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 PDE1AP54750 535 aa11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 TTLL7Q6ZT98 887 aa11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 RHPN1Q8TCX5 695 aa11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 TBC1D32Q96NH3 1257 aa11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 SLC4A9Q96Q91 983 aa11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
TOM1L1-219ENST00000574744 MAP3K15Q6ZN16 1313 aa11.46□□□□□ -0.57
TOM1L1-219ENST00000574744 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
TOM1L1-219ENST00000574744 MX1P20591 662 aa11.46□□□□□ -0.57
TOM1L1-219ENST00000574744 TCIRG1Q13488 830 aa11.46□□□□□ -0.57
TOM1L1-219ENST00000574744 FAM98CQ17RN3 349 aaKnown RBP11.46□□□□□ -0.57
TOM1L1-219ENST00000574744 SYTL4Q96C24 671 aaPredicted RBP11.46□□□□□ -0.57
TOM1L1-219ENST00000574744 BICC1Q9H694 974 aaKnown RBP11.46□□□□□ -0.57
TOM1L1-219ENST00000574744 COPRSQ9NQ92 184 aa11.46□□□□□ -0.57
TOM1L1-219ENST00000574744 COL5A3P25940 1745 aaPredicted RBP11.46□□□□□ -0.58
TOM1L1-219ENST00000574744 PALLDQ8WX93 1383 aa11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 TTC41PQ6P2S7 1318 aa11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 A0A087WZG4 1122 aa11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 SMARCA5O60264 1052 aaPredicted RBP11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 PIP4K2AP48426 406 aaPredicted RBP11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 CLCN6P51797 869 aa11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 CASC1Q6TDU7 716 aa11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 GIGYF2Q6Y7W6 1299 aaKnown RBP11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 C16orf71Q8IYS4 520 aaPredicted RBP11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 PLA2G12BQ9BX93 195 aa11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 TRPC5Q9UL62 973 aaPredicted RBP11.45□□□□□ -0.58
TOM1L1-219ENST00000574744 CDHR2Q9BYE9 1310 aa11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 LOC102724428A0A0B4J2F2 783 aa11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 SEC24BO95487 1268 aa11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 SIK1P57059 783 aa11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 MEX3CQ5U5Q3 659 aaKnown RBP11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 TBC1D9Q6ZT07 1266 aa11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 PAXIP1Q6ZW49 1069 aaPredicted RBP11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 UBE3BQ7Z3V4 1068 aa11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 NPM2Q86SE8 214 aaKnown RBP11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 CLASRPQ8N2M8 674 aaKnown RBP11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 GJD4Q96KN9 370 aaPredicted RBP11.44□□□□□ -0.58
TOM1L1-219ENST00000574744 AFF2P51816 1311 aa11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 EPB41L2O43491 1005 aaKnown RBP11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 PCCAP05165 728 aaPredicted RBP11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 RFX5P48382 616 aaPredicted RBP11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 RBM25P49756 843 aaKnown RBP11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 EIF5P55010 431 aaKnown RBP11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 OS9Q13438 667 aaPredicted RBP11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 OTUD7AQ8TE49 926 aaPredicted RBP11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 CCDC87Q9NVE4 849 aa11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 ZBTB1Q9Y2K1 713 aa11.43□□□□□ -0.58
TOM1L1-219ENST00000574744 NUP98P52948 1817 aa11.42□□□□□ -0.58
TOM1L1-219ENST00000574744 ATP5J2-PTCD1G3V325 749 aa11.42□□□□□ -0.58
TOM1L1-219ENST00000574744 APBB1O00213 710 aa11.42□□□□□ -0.58
TOM1L1-219ENST00000574744 ERC2O15083 957 aa11.42□□□□□ -0.58
TOM1L1-219ENST00000574744 GABBR2O75899 941 aa11.42□□□□□ -0.58
TOM1L1-219ENST00000574744 SDSP20132 328 aa11.42□□□□□ -0.58
TOM1L1-219ENST00000574744 ATP6V1AP38606 617 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms