RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 KAZALD1Q96I82 304 aa22.77■■□□□ 1.24
SCARF1-206ENST00000573852 PLEKHO1Q53GL0 409 aaPredicted RBP22.77■■□□□ 1.24
SCARF1-206ENST00000573852 EAF2Q96CJ1 260 aaPredicted RBP22.77■■□□□ 1.24
SCARF1-206ENST00000573852 SUCLG2Q96I99 432 aa22.76■■□□□ 1.23
SCARF1-206ENST00000573852 KCNJ4P48050 445 aa22.76■■□□□ 1.23
SCARF1-206ENST00000573852 PLCB2Q00722 1185 aa22.76■■□□□ 1.23
SCARF1-206ENST00000573852 CCDC8Q9H0W5 538 aaPredicted RBP22.76■■□□□ 1.23
SCARF1-206ENST00000573852 PXDNQ92626 1479 aa22.75■■□□□ 1.23
SCARF1-206ENST00000573852 SLC27A2O14975 620 aa22.75■■□□□ 1.23
SCARF1-206ENST00000573852 LARP1BQ659C4 914 aaKnown RBP22.75■■□□□ 1.23
SCARF1-206ENST00000573852 MYRIPQ8NFW9 859 aa22.75■■□□□ 1.23
SCARF1-206ENST00000573852 RBM33Q96EV2 1170 aaKnown RBP22.75■■□□□ 1.23
SCARF1-206ENST00000573852 BICC1Q9H694 974 aaKnown RBP22.75■■□□□ 1.23
SCARF1-206ENST00000573852 TLR7Q9NYK1 1049 aaKnown RBP22.75■■□□□ 1.23
SCARF1-206ENST00000573852 TTC6Q86TZ1 520 aa22.74■■□□□ 1.23
SCARF1-206ENST00000573852 GRM8O00222 908 aa22.74■■□□□ 1.23
SCARF1-206ENST00000573852 FERMT3Q86UX7 667 aa22.74■■□□□ 1.23
SCARF1-206ENST00000573852 A0A0D9SFI3 127 aa22.73■■□□□ 1.23
SCARF1-206ENST00000573852 FAM173BQ6P4H8 233 aa22.73■■□□□ 1.23
SCARF1-206ENST00000573852 CDC37L1Q7L3B6 337 aa22.73■■□□□ 1.23
SCARF1-206ENST00000573852 KLHL34Q8N239 644 aa22.73■■□□□ 1.23
SCARF1-206ENST00000573852 JARID2Q92833 1246 aaPredicted RBP22.73■■□□□ 1.23
SCARF1-206ENST00000573852 TCEANC2Q96MN5 208 aa22.73■■□□□ 1.23
SCARF1-206ENST00000573852 TAF6LQ9Y6J9 622 aa22.73■■□□□ 1.23
SCARF1-206ENST00000573852 HEG1Q9ULI3 1381 aa22.73■■□□□ 1.23
SCARF1-206ENST00000573852 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
SCARF1-206ENST00000573852 LINS1Q8NG48 757 aa22.73■■□□□ 1.23
SCARF1-206ENST00000573852 G3BP1Q13283 466 aaKnown RBP eCLIP22.72■■□□□ 1.23
SCARF1-206ENST00000573852 C1orf141Q5JVX7 400 aa22.72■■□□□ 1.23
SCARF1-206ENST00000573852 SPTLC3Q9NUV7 552 aa22.72■■□□□ 1.23
SCARF1-206ENST00000573852 HDAC5Q9UQL6 1122 aa22.72■■□□□ 1.23
SCARF1-206ENST00000573852 AMOTQ4VCS5 1084 aa22.72■■□□□ 1.23
SCARF1-206ENST00000573852 BOLA2Q9H3K6 86 aa22.72■■□□□ 1.23
SCARF1-206ENST00000573852 SNRKQ9NRH2 765 aa22.72■■□□□ 1.23
SCARF1-206ENST00000573852 HIP1O00291 1037 aa22.71■■□□□ 1.23
SCARF1-206ENST00000573852 CHMP3Q9Y3E7 222 aa22.71■■□□□ 1.23
SCARF1-206ENST00000573852 UTYO14607 1347 aa22.71■■□□□ 1.23
SCARF1-206ENST00000573852 PSMA5P28066 241 aa22.71■■□□□ 1.23
SCARF1-206ENST00000573852 PSME1Q06323 249 aa22.71■■□□□ 1.23
SCARF1-206ENST00000573852 AIMP1Q12904 312 aaKnown RBP22.71■■□□□ 1.23
SCARF1-206ENST00000573852 KCNH5Q8NCM2 988 aa22.71■■□□□ 1.23
SCARF1-206ENST00000573852 SIL1Q9H173 461 aa22.71■■□□□ 1.23
SCARF1-206ENST00000573852 ADGRL3Q9HAR2 1447 aa22.7■■□□□ 1.23
SCARF1-206ENST00000573852 LIG1P18858 919 aa22.7■■□□□ 1.22
SCARF1-206ENST00000573852 KRT85P78386 507 aa22.7■■□□□ 1.22
SCARF1-206ENST00000573852 NPHP4O75161 1426 aaPredicted RBP22.7■■□□□ 1.22
SCARF1-206ENST00000573852 CCDC192P0DO97 292 aa22.7■■□□□ 1.22
SCARF1-206ENST00000573852 PRIMPOLQ96LW4 560 aa22.7■■□□□ 1.22
SCARF1-206ENST00000573852 KCNF1Q9H3M0 494 aa22.7■■□□□ 1.22
SCARF1-206ENST00000573852 FSD1Q9BTV5 496 aa22.69■■□□□ 1.22
SCARF1-206ENST00000573852 BLOC1S2Q6QNY1 142 aa22.69■■□□□ 1.22
SCARF1-206ENST00000573852 MTERF4Q7Z6M4 381 aaKnown RBP22.69■■□□□ 1.22
SCARF1-206ENST00000573852 KLHDC4Q8TBB5 520 aa22.69■■□□□ 1.22
SCARF1-206ENST00000573852 TSC1Q92574 1164 aa22.69■■□□□ 1.22
SCARF1-206ENST00000573852 NCAPD2Q15021 1401 aa22.68■■□□□ 1.22
SCARF1-206ENST00000573852 RPS6KB1P23443 525 aa22.68■■□□□ 1.22
SCARF1-206ENST00000573852 TOB2Q14106 344 aaPredicted RBP22.68■■□□□ 1.22
SCARF1-206ENST00000573852 CAMK4Q16566 473 aa22.68■■□□□ 1.22
SCARF1-206ENST00000573852 ESCO1Q5FWF5 840 aa22.68■■□□□ 1.22
SCARF1-206ENST00000573852 ARID3AQ99856 593 aa22.68■■□□□ 1.22
SCARF1-206ENST00000573852 ZNF589Q86UQ0 364 aaPredicted RBP22.67■■□□□ 1.22
SCARF1-206ENST00000573852 SPC24Q8NBT2 197 aa22.67■■□□□ 1.22
SCARF1-206ENST00000573852 ELP1O95163 1332 aa22.67■■□□□ 1.22
SCARF1-206ENST00000573852 IGKV5-2P06315 115 aa22.67■■□□□ 1.22
SCARF1-206ENST00000573852 PDIA6Q15084 440 aa22.67■■□□□ 1.22
SCARF1-206ENST00000573852 PYCARDQ9ULZ3 195 aa22.67■■□□□ 1.22
SCARF1-206ENST00000573852 MED23Q9ULK4 1368 aa22.67■■□□□ 1.22
SCARF1-206ENST00000573852 PDCP20941 246 aa22.66■■□□□ 1.22
SCARF1-206ENST00000573852 RNF20Q5VTR2 975 aa22.66■■□□□ 1.22
SCARF1-206ENST00000573852 KIAA1524Q8TCG1 905 aa22.66■■□□□ 1.22
SCARF1-206ENST00000573852 NUP62CLQ9H1M0 184 aa22.66■■□□□ 1.22
SCARF1-206ENST00000573852 DDX21Q9NR30 783 aaKnown RBP eCLIP22.66■■□□□ 1.22
SCARF1-206ENST00000573852 HMGN5P82970 282 aaKnown RBP22.66■■□□□ 1.22
SCARF1-206ENST00000573852 MAP3K11Q16584 847 aa22.66■■□□□ 1.22
SCARF1-206ENST00000573852 LARP1Q6PKG0 1096 aaKnown RBP22.66■■□□□ 1.22
SCARF1-206ENST00000573852 MRVI1Q9Y6F6 885 aa22.66■■□□□ 1.22
SCARF1-206ENST00000573852 PHRF1Q9P1Y6 1649 aaKnown RBP22.66■■□□□ 1.22
SCARF1-206ENST00000573852 ANKRD1Q15327 319 aa22.65■■□□□ 1.22
SCARF1-206ENST00000573852 TFIP11Q9UBB9 837 aaKnown RBP22.65■■□□□ 1.22
SCARF1-206ENST00000573852 OVOS2A0A0G2JMS6 1433 aa22.65■■□□□ 1.22
SCARF1-206ENST00000573852 DDX58O95786 925 aaKnown RBP22.65■■□□□ 1.22
SCARF1-206ENST00000573852 EDC3Q96F86 508 aaKnown RBP22.65■■□□□ 1.22
SCARF1-206ENST00000573852 ALDH8A1Q9H2A2 487 aaPredicted RBP22.65■■□□□ 1.22
SCARF1-206ENST00000573852 FER1L4A9Z1Z3 1794 aa22.65■■□□□ 1.22
SCARF1-206ENST00000573852 GCP02774 474 aa22.65■■□□□ 1.22
SCARF1-206ENST00000573852 PDIA4P13667 645 aaKnown RBP22.65■■□□□ 1.22
SCARF1-206ENST00000573852 GTF2F1P35269 517 aaKnown RBP eCLIP22.65■■□□□ 1.223e-7■■■■■ 35.7
SCARF1-206ENST00000573852 TYRO3Q06418 890 aa22.65■■□□□ 1.22
SCARF1-206ENST00000573852 STK3Q13188 491 aa22.65■■□□□ 1.22
SCARF1-206ENST00000573852 ARHGEF25Q86VW2 580 aa22.65■■□□□ 1.22
SCARF1-206ENST00000573852 FAM200AQ8TCP9 573 aa22.65■■□□□ 1.22
SCARF1-206ENST00000573852 ANKRD24Q8TF21 1146 aa22.64■■□□□ 1.21
SCARF1-206ENST00000573852 DACT1Q9NYF0 836 aa22.64■■□□□ 1.21
SCARF1-206ENST00000573852 EPHA10Q5JZY3 1008 aa22.63■■□□□ 1.21
SCARF1-206ENST00000573852 CKAP2LQ8IYA6 745 aa22.63■■□□□ 1.21
SCARF1-206ENST00000573852 ZNF710Q8N1W2 664 aa22.63■■□□□ 1.21
SCARF1-206ENST00000573852 JCADQ9P266 1359 aa22.63■■□□□ 1.21
SCARF1-206ENST00000573852 TAF5LO75529 589 aa22.63■■□□□ 1.21
SCARF1-206ENST00000573852 RIC3Q7Z5B4 369 aa22.63■■□□□ 1.21
SCARF1-206ENST00000573852 LUZP1Q86V48 1076 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms