RNA–Protein interactions for RNA: ENST00000573674.1

SLC52A1-204, Transcript of solute carrier family 52 member 1, humanhuman

TSL 2

Gene SLC52A1, Length 2,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-204ENST00000573674 TDRD7Q8NHU6 1098 aaKnown RBP17.47■□□□□ 0.39
SLC52A1-204ENST00000573674 LSG1Q9H089 658 aaKnown RBP17.47■□□□□ 0.39
SLC52A1-204ENST00000573674 CACTINQ8WUQ7 758 aaKnown RBP17.47■□□□□ 0.39
SLC52A1-204ENST00000573674 TIGD1Q96MW7 591 aa17.47■□□□□ 0.39
SLC52A1-204ENST00000573674 MAP3K5Q99683 1374 aa17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 NECTIN2Q92692 538 aa17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 TRIM5Q9C035 493 aa17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 ELP1O95163 1332 aa17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 LIG1P18858 919 aa17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 ANO6Q4KMQ2 910 aa17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 KRT28Q7Z3Y7 464 aa17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 DDX17Q92841 729 aaKnown RBP17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
SLC52A1-204ENST00000573674 GNAI3P08754 354 aa17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 CCDC83Q8IWF9 413 aa17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 PLCD3Q8N3E9 789 aa17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 C19orf44Q9H6X5 657 aa17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 CCDC171Q6TFL3 1326 aa17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 SLC20A2Q08357 652 aa17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 CAMK4Q16566 473 aa17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 SLFNL1Q499Z3 407 aa17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 RBM43Q6ZSC3 357 aaKnown RBP17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 CREBRFQ8IUR6 639 aa17.45■□□□□ 0.38
SLC52A1-204ENST00000573674 CDK11BP21127 795 aaKnown RBP17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 CDC25BP30305 580 aa17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 ARHGEF25Q86VW2 580 aa17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 HSPA2P54652 639 aa17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 KRT85P78386 507 aa17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 ZSCAN31Q96LW9 406 aaPredicted RBP17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 SH2B1Q9NRF2 756 aaPredicted RBP17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 ZNF215Q9UL58 517 aaPredicted RBP17.44■□□□□ 0.38
SLC52A1-204ENST00000573674 VPS37CA5D8V6 355 aaPredicted RBP17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 TNMDQ9H2S6 317 aa17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 CALCOCO1Q9P1Z2 691 aa17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 RBM6P78332 1123 aaKnown RBP17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 CCDC144BQ3MJ40 725 aa17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 NYAP1Q6ZVC0 841 aa17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 CCDC144CPQ8IYA2 1237 aa17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 CKAP2LQ8IYA6 745 aa17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 AXIN2Q9Y2T1 843 aa17.43■□□□□ 0.38
SLC52A1-204ENST00000573674 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 ZNF592Q92610 1267 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 ERO1AQ96HE7 468 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 DDX19AQ9NUU7 478 aaKnown RBP17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 RGPD2P0DJD1 1756 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 LRRC37A3O60309 1634 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 TULP2O00295 520 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 CPA1P15085 419 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 ST3GAL1Q11201 340 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 FBXO38Q6PIJ6 1188 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 DACT1Q9NYF0 836 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
SLC52A1-204ENST00000573674 PI4K2BQ8TCG2 481 aa17.41■□□□□ 0.38
SLC52A1-204ENST00000573674 CLSTN2Q9H4D0 955 aa17.41■□□□□ 0.38
SLC52A1-204ENST00000573674 CHMP3Q9Y3E7 222 aa17.41■□□□□ 0.38
SLC52A1-204ENST00000573674 NEMFO60524 1076 aa17.41■□□□□ 0.38
SLC52A1-204ENST00000573674 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
SLC52A1-204ENST00000573674 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 LRRC8AQ8IWT6 810 aa17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 IL1RAPL2Q9NP60 686 aa17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 ERBB3P21860 1342 aa17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 MAP4K4O95819 1239 aaPredicted RBP17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 ZC3H6P61129 1189 aaKnown RBP17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 NUTM1Q86Y26 1132 aa17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 ANKRD24Q8TF21 1146 aa17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 DNAJC2Q99543 621 aaKnown RBP17.4■□□□□ 0.38
SLC52A1-204ENST00000573674 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.38
SLC52A1-204ENST00000573674 USP27XA6NNY8 438 aa17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 DTNBO60941 627 aa17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 ATF3P18847 181 aa17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 ZNF165P49910 485 aa17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 PTPN14Q15678 1187 aa17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 ELF2Q15723 593 aa17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 TM6SF1Q9BZW5 370 aa17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 LRRFIP2Q9Y608 721 aaKnown RBP17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 STK31Q9BXU1 1019 aa17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 V9GYY5 206 aaPredicted RBP17.39■□□□□ 0.37
SLC52A1-204ENST00000573674 SLIT3O75094 1523 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 TRPM3Q9HCF6 1732 aaPredicted RBP17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 CAVIN2O95810 425 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 SARM1Q6SZW1 724 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 ZSWIM6Q9HCJ5 1215 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 NPHP3Q7Z494 1330 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 STRCP1A6NGW2 1772 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 ERICH4A6NGS2 130 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 ME3Q16798 604 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 LARP1BQ659C4 914 aaKnown RBP17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 MPRIPQ6WCQ1 1025 aa17.38■□□□□ 0.37
SLC52A1-204ENST00000573674 PAXIP1Q6ZW49 1069 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms