RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 LMBRD1Q9NUN5 540 aa12.36□□□□□ -0.43
CHRNB1-205ENST00000573209 KIF24Q5T7B8 1368 aa12.36□□□□□ -0.43
CHRNB1-205ENST00000573209 SPATA31D1Q6ZQQ2 1576 aa12.36□□□□□ -0.43
CHRNB1-205ENST00000573209 PRKAR2BP31323 418 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 GNAI1P63096 354 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 SH3GL3Q99963 347 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 TSPY26PQ9H489 355 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 IFT57Q9NWB7 429 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 ABCC4O15439 1325 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 SCP2P22307 547 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 ABCD1P33897 745 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 CD151P48509 253 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 ZRSR1Q15695 479 aaKnown RBP12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 LNPKQ9C0E8 428 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 AATKQ6ZMQ8 1374 aa12.35□□□□□ -0.43
CHRNB1-205ENST00000573209 AGLP35573 1532 aa12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 ZBTB7BO15156 539 aaPredicted RBP12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 KINO60870 393 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 RWDD2BP57060 319 aa12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 GIMAP7Q8NHV1 300 aa12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 DNAAF4Q8WXU2 420 aa12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 PSD3Q9NYI0 1048 aa12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 NRXN3Q9Y4C0 1643 aa12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 SGSM2O43147 1006 aa12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 FBXO38Q6PIJ6 1188 aa12.34□□□□□ -0.43
CHRNB1-205ENST00000573209 NEBLO76041 1014 aa12.33□□□□□ -0.44
CHRNB1-205ENST00000573209 MCTP1Q6DN14 999 aa12.33□□□□□ -0.44
CHRNB1-205ENST00000573209 CCDC186Q7Z3E2 898 aa12.33□□□□□ -0.44
CHRNB1-205ENST00000573209 CABP1Q9NZU7 370 aa12.33□□□□□ -0.44
CHRNB1-205ENST00000573209 CPSF2Q9P2I0 782 aaKnown RBP12.33□□□□□ -0.44
CHRNB1-205ENST00000573209 SYCE3A1L190 88 aa12.33□□□□□ -0.44
CHRNB1-205ENST00000573209 VAMP4O75379 141 aa12.33□□□□□ -0.44
CHRNB1-205ENST00000573209 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
CHRNB1-205ENST00000573209 A2ML1A8K2U0 1454 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 EIF3CLB5ME19 914 aaKnown RBP12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 PPFIA2O75334 1257 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 MAGEA8P43361 318 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 EIF3CQ99613 913 aaKnown RBP12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 RIMS2Q9UQ26 1411 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 MBD3O95983 291 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 MYBPC2Q14324 1141 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 PDCD2Q16342 344 aaPredicted RBP12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 TEX11Q8IYF3 940 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 EXOC8Q8IYI6 725 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 RNF214Q8ND24 703 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 SMARCE1Q969G3 411 aa12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 ZSCAN16Q9H4T2 348 aaPredicted RBP12.32□□□□□ -0.44
CHRNB1-205ENST00000573209 CORO7P57737 925 aa12.31□□□□□ -0.44
CHRNB1-205ENST00000573209 ICA1Q05084 483 aa12.31□□□□□ -0.44
CHRNB1-205ENST00000573209 GTF3C6Q969F1 213 aa12.31□□□□□ -0.44
CHRNB1-205ENST00000573209 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
CHRNB1-205ENST00000573209 API5Q9BZZ5 524 aaKnown RBP12.31□□□□□ -0.44
CHRNB1-205ENST00000573209 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
CHRNB1-205ENST00000573209 TRIM74Q86UV6 250 aa12.3□□□□□ -0.44
CHRNB1-205ENST00000573209 TRIM73Q86UV7 250 aa12.3□□□□□ -0.44
CHRNB1-205ENST00000573209 A1CFQ9NQ94 594 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-205ENST00000573209 NUB1Q9Y5A7 615 aa12.3□□□□□ -0.44
CHRNB1-205ENST00000573209 NALCNQ8IZF0 1738 aa12.3□□□□□ -0.44
CHRNB1-205ENST00000573209 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-205ENST00000573209 FHOD1Q9Y613 1164 aa12.3□□□□□ -0.44
CHRNB1-205ENST00000573209 CPS1P31327 1500 aa12.3□□□□□ -0.44
CHRNB1-205ENST00000573209 ACTN2P35609 894 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 MNAT1P51948 309 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 LEKR1Q6ZMV7 388 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 SYAP1Q96A49 352 aaPredicted RBP12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 EXOC4Q96A65 974 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 KIF2CQ99661 725 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 TMX4Q9H1E5 349 aaPredicted RBP12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 GOLGA6CA6NDK9 693 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 GOLGA6BA6NDN3 693 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 K7ELQ4 463 aaPredicted RBP12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 CDC45O75419 566 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 GOLGA6DP0CG33 693 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 IL13P35225 146 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 TTLL5Q6EMB2 1281 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 TBC1D9Q6ZT07 1266 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 SPATS2LQ9NUQ6 558 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 GOLGA6AQ9NYA3 693 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 TMEM63CQ9P1W3 806 aa12.29□□□□□ -0.44
CHRNB1-205ENST00000573209 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 FMN2Q9NZ56 1722 aa12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 ADCY5O95622 1261 aa12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 ELF1P32519 619 aa12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 PLA2G4AP47712 749 aa12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 NAA30Q147X3 362 aaPredicted RBP12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 TWISTNBQ3B726 338 aaPredicted RBP12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 CCDC30Q5VVM6 783 aa12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 TRIM6Q9C030 488 aaPredicted RBP12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
CHRNB1-205ENST00000573209 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms