RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
ERCC4-204ENST00000573018 AFF1P51825 1210 aaKnown RBP7.6□□□□□ -1.19
ERCC4-204ENST00000573018 CLDN10P78369 228 aa7.6□□□□□ -1.19
ERCC4-204ENST00000573018 NRG1Q02297 640 aaPredicted RBP7.6□□□□□ -1.19
ERCC4-204ENST00000573018 PSAPL1Q6NUJ1 521 aa7.6□□□□□ -1.19
ERCC4-204ENST00000573018 TRIM50Q86XT4 487 aa7.6□□□□□ -1.19
ERCC4-204ENST00000573018 NAGPAQ9UK23 515 aa7.6□□□□□ -1.19
ERCC4-204ENST00000573018 HIRAP54198 1017 aaPredicted RBP7.59□□□□□ -1.19
ERCC4-204ENST00000573018 BTLAQ7Z6A9 289 aa7.59□□□□□ -1.19
ERCC4-204ENST00000573018 FMR1NBQ8N0W7 255 aaPredicted RBP7.59□□□□□ -1.19
ERCC4-204ENST00000573018 TSEN2Q8NCE0 465 aaKnown RBP7.59□□□□□ -1.19
ERCC4-204ENST00000573018 DNAJB12Q9NXW2 375 aaKnown RBP7.59□□□□□ -1.19
ERCC4-204ENST00000573018 PPP1R12BO60237 982 aaPredicted RBP7.58□□□□□ -1.2
ERCC4-204ENST00000573018 SLC24A1O60721 1099 aa7.58□□□□□ -1.2
ERCC4-204ENST00000573018 NGLY1Q96IV0 654 aa7.58□□□□□ -1.2
ERCC4-204ENST00000573018 USP17L3A6NCW0 530 aa7.57□□□□□ -1.2
ERCC4-204ENST00000573018 USP17L4A6NCW7 530 aa7.57□□□□□ -1.2
ERCC4-204ENST00000573018 RGS9O75916 674 aaPredicted RBP7.57□□□□□ -1.2
ERCC4-204ENST00000573018 ATP1A2P50993 1020 aa7.57□□□□□ -1.2
ERCC4-204ENST00000573018 USP17L2Q6R6M4 530 aa7.57□□□□□ -1.2
ERCC4-204ENST00000573018 POTEAQ6S8J7 498 aa7.57□□□□□ -1.2
ERCC4-204ENST00000573018 USP17L1Q7RTZ2 530 aa7.57□□□□□ -1.2
ERCC4-204ENST00000573018 ALDH16A1Q8IZ83 802 aa7.57□□□□□ -1.2
ERCC4-204ENST00000573018 PNMA5Q96PV4 448 aa7.57□□□□□ -1.2
ERCC4-204ENST00000573018 SSBP4Q9BWG4 385 aaPredicted RBP7.57□□□□□ -1.2
ERCC4-204ENST00000573018 C21orf2O43822 256 aa7.56□□□□□ -1.2
ERCC4-204ENST00000573018 NFKB1P19838 968 aa7.56□□□□□ -1.2
ERCC4-204ENST00000573018 POM121Q96HA1 1249 aa7.56□□□□□ -1.2
ERCC4-204ENST00000573018 GSX2Q9BZM3 304 aa7.56□□□□□ -1.2
ERCC4-204ENST00000573018 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.56□□□□□ -1.2
ERCC4-204ENST00000573018 OGFOD1Q8N543 542 aa7.55□□□□□ -1.2
ERCC4-204ENST00000573018 CHMP7Q8WUX9 453 aaPredicted RBP7.55□□□□□ -1.2
ERCC4-204ENST00000573018 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
ERCC4-204ENST00000573018 POM121CA8CG34 1229 aa7.54□□□□□ -1.2
ERCC4-204ENST00000573018 CPB1P15086 417 aa7.54□□□□□ -1.2
ERCC4-204ENST00000573018 IREB2P48200 963 aaKnown RBP7.54□□□□□ -1.2
ERCC4-204ENST00000573018 FAM35AQ86V20 835 aa7.54□□□□□ -1.2
ERCC4-204ENST00000573018 PLEKHM2Q8IWE5 1019 aa7.54□□□□□ -1.2
ERCC4-204ENST00000573018 WWC1Q8IX03 1113 aa7.54□□□□□ -1.2
ERCC4-204ENST00000573018 ADAMTS19Q8TE59 1207 aa7.54□□□□□ -1.2
ERCC4-204ENST00000573018 WFDC12Q8WWY7 111 aa7.54□□□□□ -1.2
ERCC4-204ENST00000573018 CCINQ13939 588 aa7.53□□□□□ -1.2
ERCC4-204ENST00000573018 MSL1Q68DK7 614 aa7.53□□□□□ -1.2
ERCC4-204ENST00000573018 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
ERCC4-204ENST00000573018 SCG3Q8WXD2 468 aaKnown RBP7.53□□□□□ -1.2
ERCC4-204ENST00000573018 MKRN1Q9UHC7 482 aaKnown RBP7.53□□□□□ -1.2
ERCC4-204ENST00000573018 ATAD2Q6PL18 1390 aa7.53□□□□□ -1.2
ERCC4-204ENST00000573018 PALM3A6NDB9 673 aaPredicted RBP7.52□□□□□ -1.21
ERCC4-204ENST00000573018 M0R2N6 131 aa7.52□□□□□ -1.21
ERCC4-204ENST00000573018 NOS3P29474 1203 aa7.52□□□□□ -1.21
ERCC4-204ENST00000573018 PLAURQ03405 335 aa7.52□□□□□ -1.21
ERCC4-204ENST00000573018 ILDR2Q71H61 639 aa7.52□□□□□ -1.21
ERCC4-204ENST00000573018 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
ERCC4-204ENST00000573018 UCN2Q96RP3 112 aa7.52□□□□□ -1.21
ERCC4-204ENST00000573018 LGR5O75473 907 aa7.51□□□□□ -1.21
ERCC4-204ENST00000573018 HIF1AQ16665 826 aa7.51□□□□□ -1.21
ERCC4-204ENST00000573018 KRT25Q7Z3Z0 450 aa7.51□□□□□ -1.21
ERCC4-204ENST00000573018 FBXO11Q86XK2 927 aa7.51□□□□□ -1.21
ERCC4-204ENST00000573018 MEGF10Q96KG7 1140 aa7.51□□□□□ -1.21
ERCC4-204ENST00000573018 LPIN3Q9BQK8 851 aa7.51□□□□□ -1.21
ERCC4-204ENST00000573018 C2orf49Q9BVC5 232 aaPredicted RBP7.51□□□□□ -1.21
ERCC4-204ENST00000573018 EFCC1Q9HA90 598 aa7.51□□□□□ -1.21
ERCC4-204ENST00000573018 RNF112Q9ULX5 631 aa7.51□□□□□ -1.21
ERCC4-204ENST00000573018 RBM19Q9Y4C8 960 aaKnown RBP7.51□□□□□ -1.21
ERCC4-204ENST00000573018 ATP9BO43861 1147 aa7.5□□□□□ -1.21
ERCC4-204ENST00000573018 MLLT1Q03111 559 aaPredicted RBP7.5□□□□□ -1.21
ERCC4-204ENST00000573018 SIX5Q8N196 739 aa7.5□□□□□ -1.21
ERCC4-204ENST00000573018 GAS2L2Q8NHY3 880 aa7.5□□□□□ -1.21
ERCC4-204ENST00000573018 KRTAP9-9Q9BYP9 154 aa7.5□□□□□ -1.21
ERCC4-204ENST00000573018 KRTAP9-4Q9BYQ2 154 aa7.5□□□□□ -1.21
ERCC4-204ENST00000573018 DKK1O94907 266 aa7.49□□□□□ -1.21
ERCC4-204ENST00000573018 GRNP28799 593 aaKnown RBP7.49□□□□□ -1.21
ERCC4-204ENST00000573018 GRIK5Q16478 980 aa7.49□□□□□ -1.21
ERCC4-204ENST00000573018 TPRNQ4KMQ1 711 aa7.49□□□□□ -1.21
ERCC4-204ENST00000573018 PERM1Q5SV97 790 aa7.49□□□□□ -1.21
ERCC4-204ENST00000573018 WFDC8Q8IUA0 241 aa7.49□□□□□ -1.21
ERCC4-204ENST00000573018 DTWD1Q8N5C7 304 aa7.49□□□□□ -1.21
ERCC4-204ENST00000573018 BCS1LQ9Y276 419 aa7.49□□□□□ -1.21
ERCC4-204ENST00000573018 ZBTB42B2RXF5 422 aa7.48□□□□□ -1.21
ERCC4-204ENST00000573018 TGFBR3LH3BV60 316 aa7.48□□□□□ -1.21
ERCC4-204ENST00000573018 HDGFL1Q5TGJ6 251 aa7.48□□□□□ -1.21
ERCC4-204ENST00000573018 IER5Q5VY09 327 aa7.48□□□□□ -1.21
ERCC4-204ENST00000573018 ELMSAN1Q6PJG2 1045 aa7.48□□□□□ -1.21
ERCC4-204ENST00000573018 STAG2Q8N3U4 1231 aa7.48□□□□□ -1.21
ERCC4-204ENST00000573018 GOLGA2P5Q9HBQ8 144 aa7.48□□□□□ -1.21
ERCC4-204ENST00000573018 ZFATQ9P243 1243 aa7.48□□□□□ -1.21
ERCC4-204ENST00000573018 BTBD11A6QL63 1104 aa7.47□□□□□ -1.21
ERCC4-204ENST00000573018 RASA1P20936 1047 aa7.47□□□□□ -1.21
ERCC4-204ENST00000573018 RTN1Q16799 776 aa7.47□□□□□ -1.21
ERCC4-204ENST00000573018 MCTP1Q6DN14 999 aa7.47□□□□□ -1.21
ERCC4-204ENST00000573018 PRR23CQ6ZRP0 262 aa7.47□□□□□ -1.21
ERCC4-204ENST00000573018 DHX32Q7L7V1 743 aaKnown RBP7.47□□□□□ -1.21
ERCC4-204ENST00000573018 DMGDHQ9UI17 866 aaKnown RBP7.47□□□□□ -1.21
ERCC4-204ENST00000573018 RAD21O60216 631 aa7.46□□□□□ -1.22
ERCC4-204ENST00000573018 DEAF1O75398 565 aaPredicted RBP7.46□□□□□ -1.22
ERCC4-204ENST00000573018 TARSP26639 723 aaKnown RBP7.46□□□□□ -1.22
ERCC4-204ENST00000573018 IGF2-ASQ6U949 168 aa7.46□□□□□ -1.22
ERCC4-204ENST00000573018 HFE2Q6ZVN8 426 aa7.46□□□□□ -1.22
ERCC4-204ENST00000573018 PCMTD2Q9NV79 361 aa7.46□□□□□ -1.22
ERCC4-204ENST00000573018 KLK14Q9P0G3 267 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms