RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 AMER1Q5JTC6 1135 aaPredicted RBP13.69□□□□□ -0.22
CHMP6-203ENST00000572525 OLFM4Q6UX06 510 aa13.69□□□□□ -0.22
CHMP6-203ENST00000572525 ADARB2Q9NS39 739 aaKnown RBP13.69□□□□□ -0.22
CHMP6-203ENST00000572525 ANKRD36CQ5JPF3 1778 aa13.68□□□□□ -0.22
CHMP6-203ENST00000572525 AOC2O75106 756 aa13.68□□□□□ -0.22
CHMP6-203ENST00000572525 HOXA10P31260 410 aaPredicted RBP13.68□□□□□ -0.22
CHMP6-203ENST00000572525 NOGQ13253 232 aa13.68□□□□□ -0.22
CHMP6-203ENST00000572525 ZC3H15Q8WU90 426 aaKnown RBP13.68□□□□□ -0.22
CHMP6-203ENST00000572525 POLR3GLQ9BT43 218 aa13.68□□□□□ -0.22
CHMP6-203ENST00000572525 NIP7Q9Y221 180 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHMP6-203ENST00000572525 GJA3Q9Y6H8 435 aa13.68□□□□□ -0.22
CHMP6-203ENST00000572525 TRAF5O00463 557 aa13.67□□□□□ -0.22
CHMP6-203ENST00000572525 PRPF38BQ5VTL8 546 aaKnown RBP13.67□□□□□ -0.22
CHMP6-203ENST00000572525 NYXQ9GZU5 481 aa13.67□□□□□ -0.22
CHMP6-203ENST00000572525 SAGE1Q9NXZ1 904 aa13.67□□□□□ -0.22
CHMP6-203ENST00000572525 GPRC5DQ9NZD1 345 aa13.67□□□□□ -0.22
CHMP6-203ENST00000572525 TSKSQ9UJT2 592 aa13.67□□□□□ -0.22
CHMP6-203ENST00000572525 SNRPA1P09661 255 aaKnown RBP13.66□□□□□ -0.22
CHMP6-203ENST00000572525 EIF4G2P78344 907 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHMP6-203ENST00000572525 FMR1Q06787 632 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHMP6-203ENST00000572525 LARGE2Q8N3Y3 721 aa13.66□□□□□ -0.22
CHMP6-203ENST00000572525 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
CHMP6-203ENST00000572525 USP16Q9Y5T5 823 aa13.66□□□□□ -0.22
CHMP6-203ENST00000572525 LAMB2P55268 1798 aa13.66□□□□□ -0.22
CHMP6-203ENST00000572525 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
CHMP6-203ENST00000572525 GRM1Q13255 1194 aa13.65□□□□□ -0.22
CHMP6-203ENST00000572525 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
CHMP6-203ENST00000572525 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
CHMP6-203ENST00000572525 ABCC12Q96J65 1359 aa13.64□□□□□ -0.23
CHMP6-203ENST00000572525 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
CHMP6-203ENST00000572525 CIAPIN1Q6FI81 312 aa13.64□□□□□ -0.23
CHMP6-203ENST00000572525 NIM1KQ8IY84 436 aa13.64□□□□□ -0.23
CHMP6-203ENST00000572525 CRAMP1Q96RY5 1269 aa13.64□□□□□ -0.23
CHMP6-203ENST00000572525 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
CHMP6-203ENST00000572525 ERVV-1B6SEH8 477 aa13.63□□□□□ -0.23
CHMP6-203ENST00000572525 LRRC37AA6NMS7 1700 aa13.62□□□□□ -0.23
CHMP6-203ENST00000572525 NPC1L1Q9UHC9 1359 aa13.62□□□□□ -0.23
CHMP6-203ENST00000572525 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
CHMP6-203ENST00000572525 GTF2E1P29083 439 aaPredicted RBP13.62□□□□□ -0.23
CHMP6-203ENST00000572525 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
CHMP6-203ENST00000572525 CDC37L1Q7L3B6 337 aa13.62□□□□□ -0.23
CHMP6-203ENST00000572525 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
CHMP6-203ENST00000572525 RPGRQ92834 1020 aaKnown RBP13.62□□□□□ -0.23
CHMP6-203ENST00000572525 RTFDC1Q9BY42 306 aaPredicted RBP13.62□□□□□ -0.23
CHMP6-203ENST00000572525 DLG5Q8TDM6 1919 aa13.62□□□□□ -0.23
CHMP6-203ENST00000572525 KCNQ3O43525 872 aa13.61□□□□□ -0.23
CHMP6-203ENST00000572525 HSPA5P11021 654 aaKnown RBP13.61□□□□□ -0.23
CHMP6-203ENST00000572525 ZEB1P37275 1124 aaPredicted RBP13.61□□□□□ -0.23
CHMP6-203ENST00000572525 SUPT20HQ8NEM7 779 aa13.61□□□□□ -0.23
CHMP6-203ENST00000572525 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
CHMP6-203ENST00000572525 PPIP5K2O43314 1243 aa13.6□□□□□ -0.23
CHMP6-203ENST00000572525 CXCL9Q07325 125 aa13.6□□□□□ -0.23
CHMP6-203ENST00000572525 RBM17Q96I25 401 aaKnown RBP13.6□□□□□ -0.23
CHMP6-203ENST00000572525 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
CHMP6-203ENST00000572525 PPEF1O14829 653 aaPredicted RBP13.59□□□□□ -0.23
CHMP6-203ENST00000572525 PIP4K2AP48426 406 aaPredicted RBP13.59□□□□□ -0.23
CHMP6-203ENST00000572525 HLFQ16534 295 aa13.59□□□□□ -0.23
CHMP6-203ENST00000572525 CCDC102AQ96A19 550 aa13.59□□□□□ -0.23
CHMP6-203ENST00000572525 PSME4Q14997 1843 aa13.58□□□□□ -0.24
CHMP6-203ENST00000572525 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
CHMP6-203ENST00000572525 HUNKP57058 714 aa13.58□□□□□ -0.24
CHMP6-203ENST00000572525 TNIP1Q15025 636 aa13.58□□□□□ -0.24
CHMP6-203ENST00000572525 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
CHMP6-203ENST00000572525 GCC1Q96CN9 775 aa13.58□□□□□ -0.24
CHMP6-203ENST00000572525 TMX4Q9H1E5 349 aaPredicted RBP13.58□□□□□ -0.24
CHMP6-203ENST00000572525 ATP6V0A2Q9Y487 856 aa13.58□□□□□ -0.24
CHMP6-203ENST00000572525 MAP3K15Q6ZN16 1313 aa13.58□□□□□ -0.24
CHMP6-203ENST00000572525 RBBP6Q7Z6E9 1792 aaKnown RBP13.58□□□□□ -0.24
CHMP6-203ENST00000572525 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
CHMP6-203ENST00000572525 FAM155AB1AL88 458 aaPredicted RBP13.57□□□□□ -0.24
CHMP6-203ENST00000572525 PER1O15534 1290 aaPredicted RBP13.57□□□□□ -0.24
CHMP6-203ENST00000572525 HTATSF1O43719 755 aaKnown RBP13.57□□□□□ -0.24
CHMP6-203ENST00000572525 GMPSP49915 693 aaPredicted RBP13.57□□□□□ -0.24
CHMP6-203ENST00000572525 AOC3Q16853 763 aa13.57□□□□□ -0.24
CHMP6-203ENST00000572525 RGMBQ6NW40 437 aa13.57□□□□□ -0.24
CHMP6-203ENST00000572525 HIRAP54198 1017 aaPredicted RBP13.56□□□□□ -0.24
CHMP6-203ENST00000572525 SOX10P56693 466 aa13.56□□□□□ -0.24
CHMP6-203ENST00000572525 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
CHMP6-203ENST00000572525 PKN2Q16513 984 aaKnown RBP13.56□□□□□ -0.24
CHMP6-203ENST00000572525 CTU1Q7Z7A3 348 aaKnown RBP13.56□□□□□ -0.24
CHMP6-203ENST00000572525 NUTM1Q86Y26 1132 aa13.56□□□□□ -0.24
CHMP6-203ENST00000572525 DPF2Q92785 391 aa13.56□□□□□ -0.24
CHMP6-203ENST00000572525 ZIC5Q96T25 663 aa13.56□□□□□ -0.24
CHMP6-203ENST00000572525 MKI67P46013 3256 aaKnown RBP13.56□□□□□ -0.24
CHMP6-203ENST00000572525 TAF1P21675 1872 aa13.55□□□□□ -0.24
CHMP6-203ENST00000572525 DUOX1Q9NRD9 1551 aa13.55□□□□□ -0.24
CHMP6-203ENST00000572525 U2SURPO15042 1029 aaKnown RBP13.55□□□□□ -0.24
CHMP6-203ENST00000572525 NTSR2O95665 410 aa13.55□□□□□ -0.24
CHMP6-203ENST00000572525 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
CHMP6-203ENST00000572525 UBN2Q6ZU65 1347 aa13.55□□□□□ -0.24
CHMP6-203ENST00000572525 HTTP42858 3142 aa13.54□□□□□ -0.24
CHMP6-203ENST00000572525 PARP10Q53GL7 1025 aa13.54□□□□□ -0.24
CHMP6-203ENST00000572525 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
CHMP6-203ENST00000572525 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
CHMP6-203ENST00000572525 TRPM4Q8TD43 1214 aa13.54□□□□□ -0.24
CHMP6-203ENST00000572525 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
CHMP6-203ENST00000572525 PHACTR3Q96KR7 559 aa13.54□□□□□ -0.24
CHMP6-203ENST00000572525 BCL2L13Q9BXK5 485 aa13.54□□□□□ -0.24
CHMP6-203ENST00000572525 ZNF408Q9H9D4 720 aa13.54□□□□□ -0.24
CHMP6-203ENST00000572525 GBA2Q9HCG7 927 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms