RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 C2CD5Q86YS7 1000 aa23.18■■□□□ 1.3
PFN1-202ENST00000572383 TIAM2Q8IVF5 1701 aa23.17■■□□□ 1.3
PFN1-202ENST00000572383 PI4KAP2A4QPH2 592 aa23.17■■□□□ 1.3
PFN1-202ENST00000572383 PDE6BP35913 854 aa23.17■■□□□ 1.3
PFN1-202ENST00000572383 ST5P78524 1137 aa23.17■■□□□ 1.3
PFN1-202ENST00000572383 KSR2Q6VAB6 950 aa23.17■■□□□ 1.3
PFN1-202ENST00000572383 PI4KAP1Q8N8J0 262 aa23.17■■□□□ 1.3
PFN1-202ENST00000572383 MAP3K2Q9Y2U5 619 aa23.17■■□□□ 1.3
PFN1-202ENST00000572383 ATP5J2-PTCD1G3V325 749 aa23.16■■□□□ 1.3
PFN1-202ENST00000572383 PARP10Q53GL7 1025 aa23.16■■□□□ 1.3
PFN1-202ENST00000572383 NLRP10Q86W26 655 aa23.16■■□□□ 1.3
PFN1-202ENST00000572383 NUTM1Q86Y26 1132 aa23.16■■□□□ 1.3
PFN1-202ENST00000572383 TTLL6Q8N841 843 aa23.16■■□□□ 1.3
PFN1-202ENST00000572383 ZNF428Q96B54 188 aa23.16■■□□□ 1.3
PFN1-202ENST00000572383 ISCA1Q9BUE6 129 aa23.16■■□□□ 1.3
PFN1-202ENST00000572383 NYXQ9GZU5 481 aa23.16■■□□□ 1.3
PFN1-202ENST00000572383 NTSR2O95665 410 aa23.15■■□□□ 1.3
PFN1-202ENST00000572383 GTF2E1P29083 439 aaPredicted RBP23.15■■□□□ 1.3
PFN1-202ENST00000572383 FKBP5Q13451 457 aaPredicted RBP23.15■■□□□ 1.3
PFN1-202ENST00000572383 PPP1R42Q7Z4L9 355 aa23.15■■□□□ 1.3
PFN1-202ENST00000572383 MRPL50Q8N5N7 158 aaKnown RBP23.15■■□□□ 1.3
PFN1-202ENST00000572383 SSH1Q8WYL5 1049 aa23.15■■□□□ 1.3
PFN1-202ENST00000572383 MYD88Q99836 296 aa23.15■■□□□ 1.3
PFN1-202ENST00000572383 IBTKQ9P2D0 1353 aaPredicted RBP23.14■■□□□ 1.3
PFN1-202ENST00000572383 CACNA1FO60840 1977 aa23.14■■□□□ 1.3
PFN1-202ENST00000572383 CT47B1P0C2W7 299 aaPredicted RBP23.14■■□□□ 1.29
PFN1-202ENST00000572383 ERFEQ4G0M1 354 aa23.14■■□□□ 1.29
PFN1-202ENST00000572383 METTL22Q9BUU2 404 aaPredicted RBP23.14■■□□□ 1.29
PFN1-202ENST00000572383 BCL2L13Q9BXK5 485 aa23.14■■□□□ 1.29
PFN1-202ENST00000572383 SLX4Q8IY92 1834 aa23.14■■□□□ 1.29
PFN1-202ENST00000572383 UTP14AQ9BVJ6 771 aaKnown RBP23.13■■□□□ 1.29
PFN1-202ENST00000572383 ABCC12Q96J65 1359 aa23.13■■□□□ 1.29
PFN1-202ENST00000572383 TNRC6CQ9HCJ0 1690 aaKnown RBP23.13■■□□□ 1.29
PFN1-202ENST00000572383 ALDH1L2Q3SY69 923 aa23.12■■□□□ 1.29
PFN1-202ENST00000572383 KIF3CO14782 793 aa23.1■■□□□ 1.29
PFN1-202ENST00000572383 TRIM28Q13263 835 aaKnown RBP23.1■■□□□ 1.29
PFN1-202ENST00000572383 C9orf131Q5VYM1 1079 aa23.1■■□□□ 1.29
PFN1-202ENST00000572383 SMC4Q9NTJ3 1288 aa23.1■■□□□ 1.29
PFN1-202ENST00000572383 TRMT112Q9UI30 125 aaKnown RBP23.1■■□□□ 1.29
PFN1-202ENST00000572383 F6X3S4 739 aa23.09■■□□□ 1.29
PFN1-202ENST00000572383 SYNE4Q8N205 404 aa23.09■■□□□ 1.29
PFN1-202ENST00000572383 DNAAF4Q8WXU2 420 aa23.09■■□□□ 1.29
PFN1-202ENST00000572383 ZNF622Q969S3 477 aaKnown RBP eCLIP23.09■■□□□ 1.29
PFN1-202ENST00000572383 IGKV5-2P06315 115 aa23.08■■□□□ 1.29
PFN1-202ENST00000572383 RARSP54136 660 aaKnown RBP23.08■■□□□ 1.29
PFN1-202ENST00000572383 NEXNQ0ZGT2 675 aa23.08■■□□□ 1.29
PFN1-202ENST00000572383 STYK1Q6J9G0 422 aa23.08■■□□□ 1.29
PFN1-202ENST00000572383 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.28
PFN1-202ENST00000572383 SRGNP10124 158 aa23.07■■□□□ 1.28
PFN1-202ENST00000572383 CWF19L2Q2TBE0 894 aaKnown RBP23.07■■□□□ 1.28
PFN1-202ENST00000572383 CCDC191Q8NCU4 936 aa23.07■■□□□ 1.28
PFN1-202ENST00000572383 SH3TC1Q8TE82 1336 aa23.07■■□□□ 1.28
PFN1-202ENST00000572383 CEP350Q5VT06 3117 aa23.06■■□□□ 1.28
PFN1-202ENST00000572383 KLRG2A4D1S0 409 aaPredicted RBP23.06■■□□□ 1.28
PFN1-202ENST00000572383 RTL5Q5HYW3 569 aaPredicted RBP23.06■■□□□ 1.28
PFN1-202ENST00000572383 CNKSR1Q969H4 720 aa23.06■■□□□ 1.28
PFN1-202ENST00000572383 FAM89AQ96GI7 184 aa23.06■■□□□ 1.28
PFN1-202ENST00000572383 YTHDC1Q96MU7 727 aaKnown RBP23.06■■□□□ 1.28
PFN1-202ENST00000572383 CWC25Q9NXE8 425 aaPredicted RBP23.06■■□□□ 1.28
PFN1-202ENST00000572383 RNF181Q9P0P0 153 aa23.06■■□□□ 1.28
PFN1-202ENST00000572383 RIC1Q4ADV7 1423 aa23.06■■□□□ 1.28
PFN1-202ENST00000572383 NEURL1BA8MQ27 555 aa23.05■■□□□ 1.28
PFN1-202ENST00000572383 SLC10A5Q5PT55 438 aa23.05■■□□□ 1.28
PFN1-202ENST00000572383 MASTLQ96GX5 879 aa23.05■■□□□ 1.28
PFN1-202ENST00000572383 HCLS1P14317 486 aaPredicted RBP23.04■■□□□ 1.28
PFN1-202ENST00000572383 PRELPP51888 382 aa23.04■■□□□ 1.28
PFN1-202ENST00000572383 RASSF7Q02833 373 aa23.04■■□□□ 1.28
PFN1-202ENST00000572383 C3orf67Q6ZVT6 689 aa23.04■■□□□ 1.28
PFN1-202ENST00000572383 PTPRCP08575 1304 aa23.04■■□□□ 1.28
PFN1-202ENST00000572383 ZC3H4Q9UPT8 1303 aaKnown RBP23.04■■□□□ 1.28
PFN1-202ENST00000572383 LMNB1P20700 586 aa23.03■■□□□ 1.28
PFN1-202ENST00000572383 ZBTB38Q8NAP3 1195 aaPredicted RBP23.03■■□□□ 1.28
PFN1-202ENST00000572383 LINS1Q8NG48 757 aa23.03■■□□□ 1.28
PFN1-202ENST00000572383 JARID2Q92833 1246 aaPredicted RBP23.03■■□□□ 1.28
PFN1-202ENST00000572383 NPR1P16066 1061 aa23.02■■□□□ 1.28
PFN1-202ENST00000572383 CRY2Q49AN0 593 aa23.02■■□□□ 1.28
PFN1-202ENST00000572383 BEND3Q5T5X7 828 aa23.02■■□□□ 1.28
PFN1-202ENST00000572383 SLC4A10Q6U841 1118 aa23.02■■□□□ 1.28
PFN1-202ENST00000572383 NLRP3Q96P20 1036 aa23.02■■□□□ 1.28
PFN1-202ENST00000572383 NMRK2Q9NPI5 230 aa23.02■■□□□ 1.28
PFN1-202ENST00000572383 NOB1Q9ULX3 412 aaKnown RBP23.02■■□□□ 1.28
PFN1-202ENST00000572383 NFKBIEO00221 500 aa23.01■■□□□ 1.27
PFN1-202ENST00000572383 C21orf2O43822 256 aa23.01■■□□□ 1.27
PFN1-202ENST00000572383 BCAR3O75815 825 aa23.01■■□□□ 1.27
PFN1-202ENST00000572383 PCCAP05165 728 aaPredicted RBP23.01■■□□□ 1.27
PFN1-202ENST00000572383 BRPF1P55201 1214 aaPredicted RBP23.01■■□□□ 1.27
PFN1-202ENST00000572383 PRPF40BQ6NWY9 871 aaKnown RBP23.01■■□□□ 1.27
PFN1-202ENST00000572383 DDX60Q8IY21 1712 aaKnown RBP23.01■■□□□ 1.27
PFN1-202ENST00000572383 IRS4O14654 1257 aaPredicted RBP23■■□□□ 1.27
PFN1-202ENST00000572383 GCKRQ14397 625 aa23■■□□□ 1.27
PFN1-202ENST00000572383 SOGA3Q5TF21 947 aa23■■□□□ 1.27
PFN1-202ENST00000572383 KDM2BQ8NHM5 1336 aa22.99■■□□□ 1.27
PFN1-202ENST00000572383 WDR90Q96KV7 1748 aa22.99■■□□□ 1.27
PFN1-202ENST00000572383 LAMB2P55268 1798 aa22.99■■□□□ 1.27
PFN1-202ENST00000572383 RPGRQ92834 1020 aaKnown RBP22.98■■□□□ 1.27
PFN1-202ENST00000572383 ZNF219Q9P2Y4 722 aaPredicted RBP22.98■■□□□ 1.27
PFN1-202ENST00000572383 LTBP3Q9NS15 1303 aa22.98■■□□□ 1.27
PFN1-202ENST00000572383 H7C1W4 665 aa22.96■■□□□ 1.27
PFN1-202ENST00000572383 HSPA6P17066 643 aa22.96■■□□□ 1.27
PFN1-202ENST00000572383 HOXA10P31260 410 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms