RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 TTC41PQ6P2S7 1318 aa23.86■■□□□ 1.41
RPAIN-210ENST00000571613 SDSP20132 328 aa23.86■■□□□ 1.41
RPAIN-210ENST00000571613 ITPK1Q13572 414 aa23.86■■□□□ 1.41
RPAIN-210ENST00000571613 TBC1D9Q6ZT07 1266 aa23.86■■□□□ 1.41
RPAIN-210ENST00000571613 PA2G4Q9UQ80 394 aaKnown RBP23.86■■□□□ 1.41
RPAIN-210ENST00000571613 USP42Q9H9J4 1324 aaKnown RBP23.85■■□□□ 1.41
RPAIN-210ENST00000571613 RREB1Q92766 1687 aa23.85■■□□□ 1.41
RPAIN-210ENST00000571613 FOXO4P98177 505 aa23.85■■□□□ 1.41
RPAIN-210ENST00000571613 SEPT12Q8IYM1 358 aa23.85■■□□□ 1.41
RPAIN-210ENST00000571613 PLA2G12BQ9BX93 195 aa23.85■■□□□ 1.41
RPAIN-210ENST00000571613 MFAP1P55081 439 aaKnown RBP23.84■■□□□ 1.41
RPAIN-210ENST00000571613 LMBR1LQ6UX01 489 aa23.84■■□□□ 1.41
RPAIN-210ENST00000571613 CDHR2Q9BYE9 1310 aa23.83■■□□□ 1.41
RPAIN-210ENST00000571613 ERC2O15083 957 aa23.83■■□□□ 1.41
RPAIN-210ENST00000571613 RFX5P48382 616 aaPredicted RBP23.83■■□□□ 1.41
RPAIN-210ENST00000571613 NHSQ6T4R5 1651 aa23.83■■□□□ 1.41
RPAIN-210ENST00000571613 RGL2O15211 777 aa23.83■■□□□ 1.4
RPAIN-210ENST00000571613 IFIT2P09913 472 aaKnown RBP23.83■■□□□ 1.4
RPAIN-210ENST00000571613 NLRP10Q86W26 655 aa23.83■■□□□ 1.4
RPAIN-210ENST00000571613 JARID2Q92833 1246 aaPredicted RBP23.83■■□□□ 1.4
RPAIN-210ENST00000571613 C22orf23Q9BZE7 217 aa23.83■■□□□ 1.4
RPAIN-210ENST00000571613 PTPN12Q05209 780 aaKnown RBP23.82■■□□□ 1.4
RPAIN-210ENST00000571613 HLFQ16534 295 aa23.82■■□□□ 1.4
RPAIN-210ENST00000571613 CNTNAP4Q9C0A0 1308 aa23.81■■□□□ 1.4
RPAIN-210ENST00000571613 RC3H1Q5TC82 1133 aaKnown RBP23.81■■□□□ 1.4
RPAIN-210ENST00000571613 NUTM1Q86Y26 1132 aa23.81■■□□□ 1.4
RPAIN-210ENST00000571613 GLRX3O76003 335 aaKnown RBP23.8■■□□□ 1.4
RPAIN-210ENST00000571613 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
RPAIN-210ENST00000571613 TBC1D2BQ9UPU7 963 aa23.8■■□□□ 1.4
RPAIN-210ENST00000571613 ZNF652Q9Y2D9 606 aa23.8■■□□□ 1.4
RPAIN-210ENST00000571613 SASH1O94885 1247 aa23.79■■□□□ 1.4
RPAIN-210ENST00000571613 ZNF34Q8IZ26 560 aa23.79■■□□□ 1.4
RPAIN-210ENST00000571613 HSP90B1P14625 803 aaKnown RBP23.79■■□□□ 1.4
RPAIN-210ENST00000571613 PARP10Q53GL7 1025 aa23.79■■□□□ 1.4
RPAIN-210ENST00000571613 AK7Q96M32 723 aa23.79■■□□□ 1.4
RPAIN-210ENST00000571613 DAXXQ9UER7 740 aaPredicted RBP23.79■■□□□ 1.4
RPAIN-210ENST00000571613 CHMP3Q9Y3E7 222 aa23.79■■□□□ 1.4
RPAIN-210ENST00000571613 SIL1Q9H173 461 aa23.78■■□□□ 1.4
RPAIN-210ENST00000571613 ECHDC1Q9NTX5 307 aa23.78■■□□□ 1.4
RPAIN-210ENST00000571613 ANKRD36CQ5JPF3 1778 aa23.78■■□□□ 1.4
RPAIN-210ENST00000571613 COL5A3P25940 1745 aaPredicted RBP23.78■■□□□ 1.4
RPAIN-210ENST00000571613 HMGB2P26583 209 aaKnown RBP23.77■■□□□ 1.4
RPAIN-210ENST00000571613 RBM25P49756 843 aaKnown RBP23.77■■□□□ 1.4
RPAIN-210ENST00000571613 RTL5Q5HYW3 569 aaPredicted RBP23.77■■□□□ 1.4
RPAIN-210ENST00000571613 ZNF772Q68DY9 489 aaPredicted RBP23.77■■□□□ 1.4
RPAIN-210ENST00000571613 CLEC4GQ6UXB4 293 aa23.77■■□□□ 1.4
RPAIN-210ENST00000571613 AACSQ86V21 672 aa23.77■■□□□ 1.4
RPAIN-210ENST00000571613 TRIM6-TRIM34B2RNG4 842 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 GPTP24298 496 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 CCDC57Q2TAC2 916 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 PI4K2BQ8TCG2 481 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 BCL11BQ9C0K0 894 aaPredicted RBP23.76■■□□□ 1.39
RPAIN-210ENST00000571613 CIAO1O76071 339 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 CAMTA2O94983 1202 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 CSF1RP07333 972 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 IL15P40933 162 aaPredicted RBP23.76■■□□□ 1.39
RPAIN-210ENST00000571613 CNTROBQ8N137 903 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 LINC00116Q8NCU8 138 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 FAM89AQ96GI7 184 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 TRMT112Q9UI30 125 aaKnown RBP23.76■■□□□ 1.39
RPAIN-210ENST00000571613 BTAF1O14981 1849 aa23.76■■□□□ 1.39
RPAIN-210ENST00000571613 NUP98P52948 1817 aa23.75■■□□□ 1.39
RPAIN-210ENST00000571613 REC8O95072 547 aa23.75■■□□□ 1.39
RPAIN-210ENST00000571613 BECN1Q14457 450 aa23.75■■□□□ 1.39
RPAIN-210ENST00000571613 FAM196AQ6ZSG2 479 aa23.75■■□□□ 1.39
RPAIN-210ENST00000571613 KLHDC4Q8TBB5 520 aa23.75■■□□□ 1.39
RPAIN-210ENST00000571613 MSH5O43196 834 aa23.74■■□□□ 1.39
RPAIN-210ENST00000571613 ERICH6Q7L0X2 663 aa23.74■■□□□ 1.39
RPAIN-210ENST00000571613 GPR108Q9NPR9 543 aa23.74■■□□□ 1.39
RPAIN-210ENST00000571613 TSHZ3Q63HK5 1081 aa23.73■■□□□ 1.39
RPAIN-210ENST00000571613 RILPL2Q969X0 211 aa23.73■■□□□ 1.39
RPAIN-210ENST00000571613 EAF2Q96CJ1 260 aaPredicted RBP23.73■■□□□ 1.39
RPAIN-210ENST00000571613 CCNL1Q9UK58 526 aaPredicted RBP23.73■■□□□ 1.39
RPAIN-210ENST00000571613 PDE8AO60658 829 aa23.73■■□□□ 1.39
RPAIN-210ENST00000571613 MYH14Q7Z406 1995 aaKnown RBP23.73■■□□□ 1.39
RPAIN-210ENST00000571613 EYA2O00167 538 aa23.72■■□□□ 1.39
RPAIN-210ENST00000571613 IRS4O14654 1257 aaPredicted RBP23.72■■□□□ 1.39
RPAIN-210ENST00000571613 RPS6KA4O75676 772 aa23.72■■□□□ 1.39
RPAIN-210ENST00000571613 IFIT5Q13325 482 aaKnown RBP23.72■■□□□ 1.39
RPAIN-210ENST00000571613 KRT27Q7Z3Y8 459 aa23.71■■□□□ 1.39
RPAIN-210ENST00000571613 UTP14AQ9BVJ6 771 aaKnown RBP23.71■■□□□ 1.39
RPAIN-210ENST00000571613 SH3TC1Q8TE82 1336 aa23.71■■□□□ 1.39
RPAIN-210ENST00000571613 CTSWP56202 376 aa23.7■■□□□ 1.39
RPAIN-210ENST00000571613 RBM6P78332 1123 aaKnown RBP23.7■■□□□ 1.39
RPAIN-210ENST00000571613 TNNI3KQ59H18 835 aa23.7■■□□□ 1.39
RPAIN-210ENST00000571613 FPGT-TNNI3KV9GXZ4 949 aa23.7■■□□□ 1.39
RPAIN-210ENST00000571613 SBF2Q86WG5 1849 aa23.7■■□□□ 1.38
RPAIN-210ENST00000571613 TUBGCP6Q96RT7 1819 aa23.7■■□□□ 1.38
RPAIN-210ENST00000571613 TFCP2Q12800 502 aa23.7■■□□□ 1.38
RPAIN-210ENST00000571613 TAF7LQ5H9L4 462 aa23.7■■□□□ 1.38
RPAIN-210ENST00000571613 FAM182BQ5T319 152 aa23.7■■□□□ 1.38
RPAIN-210ENST00000571613 PTF1AQ7RTS3 328 aa23.7■■□□□ 1.38
RPAIN-210ENST00000571613 UBN2Q6ZU65 1347 aa23.7■■□□□ 1.38
RPAIN-210ENST00000571613 EPB41L2O43491 1005 aaKnown RBP23.69■■□□□ 1.38
RPAIN-210ENST00000571613 CHMLP26374 656 aa23.68■■□□□ 1.38
RPAIN-210ENST00000571613 ATG9AQ7Z3C6 839 aa23.68■■□□□ 1.38
RPAIN-210ENST00000571613 TTLL11Q8NHH1 800 aa23.68■■□□□ 1.38
RPAIN-210ENST00000571613 CCDC8Q9H0W5 538 aaPredicted RBP23.68■■□□□ 1.38
RPAIN-210ENST00000571613 NIP7Q9Y221 180 aaKnown RBP eCLIP23.68■■□□□ 1.38
RPAIN-210ENST00000571613 ANKRD18BA2A2Z9 1011 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms