RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MYD88Q99836 296 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 STK31Q9BXU1 1019 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 MAP3K2Q9Y2U5 619 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 ZBED9Q6R2W3 1325 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 TAF1P21675 1872 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 SLX4Q8IY92 1834 aa8.97□□□□□ -0.97
SMG6-209ENST00000571442 ARFGEF1Q9Y6D6 1849 aa8.97□□□□□ -0.97
SMG6-209ENST00000571442 TGFB2P61812 414 aa8.97□□□□□ -0.97
SMG6-209ENST00000571442 KSR2Q6VAB6 950 aa8.97□□□□□ -0.97
SMG6-209ENST00000571442 C2CD5Q86YS7 1000 aa8.97□□□□□ -0.97
SMG6-209ENST00000571442 METTL22Q9BUU2 404 aaPredicted RBP8.97□□□□□ -0.97
SMG6-209ENST00000571442 IBTKQ9P2D0 1353 aaPredicted RBP8.97□□□□□ -0.97
SMG6-209ENST00000571442 KLRG2A4D1S0 409 aaPredicted RBP8.96□□□□□ -0.98
SMG6-209ENST00000571442 CWF19L2Q2TBE0 894 aaKnown RBP8.96□□□□□ -0.98
SMG6-209ENST00000571442 RTL5Q5HYW3 569 aaPredicted RBP8.96□□□□□ -0.98
SMG6-209ENST00000571442 TPTE2Q6XPS3 522 aa8.96□□□□□ -0.98
SMG6-209ENST00000571442 BRIP1Q9BX63 1249 aa8.96□□□□□ -0.98
SMG6-209ENST00000571442 SRGNP10124 158 aa8.95□□□□□ -0.98
SMG6-209ENST00000571442 HCLS1P14317 486 aaPredicted RBP8.95□□□□□ -0.98
SMG6-209ENST00000571442 ST5P78524 1137 aa8.95□□□□□ -0.98
SMG6-209ENST00000571442 TRIM28Q13263 835 aaKnown RBP8.95□□□□□ -0.98
SMG6-209ENST00000571442 FKBP5Q13451 457 aaPredicted RBP8.95□□□□□ -0.98
SMG6-209ENST00000571442 PARP10Q53GL7 1025 aa8.95□□□□□ -0.98
SMG6-209ENST00000571442 HSP90AB3PQ58FF7 597 aa8.95□□□□□ -0.98
SMG6-209ENST00000571442 FAM89AQ96GI7 184 aa8.95□□□□□ -0.98
SMG6-209ENST00000571442 UTP14AQ9BVJ6 771 aaKnown RBP8.95□□□□□ -0.98
SMG6-209ENST00000571442 TNNQ9UQP3 1299 aa8.95□□□□□ -0.98
SMG6-209ENST00000571442 BCS1LQ9Y276 419 aa8.95□□□□□ -0.98
SMG6-209ENST00000571442 RIC1Q4ADV7 1423 aa8.95□□□□□ -0.98
SMG6-209ENST00000571442 NEURL1BA8MQ27 555 aa8.94□□□□□ -0.98
SMG6-209ENST00000571442 RARSP54136 660 aaKnown RBP8.94□□□□□ -0.98
SMG6-209ENST00000571442 CRY2Q49AN0 593 aa8.94□□□□□ -0.98
SMG6-209ENST00000571442 SLC10A5Q5PT55 438 aa8.94□□□□□ -0.98
SMG6-209ENST00000571442 OLFM4Q6UX06 510 aa8.94□□□□□ -0.98
SMG6-209ENST00000571442 PPP1R42Q7Z4L9 355 aa8.94□□□□□ -0.98
SMG6-209ENST00000571442 DNAAF4Q8WXU2 420 aa8.94□□□□□ -0.98
SMG6-209ENST00000571442 NYXQ9GZU5 481 aa8.94□□□□□ -0.98
SMG6-209ENST00000571442 TRMT112Q9UI30 125 aaKnown RBP8.94□□□□□ -0.98
SMG6-209ENST00000571442 H0YIN7 160 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 NPHP1O15259 732 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 GRIN3BO60391 1043 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 BCAR3O75815 825 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 DDX58O95786 925 aaKnown RBP8.93□□□□□ -0.98
SMG6-209ENST00000571442 GTF2E1P29083 439 aaPredicted RBP8.93□□□□□ -0.98
SMG6-209ENST00000571442 PDE6BP35913 854 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 PRELPP51888 382 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 CASP7P55210 303 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 ALDH1L2Q3SY69 923 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 BEND3Q5T5X7 828 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 ZNF622Q969S3 477 aaKnown RBP eCLIP8.93□□□□□ -0.98
SMG6-209ENST00000571442 SMC4Q9NTJ3 1288 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 PIM2Q9P1W9 311 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 SH3TC1Q8TE82 1336 aa8.93□□□□□ -0.98
SMG6-209ENST00000571442 SBF1O95248 1867 aa8.92□□□□□ -0.98
SMG6-209ENST00000571442 FER1L6Q2WGJ9 1857 aa8.92□□□□□ -0.98
SMG6-209ENST00000571442 PCCAP05165 728 aaPredicted RBP8.92□□□□□ -0.98
SMG6-209ENST00000571442 C1QTNF8P60827 252 aa8.92□□□□□ -0.98
SMG6-209ENST00000571442 DALRD3Q5D0E6 543 aaKnown RBP8.92□□□□□ -0.98
SMG6-209ENST00000571442 STYK1Q6J9G0 422 aa8.92□□□□□ -0.98
SMG6-209ENST00000571442 ZBTB38Q8NAP3 1195 aaPredicted RBP8.92□□□□□ -0.98
SMG6-209ENST00000571442 CCDC191Q8NCU4 936 aa8.92□□□□□ -0.98
SMG6-209ENST00000571442 C7orf43Q8WVR3 580 aa8.92□□□□□ -0.98
SMG6-209ENST00000571442 MASTLQ96GX5 879 aa8.92□□□□□ -0.98
SMG6-209ENST00000571442 CHMP4AQ9BY43 222 aa8.92□□□□□ -0.98
SMG6-209ENST00000571442 CWC25Q9NXE8 425 aaPredicted RBP8.92□□□□□ -0.98
SMG6-209ENST00000571442 ZNF219Q9P2Y4 722 aaPredicted RBP8.92□□□□□ -0.98
SMG6-209ENST00000571442 NOB1Q9ULX3 412 aaKnown RBP8.92□□□□□ -0.98
SMG6-209ENST00000571442 CCDC88AQ3V6T2 1871 aa8.91□□□□□ -0.98
SMG6-209ENST00000571442 SNED1Q8TER0 1413 aa8.91□□□□□ -0.98
SMG6-209ENST00000571442 IRS4O14654 1257 aaPredicted RBP8.91□□□□□ -0.98
SMG6-209ENST00000571442 CT47B1P0C2W7 299 aaPredicted RBP8.91□□□□□ -0.98
SMG6-209ENST00000571442 NPR1P16066 1061 aa8.91□□□□□ -0.98
SMG6-209ENST00000571442 BRPF1P55201 1214 aaPredicted RBP8.91□□□□□ -0.98
SMG6-209ENST00000571442 RASSF7Q02833 373 aa8.91□□□□□ -0.98
SMG6-209ENST00000571442 GCKRQ14397 625 aa8.91□□□□□ -0.98
SMG6-209ENST00000571442 PRPF40BQ6NWY9 871 aaKnown RBP8.91□□□□□ -0.98
SMG6-209ENST00000571442 SLC4A10Q6U841 1118 aa8.91□□□□□ -0.98
SMG6-209ENST00000571442 TTLL6Q8N841 843 aa8.91□□□□□ -0.98
SMG6-209ENST00000571442 LINS1Q8NG48 757 aa8.91□□□□□ -0.98
SMG6-209ENST00000571442 YTHDC1Q96MU7 727 aaKnown RBP8.91□□□□□ -0.98
SMG6-209ENST00000571442 MYH3P11055 1940 aa8.91□□□□□ -0.98
SMG6-209ENST00000571442 ABCC4O15439 1325 aa8.9□□□□□ -0.98
SMG6-209ENST00000571442 RNF123Q5XPI4 1314 aa8.9□□□□□ -0.98
SMG6-209ENST00000571442 H7C1W4 665 aa8.9□□□□□ -0.98
SMG6-209ENST00000571442 NFKBIEO00221 500 aa8.9□□□□□ -0.98
SMG6-209ENST00000571442 C21orf2O43822 256 aa8.9□□□□□ -0.98
SMG6-209ENST00000571442 HOXA10P31260 410 aaPredicted RBP8.9□□□□□ -0.98
SMG6-209ENST00000571442 EPHA10Q5JZY3 1008 aa8.9□□□□□ -0.98
SMG6-209ENST00000571442 NLRP3Q96P20 1036 aa8.9□□□□□ -0.98
SMG6-209ENST00000571442 CCDC85AQ96PX6 553 aaPredicted RBP8.9□□□□□ -0.98
SMG6-209ENST00000571442 SEC31BQ9NQW1 1179 aa8.9□□□□□ -0.98
SMG6-209ENST00000571442 SPEF2Q9C093 1822 aa8.89□□□□□ -0.99
SMG6-209ENST00000571442 PTPRCP08575 1304 aa8.89□□□□□ -0.99
SMG6-209ENST00000571442 CDHR2Q9BYE9 1310 aa8.89□□□□□ -0.99
SMG6-209ENST00000571442 NEXNQ0ZGT2 675 aa8.89□□□□□ -0.99
SMG6-209ENST00000571442 SF3B3Q15393 1217 aaKnown RBP8.89□□□□□ -0.99
SMG6-209ENST00000571442 ARHGAP27Q6ZUM4 889 aa8.89□□□□□ -0.99
SMG6-209ENST00000571442 UBE3BQ7Z3V4 1068 aa8.89□□□□□ -0.99
SMG6-209ENST00000571442 CELF1Q92879 486 aaKnown RBP8.89□□□□□ -0.99
SMG6-209ENST00000571442 KAZALD1Q96I82 304 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms