RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
SPNS2-202ENST00000570641 H7C1W4 665 aa22.65■■□□□ 1.22
SPNS2-202ENST00000570641 GPTP24298 496 aa22.65■■□□□ 1.22
SPNS2-202ENST00000570641 HDAC1Q13547 482 aaPredicted RBP22.65■■□□□ 1.22
SPNS2-202ENST00000570641 ZNF827Q17R98 1081 aa22.65■■□□□ 1.22
SPNS2-202ENST00000570641 PARP10Q53GL7 1025 aa22.65■■□□□ 1.22
SPNS2-202ENST00000570641 USPL1Q5W0Q7 1092 aa22.65■■□□□ 1.22
SPNS2-202ENST00000570641 NLRP10Q86W26 655 aa22.65■■□□□ 1.22
SPNS2-202ENST00000570641 ANKRD44Q8N8A2 993 aa22.65■■□□□ 1.22
SPNS2-202ENST00000570641 TFCP2L1Q9NZI6 479 aa22.65■■□□□ 1.22
SPNS2-202ENST00000570641 LRRFIP2Q9Y608 721 aaKnown RBP22.65■■□□□ 1.22
SPNS2-202ENST00000570641 CEP85Q6P2H3 762 aa22.64■■□□□ 1.21
SPNS2-202ENST00000570641 DEFB132Q7Z7B7 95 aa22.64■■□□□ 1.21
SPNS2-202ENST00000570641 SRP68Q9UHB9 627 aaKnown RBP22.64■■□□□ 1.21
SPNS2-202ENST00000570641 PCCAP05165 728 aaPredicted RBP22.63■■□□□ 1.21
SPNS2-202ENST00000570641 CENPQQ7L2Z9 268 aaPredicted RBP22.63■■□□□ 1.21
SPNS2-202ENST00000570641 UBE3BQ7Z3V4 1068 aa22.63■■□□□ 1.21
SPNS2-202ENST00000570641 STK32BQ9NY57 414 aa22.63■■□□□ 1.21
SPNS2-202ENST00000570641 NIP7Q9Y221 180 aaKnown RBP eCLIP22.63■■□□□ 1.21
SPNS2-202ENST00000570641 HMMRO75330 724 aa22.62■■□□□ 1.21
SPNS2-202ENST00000570641 BCL2L12Q9HB09 334 aa22.62■■□□□ 1.21
SPNS2-202ENST00000570641 UBN2Q6ZU65 1347 aa22.61■■□□□ 1.21
SPNS2-202ENST00000570641 IGHDP01880 384 aa22.61■■□□□ 1.21
SPNS2-202ENST00000570641 CASP7P55210 303 aa22.61■■□□□ 1.21
SPNS2-202ENST00000570641 ATP8B2P98198 1209 aa22.61■■□□□ 1.21
SPNS2-202ENST00000570641 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
SPNS2-202ENST00000570641 ZBTB38Q8NAP3 1195 aaPredicted RBP22.61■■□□□ 1.21
SPNS2-202ENST00000570641 SUCLG2Q96I99 432 aa22.61■■□□□ 1.21
SPNS2-202ENST00000570641 KDM2BQ8NHM5 1336 aa22.6■■□□□ 1.21
SPNS2-202ENST00000570641 COL24A1Q17RW2 1714 aa22.6■■□□□ 1.21
SPNS2-202ENST00000570641 SLC15A2Q16348 729 aa22.59■■□□□ 1.21
SPNS2-202ENST00000570641 SIRT2Q8IXJ6 389 aa22.59■■□□□ 1.21
SPNS2-202ENST00000570641 UTP14AQ9BVJ6 771 aaKnown RBP22.59■■□□□ 1.21
SPNS2-202ENST00000570641 TRMT112Q9UI30 125 aaKnown RBP22.59■■□□□ 1.21
SPNS2-202ENST00000570641 MYH3P11055 1940 aa22.59■■□□□ 1.21
SPNS2-202ENST00000570641 CDHR2Q9BYE9 1310 aa22.58■■□□□ 1.21
SPNS2-202ENST00000570641 TBC1D9BQ66K14 1250 aa22.58■■□□□ 1.21
SPNS2-202ENST00000570641 JARID2Q92833 1246 aaPredicted RBP22.58■■□□□ 1.21
SPNS2-202ENST00000570641 LAMB2P55268 1798 aa22.58■■□□□ 1.2
SPNS2-202ENST00000570641 MTX1Q13505 466 aa22.57■■□□□ 1.2
SPNS2-202ENST00000570641 SUSD4Q5VX71 490 aa22.57■■□□□ 1.2
SPNS2-202ENST00000570641 KAZALD1Q96I82 304 aa22.57■■□□□ 1.2
SPNS2-202ENST00000570641 SETDB2Q96T68 719 aa22.57■■□□□ 1.2
SPNS2-202ENST00000570641 BICC1Q9H694 974 aaKnown RBP22.57■■□□□ 1.2
SPNS2-202ENST00000570641 MSH5O43196 834 aa22.56■■□□□ 1.2
SPNS2-202ENST00000570641 GYS1P13807 737 aa22.56■■□□□ 1.2
SPNS2-202ENST00000570641 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
SPNS2-202ENST00000570641 COL23A1Q86Y22 540 aaPredicted RBP22.56■■□□□ 1.2
SPNS2-202ENST00000570641 FAM89AQ96GI7 184 aa22.56■■□□□ 1.2
SPNS2-202ENST00000570641 ANO8Q9HCE9 1232 aaPredicted RBP22.56■■□□□ 1.2
SPNS2-202ENST00000570641 PNPLA7Q6ZV29 1317 aa22.56■■□□□ 1.2
SPNS2-202ENST00000570641 SH3TC1Q8TE82 1336 aa22.56■■□□□ 1.2
SPNS2-202ENST00000570641 HSP90B1P14625 803 aaKnown RBP22.55■■□□□ 1.2
SPNS2-202ENST00000570641 BICDL1Q6ZP65 573 aa22.55■■□□□ 1.2
SPNS2-202ENST00000570641 PLA2G12BQ9BX93 195 aa22.55■■□□□ 1.2
SPNS2-202ENST00000570641 NYXQ9GZU5 481 aa22.55■■□□□ 1.2
SPNS2-202ENST00000570641 NTSR2O95665 410 aa22.54■■□□□ 1.2
SPNS2-202ENST00000570641 SSH3Q8TE77 659 aa22.54■■□□□ 1.2
SPNS2-202ENST00000570641 GCC1Q96CN9 775 aa22.54■■□□□ 1.2
SPNS2-202ENST00000570641 CARMIL3Q8ND23 1372 aa22.53■■□□□ 1.2
SPNS2-202ENST00000570641 PNMA6EA0A0J9YXQ4 647 aa22.53■■□□□ 1.2
SPNS2-202ENST00000570641 FAM177BA6PVY3 158 aa22.53■■□□□ 1.2
SPNS2-202ENST00000570641 IRS4O14654 1257 aaPredicted RBP22.53■■□□□ 1.2
SPNS2-202ENST00000570641 SRGAP3O43295 1099 aa22.53■■□□□ 1.2
SPNS2-202ENST00000570641 POLA2Q14181 598 aa22.53■■□□□ 1.2
SPNS2-202ENST00000570641 RABL6Q3YEC7 729 aaPredicted RBP22.53■■□□□ 1.2
SPNS2-202ENST00000570641 DDX60Q8IY21 1712 aaKnown RBP22.53■■□□□ 1.2
SPNS2-202ENST00000570641 FOXO4P98177 505 aa22.52■■□□□ 1.2
SPNS2-202ENST00000570641 EPHA10Q5JZY3 1008 aa22.52■■□□□ 1.2
SPNS2-202ENST00000570641 SMC5Q8IY18 1101 aa22.52■■□□□ 1.2
SPNS2-202ENST00000570641 PDE8AO60658 829 aa22.51■■□□□ 1.19
SPNS2-202ENST00000570641 NFIXQ14938 502 aa22.51■■□□□ 1.19
SPNS2-202ENST00000570641 NLGN1Q8N2Q7 840 aa22.51■■□□□ 1.19
SPNS2-202ENST00000570641 DCTPP1Q9H773 170 aa22.51■■□□□ 1.19
SPNS2-202ENST00000570641 GTF2E1P29083 439 aaPredicted RBP22.5■■□□□ 1.19
SPNS2-202ENST00000570641 LMBR1LQ6UX01 489 aa22.5■■□□□ 1.19
SPNS2-202ENST00000570641 TPTE2Q6XPS3 522 aa22.5■■□□□ 1.19
SPNS2-202ENST00000570641 NBPF5PQ86XG9 351 aaPredicted RBP22.5■■□□□ 1.19
SPNS2-202ENST00000570641 SYNE4Q8N205 404 aa22.49■■□□□ 1.19
SPNS2-202ENST00000570641 TM4SF1P30408 202 aa22.48■■□□□ 1.19
SPNS2-202ENST00000570641 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
SPNS2-202ENST00000570641 CSF1RP07333 972 aa22.47■■□□□ 1.19
SPNS2-202ENST00000570641 CTSWP56202 376 aa22.47■■□□□ 1.19
SPNS2-202ENST00000570641 ERFEQ4G0M1 354 aa22.47■■□□□ 1.19
SPNS2-202ENST00000570641 HSP90AB4PQ58FF6 505 aa22.47■■□□□ 1.19
SPNS2-202ENST00000570641 NUTM1Q86Y26 1132 aa22.47■■□□□ 1.19
SPNS2-202ENST00000570641 CHMP3Q9Y3E7 222 aa22.47■■□□□ 1.19
SPNS2-202ENST00000570641 NPHP1O15259 732 aa22.46■■□□□ 1.19
SPNS2-202ENST00000570641 SLC10A5Q5PT55 438 aa22.46■■□□□ 1.19
SPNS2-202ENST00000570641 HCLS1P14317 486 aaPredicted RBP22.45■■□□□ 1.18
SPNS2-202ENST00000570641 ZBTB47Q9UFB7 747 aaPredicted RBP22.45■■□□□ 1.18
SPNS2-202ENST00000570641 LRP5O75197 1615 aa22.45■■□□□ 1.18
SPNS2-202ENST00000570641 RAB11FIP3O75154 756 aa22.44■■□□□ 1.18
SPNS2-202ENST00000570641 SURF6O75683 361 aaKnown RBP22.44■■□□□ 1.18
SPNS2-202ENST00000570641 SERPINB2P05120 415 aa22.44■■□□□ 1.18
SPNS2-202ENST00000570641 CNBD1Q8NA66 436 aa22.44■■□□□ 1.18
SPNS2-202ENST00000570641 TTLL11Q8NHH1 800 aa22.44■■□□□ 1.18
SPNS2-202ENST00000570641 PDZRN3Q9UPQ7 1066 aa22.44■■□□□ 1.18
SPNS2-202ENST00000570641 NOP58Q9Y2X3 529 aaKnown RBP22.44■■□□□ 1.18
SPNS2-202ENST00000570641 NRXN2Q9P2S2 1712 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms