RNA–Protein interactions for RNA: ENST00000569961.5

CCDC187-203, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC187, Length 3,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-203ENST00000569961 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
CCDC187-203ENST00000569961 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
CCDC187-203ENST00000569961 MCM4P33991 863 aa17.07■□□□□ 0.32
CCDC187-203ENST00000569961 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
CCDC187-203ENST00000569961 HOXB7P09629 217 aa17.07■□□□□ 0.32
CCDC187-203ENST00000569961 ADCK5Q3MIX3 580 aa17.07■□□□□ 0.32
CCDC187-203ENST00000569961 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
CCDC187-203ENST00000569961 GOLIM4O00461 696 aa17.06■□□□□ 0.32
CCDC187-203ENST00000569961 ALDH1L1O75891 902 aa17.06■□□□□ 0.32
CCDC187-203ENST00000569961 ST18O60284 1047 aa17.06■□□□□ 0.32
CCDC187-203ENST00000569961 NMIQ13287 307 aaPredicted RBP17.06■□□□□ 0.32
CCDC187-203ENST00000569961 NECAB1Q8N987 351 aa17.06■□□□□ 0.32
CCDC187-203ENST00000569961 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
CCDC187-203ENST00000569961 A0A0D9SFI3 127 aa17.05■□□□□ 0.32
CCDC187-203ENST00000569961 CASTP20810 708 aaKnown RBP17.05■□□□□ 0.32
CCDC187-203ENST00000569961 RAB11FIP4Q86YS3 637 aa17.05■□□□□ 0.32
CCDC187-203ENST00000569961 CHST3Q7LGC8 479 aa17.05■□□□□ 0.32
CCDC187-203ENST00000569961 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
CCDC187-203ENST00000569961 PTPN12Q05209 780 aaKnown RBP17.05■□□□□ 0.32
CCDC187-203ENST00000569961 DDB1Q16531 1140 aa17.05■□□□□ 0.32
CCDC187-203ENST00000569961 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
CCDC187-203ENST00000569961 ZNF589Q86UQ0 364 aaPredicted RBP17.04■□□□□ 0.32
CCDC187-203ENST00000569961 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
CCDC187-203ENST00000569961 TRAK2O60296 914 aa17.04■□□□□ 0.32
CCDC187-203ENST00000569961 ATP6V1AP38606 617 aa17.04■□□□□ 0.32
CCDC187-203ENST00000569961 CHMP4CQ96CF2 233 aa17.04■□□□□ 0.32
CCDC187-203ENST00000569961 TMX3Q96JJ7 454 aa17.04■□□□□ 0.32
CCDC187-203ENST00000569961 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
CCDC187-203ENST00000569961 TRMT112Q9UI30 125 aaKnown RBP17.03■□□□□ 0.32
CCDC187-203ENST00000569961 HEG1Q9ULI3 1381 aa17.03■□□□□ 0.32
CCDC187-203ENST00000569961 RABEP1Q15276 862 aa17.03■□□□□ 0.32
CCDC187-203ENST00000569961 RAB11FIP3O75154 756 aa17.03■□□□□ 0.32
CCDC187-203ENST00000569961 GLRX3O76003 335 aaKnown RBP17.03■□□□□ 0.32
CCDC187-203ENST00000569961 ADORA1P30542 326 aa17.03■□□□□ 0.32
CCDC187-203ENST00000569961 LRP10Q7Z4F1 713 aa17.03■□□□□ 0.32
CCDC187-203ENST00000569961 SALL3Q9BXA9 1300 aa17.02■□□□□ 0.32
CCDC187-203ENST00000569961 COL5A2P05997 1499 aaPredicted RBP17.02■□□□□ 0.32
CCDC187-203ENST00000569961 MCCP23508 829 aa17.02■□□□□ 0.31
CCDC187-203ENST00000569961 SLIT3O75094 1523 aa17.02■□□□□ 0.31
CCDC187-203ENST00000569961 WTIPA6NIX2 430 aaPredicted RBP17.01■□□□□ 0.31
CCDC187-203ENST00000569961 KIF6Q6ZMV9 814 aa17.01■□□□□ 0.31
CCDC187-203ENST00000569961 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
CCDC187-203ENST00000569961 PANK2Q9BZ23 570 aa17.01■□□□□ 0.31
CCDC187-203ENST00000569961 TAF5LO75529 589 aa17.01■□□□□ 0.31
CCDC187-203ENST00000569961 CCDC57Q2TAC2 916 aa17.01■□□□□ 0.31
CCDC187-203ENST00000569961 PHF14O94880 888 aa17.01■□□□□ 0.31
CCDC187-203ENST00000569961 HAND2P61296 217 aa17.01■□□□□ 0.31
CCDC187-203ENST00000569961 HSP90AB4PQ58FF6 505 aa17.01■□□□□ 0.31
CCDC187-203ENST00000569961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCDC187-203ENST00000569961 JAG2Q9Y219 1238 aa17.01■□□□□ 0.31
CCDC187-203ENST00000569961 PRPF40AO75400 957 aaKnown RBP17■□□□□ 0.31
CCDC187-203ENST00000569961 NPHP1O15259 732 aa17■□□□□ 0.31
CCDC187-203ENST00000569961 LARGE1O95461 756 aa17■□□□□ 0.31
CCDC187-203ENST00000569961 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
CCDC187-203ENST00000569961 STARD3NLO95772 234 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 FGD1P98174 961 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 TNNI3KQ59H18 835 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 FERMT3Q86UX7 667 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 CCDC83Q8IWF9 413 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 FPGT-TNNI3KV9GXZ4 949 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 SGSM2O43147 1006 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 WASHC4Q2M389 1173 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 GREM2Q9H772 168 aa16.99■□□□□ 0.31
CCDC187-203ENST00000569961 VPS53Q5VIR6 699 aa16.98■□□□□ 0.31
CCDC187-203ENST00000569961 DZIP3Q86Y13 1208 aaKnown RBP16.98■□□□□ 0.31
CCDC187-203ENST00000569961 CNNM1Q9NRU3 951 aa16.98■□□□□ 0.31
CCDC187-203ENST00000569961 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
CCDC187-203ENST00000569961 SLC51AQ86UW1 340 aa16.98■□□□□ 0.31
CCDC187-203ENST00000569961 MPNDQ8N594 471 aa16.98■□□□□ 0.31
CCDC187-203ENST00000569961 CHMP4AQ9BY43 222 aa16.98■□□□□ 0.31
CCDC187-203ENST00000569961 SNX14Q9Y5W7 946 aa16.98■□□□□ 0.31
CCDC187-203ENST00000569961 DDX49Q9Y6V7 483 aaKnown RBP16.98■□□□□ 0.31
CCDC187-203ENST00000569961 TRPM3Q9HCF6 1732 aaPredicted RBP16.97■□□□□ 0.31
CCDC187-203ENST00000569961 FAM173BQ6P4H8 233 aa16.97■□□□□ 0.31
CCDC187-203ENST00000569961 MARCH10Q8NA82 808 aaPredicted RBP16.97■□□□□ 0.31
CCDC187-203ENST00000569961 LDHAL6AQ6ZMR3 332 aa16.97■□□□□ 0.31
CCDC187-203ENST00000569961 STAP2Q9UGK3 403 aa16.97■□□□□ 0.31
CCDC187-203ENST00000569961 RBM8AQ9Y5S9 174 aaKnown RBP16.97■□□□□ 0.31
CCDC187-203ENST00000569961 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
CCDC187-203ENST00000569961 AK2P54819 239 aa16.97■□□□□ 0.31
CCDC187-203ENST00000569961 SEC31BQ9NQW1 1179 aa16.97■□□□□ 0.31
CCDC187-203ENST00000569961 A0A1B0GUL7 405 aa16.96■□□□□ 0.31
CCDC187-203ENST00000569961 FOXO4P98177 505 aa16.96■□□□□ 0.31
CCDC187-203ENST00000569961 SLC4A8Q2Y0W8 1093 aa16.96■□□□□ 0.31
CCDC187-203ENST00000569961 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.31
CCDC187-203ENST00000569961 SCARF1Q14162 830 aa16.96■□□□□ 0.31
CCDC187-203ENST00000569961 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
CCDC187-203ENST00000569961 METTL24Q5JXM2 366 aa16.95■□□□□ 0.3
CCDC187-203ENST00000569961 CAVIN1Q6NZI2 390 aaKnown RBP16.95■□□□□ 0.3
CCDC187-203ENST00000569961 PODXL2Q9NZ53 605 aa16.95■□□□□ 0.3
CCDC187-203ENST00000569961 FAM208AQ9UK61 1670 aaKnown RBP16.95■□□□□ 0.3
CCDC187-203ENST00000569961 VPS37CA5D8V6 355 aaPredicted RBP16.95■□□□□ 0.3
CCDC187-203ENST00000569961 MEX3CQ5U5Q3 659 aaKnown RBP16.95■□□□□ 0.3
CCDC187-203ENST00000569961 ERC1Q8IUD2 1116 aa16.95■□□□□ 0.3
CCDC187-203ENST00000569961 SNX21Q969T3 373 aa16.95■□□□□ 0.3
CCDC187-203ENST00000569961 CEP126Q9P2H0 1117 aa16.95■□□□□ 0.3
CCDC187-203ENST00000569961 DDX11Q96FC9 970 aa16.94■□□□□ 0.3
CCDC187-203ENST00000569961 LSG1Q9H089 658 aaKnown RBP16.94■□□□□ 0.3
CCDC187-203ENST00000569961 CPDO75976 1380 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms