RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 LRPPRCP42704 1394 aaKnown RBP9.02□□□□□ -0.97
UBFD1-209ENST00000569919 E9PCH4 1651 aa9.02□□□□□ -0.97
UBFD1-209ENST00000569919 FOXO3O43524 673 aa9.02□□□□□ -0.97
UBFD1-209ENST00000569919 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
UBFD1-209ENST00000569919 KRT27Q7Z3Y8 459 aa9.02□□□□□ -0.97
UBFD1-209ENST00000569919 TRIM50Q86XT4 487 aa9.02□□□□□ -0.97
UBFD1-209ENST00000569919 OGFOD1Q8N543 542 aa9.02□□□□□ -0.97
UBFD1-209ENST00000569919 STK32AQ8WU08 396 aa9.02□□□□□ -0.97
UBFD1-209ENST00000569919 MAP4K5Q9Y4K4 846 aa9.02□□□□□ -0.97
UBFD1-209ENST00000569919 PCDHB11Q9Y5F2 797 aa9.02□□□□□ -0.97
UBFD1-209ENST00000569919 SLC19A1P41440 591 aa9.01□□□□□ -0.97
UBFD1-209ENST00000569919 CLDN10P78369 228 aa9.01□□□□□ -0.97
UBFD1-209ENST00000569919 ARID5BQ14865 1188 aa9.01□□□□□ -0.97
UBFD1-209ENST00000569919 TMEM164Q5U3C3 297 aa9.01□□□□□ -0.97
UBFD1-209ENST00000569919 LRP5O75197 1615 aa9.01□□□□□ -0.97
UBFD1-209ENST00000569919 COL22A1Q8NFW1 1626 aaPredicted RBP9.01□□□□□ -0.97
UBFD1-209ENST00000569919 NRXN3Q9Y4C0 1643 aa9.01□□□□□ -0.97
UBFD1-209ENST00000569919 MYOM2P54296 1465 aa9.01□□□□□ -0.97
UBFD1-209ENST00000569919 ATP1A2P50993 1020 aa9□□□□□ -0.97
UBFD1-209ENST00000569919 USP4Q13107 963 aa9□□□□□ -0.97
UBFD1-209ENST00000569919 VPS72Q15906 364 aa9□□□□□ -0.97
UBFD1-209ENST00000569919 INTS6LQ5JSJ4 861 aaKnown RBP9□□□□□ -0.97
UBFD1-209ENST00000569919 CDK15Q96Q40 435 aa9□□□□□ -0.97
UBFD1-209ENST00000569919 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
UBFD1-209ENST00000569919 RALGAPBQ86X10 1494 aa9□□□□□ -0.97
UBFD1-209ENST00000569919 BRD1O95696 1058 aa8.99□□□□□ -0.97
UBFD1-209ENST00000569919 XPCQ01831 940 aaPredicted RBP8.99□□□□□ -0.97
UBFD1-209ENST00000569919 ANKMY2Q8IV38 441 aa8.99□□□□□ -0.97
UBFD1-209ENST00000569919 FAM200AQ8TCP9 573 aa8.99□□□□□ -0.97
UBFD1-209ENST00000569919 ZNF594Q96JF6 807 aaPredicted RBP8.99□□□□□ -0.97
UBFD1-209ENST00000569919 CCDC9Q9Y3X0 531 aaKnown RBP8.99□□□□□ -0.97
UBFD1-209ENST00000569919 NALCNQ8IZF0 1738 aa8.99□□□□□ -0.97
UBFD1-209ENST00000569919 ROCK1Q13464 1354 aa8.99□□□□□ -0.97
UBFD1-209ENST00000569919 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
UBFD1-209ENST00000569919 IQGAP3Q86VI3 1631 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 HFM1A2PYH4 1435 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 ERVH48-1M5A8F1 160 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 ZBTB7BO15156 539 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-209ENST00000569919 SIAH2O43255 324 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 YY1P25490 414 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 GRM5P41594 1212 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 GTF2IP78347 998 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 DPYDQ12882 1025 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 LARGE2Q8N3Y3 721 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 SIRT1Q96EB6 747 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 TLL2Q9Y6L7 1015 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 SLIT2O94813 1529 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 SPATA31A3Q5VYP0 1347 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 RPGRIP1LQ68CZ1 1315 aa8.98□□□□□ -0.97
UBFD1-209ENST00000569919 WNT7AO00755 349 aa8.97□□□□□ -0.97
UBFD1-209ENST00000569919 PSME1Q06323 249 aa8.97□□□□□ -0.97
UBFD1-209ENST00000569919 KRT28Q7Z3Y7 464 aa8.97□□□□□ -0.97
UBFD1-209ENST00000569919 MPNDQ8N594 471 aa8.97□□□□□ -0.97
UBFD1-209ENST00000569919 KIAA1024Q9UPX6 916 aa8.97□□□□□ -0.97
UBFD1-209ENST00000569919 PCDHGA11Q9Y5H2 935 aa8.97□□□□□ -0.97
UBFD1-209ENST00000569919 MARF1Q9Y4F3 1742 aaKnown RBP8.97□□□□□ -0.97
UBFD1-209ENST00000569919 GLI3P10071 1580 aa8.96□□□□□ -0.97
UBFD1-209ENST00000569919 FSHRP23945 695 aa8.96□□□□□ -0.98
UBFD1-209ENST00000569919 SPRYD7Q5W111 196 aa8.96□□□□□ -0.98
UBFD1-209ENST00000569919 MRGPRX2Q96LB1 330 aa8.96□□□□□ -0.98
UBFD1-209ENST00000569919 SPHKAPQ2M3C7 1700 aa8.96□□□□□ -0.98
UBFD1-209ENST00000569919 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.96□□□□□ -0.98
UBFD1-209ENST00000569919 PXDNQ92626 1479 aa8.96□□□□□ -0.98
UBFD1-209ENST00000569919 EP400Q96L91 3159 aa8.95□□□□□ -0.98
UBFD1-209ENST00000569919 A0A0G2JS52 829 aa8.95□□□□□ -0.98
UBFD1-209ENST00000569919 DKK1O94907 266 aa8.95□□□□□ -0.98
UBFD1-209ENST00000569919 SCTRP47872 440 aa8.95□□□□□ -0.98
UBFD1-209ENST00000569919 MYT1Q01538 1121 aa8.95□□□□□ -0.98
UBFD1-209ENST00000569919 R3HDM1Q15032 1099 aaKnown RBP8.95□□□□□ -0.98
UBFD1-209ENST00000569919 CCDC102BQ68D86 513 aa8.95□□□□□ -0.98
UBFD1-209ENST00000569919 SIX5Q8N196 739 aa8.95□□□□□ -0.98
UBFD1-209ENST00000569919 PLA2G2EQ9NZK7 142 aa8.95□□□□□ -0.98
UBFD1-209ENST00000569919 BRWD3Q6RI45 1802 aa8.94□□□□□ -0.98
UBFD1-209ENST00000569919 MYCP01106 439 aaPredicted RBP8.94□□□□□ -0.98
UBFD1-209ENST00000569919 KCNA1Q09470 495 aa8.94□□□□□ -0.98
UBFD1-209ENST00000569919 TPCN2Q8NHX9 752 aa8.94□□□□□ -0.98
UBFD1-209ENST00000569919 TMPRSS4Q9NRS4 437 aa8.94□□□□□ -0.98
UBFD1-209ENST00000569919 PRAG1Q86YV5 1406 aa8.94□□□□□ -0.98
UBFD1-209ENST00000569919 FAM83GA6ND36 823 aa8.93□□□□□ -0.98
UBFD1-209ENST00000569919 ADH1CP00326 375 aa8.93□□□□□ -0.98
UBFD1-209ENST00000569919 DHX9Q08211 1270 aaKnown RBP8.93□□□□□ -0.98
UBFD1-209ENST00000569919 RBM19Q9Y4C8 960 aaKnown RBP8.93□□□□□ -0.98
UBFD1-209ENST00000569919 NEXMIFQ5QGS0 1516 aa8.93□□□□□ -0.98
UBFD1-209ENST00000569919 PATL2C9JE40 543 aaKnown RBP8.92□□□□□ -0.98
UBFD1-209ENST00000569919 SEC13P55735 322 aa8.92□□□□□ -0.98
UBFD1-209ENST00000569919 ERVK-9P63128 1117 aa8.92□□□□□ -0.98
UBFD1-209ENST00000569919 NR5A1Q13285 461 aa8.92□□□□□ -0.98
UBFD1-209ENST00000569919 ZNF697Q5TEC3 545 aa8.92□□□□□ -0.98
UBFD1-209ENST00000569919 CC2D2BQ6DHV5 1058 aa8.92□□□□□ -0.98
UBFD1-209ENST00000569919 WAPLQ7Z5K2 1190 aa8.92□□□□□ -0.98
UBFD1-209ENST00000569919 ZNF598Q86UK7 904 aaKnown RBP8.92□□□□□ -0.98
UBFD1-209ENST00000569919 CYLDQ9NQC7 956 aa8.92□□□□□ -0.98
UBFD1-209ENST00000569919 CCDC144AA2RUR9 1427 aa8.91□□□□□ -0.98
UBFD1-209ENST00000569919 SFI1A8K8P3 1242 aa8.91□□□□□ -0.98
UBFD1-209ENST00000569919 ITGAEP38570 1179 aa8.91□□□□□ -0.98
UBFD1-209ENST00000569919 SWI5Q1ZZU3 235 aa8.91□□□□□ -0.98
UBFD1-209ENST00000569919 PPP1R26Q5T8A7 1209 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-209ENST00000569919 B4GALNT3Q6L9W6 998 aa8.91□□□□□ -0.98
UBFD1-209ENST00000569919 CCDC116Q8IYX3 515 aa8.91□□□□□ -0.98
UBFD1-209ENST00000569919 ZNF784Q8NCA9 323 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms