RNA–Protein interactions for RNA: ENST00000569768.1

THUMPD1-204, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-204ENST00000569768 CEP85Q6P2H3 762 aa18.49■□□□□ 0.55
THUMPD1-204ENST00000569768 CENPQQ7L2Z9 268 aaPredicted RBP18.49■□□□□ 0.55
THUMPD1-204ENST00000569768 AMIGO3Q86WK7 504 aa18.49■□□□□ 0.55
THUMPD1-204ENST00000569768 RWDD1Q9H446 243 aaPredicted RBP18.49■□□□□ 0.55
THUMPD1-204ENST00000569768 BCL2L12Q9HB09 334 aa18.49■□□□□ 0.55
THUMPD1-204ENST00000569768 ZNF827Q17R98 1081 aa18.48■□□□□ 0.55
THUMPD1-204ENST00000569768 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
THUMPD1-204ENST00000569768 ILDR2Q71H61 639 aa18.48■□□□□ 0.55
THUMPD1-204ENST00000569768 ZBTB38Q8NAP3 1195 aaPredicted RBP18.48■□□□□ 0.55
THUMPD1-204ENST00000569768 COL24A1Q17RW2 1714 aa18.47■□□□□ 0.55
THUMPD1-204ENST00000569768 HMMRO75330 724 aa18.47■□□□□ 0.55
THUMPD1-204ENST00000569768 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
THUMPD1-204ENST00000569768 PLA2G12BQ9BX93 195 aa18.47■□□□□ 0.55
THUMPD1-204ENST00000569768 LRRFIP2Q9Y608 721 aaKnown RBP18.47■□□□□ 0.55
THUMPD1-204ENST00000569768 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
THUMPD1-204ENST00000569768 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
THUMPD1-204ENST00000569768 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
THUMPD1-204ENST00000569768 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
THUMPD1-204ENST00000569768 C1orf115Q9H7X2 142 aa18.46■□□□□ 0.55
THUMPD1-204ENST00000569768 TFCP2L1Q9NZI6 479 aa18.46■□□□□ 0.55
THUMPD1-204ENST00000569768 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
THUMPD1-204ENST00000569768 SLC15A2Q16348 729 aa18.45■□□□□ 0.54
THUMPD1-204ENST00000569768 RABL6Q3YEC7 729 aaPredicted RBP18.45■□□□□ 0.54
THUMPD1-204ENST00000569768 SIRT2Q8IXJ6 389 aa18.45■□□□□ 0.54
THUMPD1-204ENST00000569768 STK32BQ9NY57 414 aa18.45■□□□□ 0.54
THUMPD1-204ENST00000569768 NIP7Q9Y221 180 aaKnown RBP eCLIP18.45■□□□□ 0.54
THUMPD1-204ENST00000569768 PHF14O94880 888 aa18.44■□□□□ 0.54
THUMPD1-204ENST00000569768 UBE3BQ7Z3V4 1068 aa18.44■□□□□ 0.54
THUMPD1-204ENST00000569768 SSH3Q8TE77 659 aa18.44■□□□□ 0.54
THUMPD1-204ENST00000569768 KAZALD1Q96I82 304 aa18.44■□□□□ 0.54
THUMPD1-204ENST00000569768 SUCLG2Q96I99 432 aa18.44■□□□□ 0.54
THUMPD1-204ENST00000569768 SRP68Q9UHB9 627 aaKnown RBP18.44■□□□□ 0.54
THUMPD1-204ENST00000569768 IGHDP01880 384 aa18.43■□□□□ 0.54
THUMPD1-204ENST00000569768 GPTP24298 496 aa18.43■□□□□ 0.54
THUMPD1-204ENST00000569768 DEFB132Q7Z7B7 95 aa18.43■□□□□ 0.54
THUMPD1-204ENST00000569768 SMC5Q8IY18 1101 aa18.43■□□□□ 0.54
THUMPD1-204ENST00000569768 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
THUMPD1-204ENST00000569768 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
THUMPD1-204ENST00000569768 PNPLA7Q6ZV29 1317 aa18.43■□□□□ 0.54
THUMPD1-204ENST00000569768 SH3TC1Q8TE82 1336 aa18.43■□□□□ 0.54
THUMPD1-204ENST00000569768 NTSR2O95665 410 aa18.42■□□□□ 0.54
THUMPD1-204ENST00000569768 GYS1P13807 737 aa18.42■□□□□ 0.54
THUMPD1-204ENST00000569768 POLA2Q14181 598 aa18.42■□□□□ 0.54
THUMPD1-204ENST00000569768 SUSD4Q5VX71 490 aa18.42■□□□□ 0.54
THUMPD1-204ENST00000569768 UPF1Q92900 1129 aaKnown RBP eCLIP18.42■□□□□ 0.54
THUMPD1-204ENST00000569768 NYXQ9GZU5 481 aa18.42■□□□□ 0.54
THUMPD1-204ENST00000569768 TRMT112Q9UI30 125 aaKnown RBP18.42■□□□□ 0.54
THUMPD1-204ENST00000569768 LAMB2P55268 1798 aa18.42■□□□□ 0.54
THUMPD1-204ENST00000569768 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
THUMPD1-204ENST00000569768 TBC1D9BQ66K14 1250 aa18.41■□□□□ 0.54
THUMPD1-204ENST00000569768 SETDB2Q96T68 719 aa18.41■□□□□ 0.54
THUMPD1-204ENST00000569768 BICC1Q9H694 974 aaKnown RBP18.41■□□□□ 0.54
THUMPD1-204ENST00000569768 ANO8Q9HCE9 1232 aaPredicted RBP18.41■□□□□ 0.54
THUMPD1-204ENST00000569768 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
THUMPD1-204ENST00000569768 SMIM5Q71RC9 77 aa18.4■□□□□ 0.54
THUMPD1-204ENST00000569768 COL23A1Q86Y22 540 aaPredicted RBP18.4■□□□□ 0.54
THUMPD1-204ENST00000569768 NLGN1Q8N2Q7 840 aa18.4■□□□□ 0.54
THUMPD1-204ENST00000569768 DCTPP1Q9H773 170 aa18.4■□□□□ 0.54
THUMPD1-204ENST00000569768 FOXO4P98177 505 aa18.39■□□□□ 0.53
THUMPD1-204ENST00000569768 PNMA6EA0A0J9YXQ4 647 aa18.38■□□□□ 0.53
THUMPD1-204ENST00000569768 IRS4O14654 1257 aaPredicted RBP18.38■□□□□ 0.53
THUMPD1-204ENST00000569768 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
THUMPD1-204ENST00000569768 PDE8AO60658 829 aa18.38■□□□□ 0.53
THUMPD1-204ENST00000569768 CSF1RP07333 972 aa18.38■□□□□ 0.53
THUMPD1-204ENST00000569768 TM4SF1P30408 202 aa18.38■□□□□ 0.53
THUMPD1-204ENST00000569768 SLC10A5Q5PT55 438 aa18.38■□□□□ 0.53
THUMPD1-204ENST00000569768 FAM89AQ96GI7 184 aa18.38■□□□□ 0.53
THUMPD1-204ENST00000569768 NFIXQ14938 502 aa18.37■□□□□ 0.53
THUMPD1-204ENST00000569768 EPHA10Q5JZY3 1008 aa18.37■□□□□ 0.53
THUMPD1-204ENST00000569768 TPTE2Q6XPS3 522 aa18.37■□□□□ 0.53
THUMPD1-204ENST00000569768 NOP58Q9Y2X3 529 aaKnown RBP18.37■□□□□ 0.53
THUMPD1-204ENST00000569768 MYH3P11055 1940 aa18.36■□□□□ 0.53
THUMPD1-204ENST00000569768 HSP90AB4PQ58FF6 505 aa18.36■□□□□ 0.53
THUMPD1-204ENST00000569768 DDX60Q8IY21 1712 aaKnown RBP18.36■□□□□ 0.53
THUMPD1-204ENST00000569768 RTL9Q8NET4 1388 aa18.36■□□□□ 0.53
THUMPD1-204ENST00000569768 CTSWP56202 376 aa18.35■□□□□ 0.53
THUMPD1-204ENST00000569768 LMBR1LQ6UX01 489 aa18.35■□□□□ 0.53
THUMPD1-204ENST00000569768 NBPF5PQ86XG9 351 aaPredicted RBP18.35■□□□□ 0.53
THUMPD1-204ENST00000569768 SLC16A10Q8TF71 515 aa18.35■□□□□ 0.53
THUMPD1-204ENST00000569768 COPRSQ9NQ92 184 aa18.35■□□□□ 0.53
THUMPD1-204ENST00000569768 NRXN2Q9P2S2 1712 aa18.35■□□□□ 0.53
THUMPD1-204ENST00000569768 RFX5P48382 616 aaPredicted RBP18.34■□□□□ 0.53
THUMPD1-204ENST00000569768 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
THUMPD1-204ENST00000569768 FBXO3Q9UK99 471 aa18.34■□□□□ 0.53
THUMPD1-204ENST00000569768 POLRMTO00411 1230 aaKnown RBP18.33■□□□□ 0.52
THUMPD1-204ENST00000569768 RAB11FIP3O75154 756 aa18.33■□□□□ 0.52
THUMPD1-204ENST00000569768 BICDL1Q6ZP65 573 aa18.33■□□□□ 0.52
THUMPD1-204ENST00000569768 TTLL11Q8NHH1 800 aa18.33■□□□□ 0.52
THUMPD1-204ENST00000569768 NUCB1Q02818 461 aa18.32■□□□□ 0.52
THUMPD1-204ENST00000569768 SF3B3Q15393 1217 aaKnown RBP18.32■□□□□ 0.52
THUMPD1-204ENST00000569768 RTL5Q5HYW3 569 aaPredicted RBP18.32■□□□□ 0.52
THUMPD1-204ENST00000569768 PTPN12Q05209 780 aaKnown RBP18.31■□□□□ 0.52
THUMPD1-204ENST00000569768 ERFEQ4G0M1 354 aa18.31■□□□□ 0.52
THUMPD1-204ENST00000569768 ERC1Q8IUD2 1116 aa18.31■□□□□ 0.52
THUMPD1-204ENST00000569768 SYNE4Q8N205 404 aa18.31■□□□□ 0.52
THUMPD1-204ENST00000569768 CNBD1Q8NA66 436 aa18.31■□□□□ 0.52
THUMPD1-204ENST00000569768 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
THUMPD1-204ENST00000569768 MSH5O43196 834 aa18.3■□□□□ 0.52
THUMPD1-204ENST00000569768 SERPINB2P05120 415 aa18.3■□□□□ 0.52
THUMPD1-204ENST00000569768 GTF2E1P29083 439 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms