RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-218ENST00000569569 ERFEQ4G0M1 354 aa17.78■□□□□ 0.44
HERPUD1-218ENST00000569569 UTP14AQ9BVJ6 771 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-218ENST00000569569 VAMP4O75379 141 aa17.77■□□□□ 0.44
HERPUD1-218ENST00000569569 NPR1P16066 1061 aa17.77■□□□□ 0.44
HERPUD1-218ENST00000569569 RIC3Q7Z5B4 369 aa17.77■□□□□ 0.44
HERPUD1-218ENST00000569569 NLRP10Q86W26 655 aa17.77■□□□□ 0.44
HERPUD1-218ENST00000569569 DDX58O95786 925 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-218ENST00000569569 TNRC6CQ9HCJ0 1690 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-218ENST00000569569 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
HERPUD1-218ENST00000569569 RNF123Q5XPI4 1314 aa17.75■□□□□ 0.43
HERPUD1-218ENST00000569569 RIC1Q4ADV7 1423 aa17.75■□□□□ 0.43
HERPUD1-218ENST00000569569 TCERG1O14776 1098 aaKnown RBP17.75■□□□□ 0.43
HERPUD1-218ENST00000569569 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
HERPUD1-218ENST00000569569 SLC10A5Q5PT55 438 aa17.75■□□□□ 0.43
HERPUD1-218ENST00000569569 ZNF784Q8NCA9 323 aaPredicted RBP17.75■□□□□ 0.43
HERPUD1-218ENST00000569569 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
HERPUD1-218ENST00000569569 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
HERPUD1-218ENST00000569569 ALDH1B1P30837 517 aa17.74■□□□□ 0.43
HERPUD1-218ENST00000569569 CACNB1Q02641 598 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-218ENST00000569569 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-218ENST00000569569 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-218ENST00000569569 CRY2Q49AN0 593 aa17.74■□□□□ 0.43
HERPUD1-218ENST00000569569 TRMT112Q9UI30 125 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-218ENST00000569569 LAMB2P55268 1798 aa17.74■□□□□ 0.43
HERPUD1-218ENST00000569569 ATP5J2-PTCD1G3V325 749 aa17.73■□□□□ 0.43
HERPUD1-218ENST00000569569 NLRP3Q96P20 1036 aa17.73■□□□□ 0.43
HERPUD1-218ENST00000569569 E9PSI1 815 aa17.72■□□□□ 0.43
HERPUD1-218ENST00000569569 C21orf2O43822 256 aa17.72■□□□□ 0.43
HERPUD1-218ENST00000569569 PRPF40BQ6NWY9 871 aaKnown RBP17.72■□□□□ 0.43
HERPUD1-218ENST00000569569 KSR2Q6VAB6 950 aa17.72■□□□□ 0.43
HERPUD1-218ENST00000569569 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
HERPUD1-218ENST00000569569 DICER1Q9UPY3 1922 aaKnown RBP17.71■□□□□ 0.43
HERPUD1-218ENST00000569569 SOGA3Q5TF21 947 aa17.71■□□□□ 0.43
HERPUD1-218ENST00000569569 G2E3Q7L622 706 aa17.71■□□□□ 0.43
HERPUD1-218ENST00000569569 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
HERPUD1-218ENST00000569569 MYD88Q99836 296 aa17.71■□□□□ 0.43
HERPUD1-218ENST00000569569 METTL22Q9BUU2 404 aaPredicted RBP17.71■□□□□ 0.43
HERPUD1-218ENST00000569569 ZNF219Q9P2Y4 722 aaPredicted RBP17.71■□□□□ 0.43
HERPUD1-218ENST00000569569 ADCY9O60503 1353 aa17.7■□□□□ 0.42
HERPUD1-218ENST00000569569 PI4KAP2A4QPH2 592 aa17.7■□□□□ 0.42
HERPUD1-218ENST00000569569 HOXA10P31260 410 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-218ENST00000569569 SLFN5Q08AF3 891 aa17.7■□□□□ 0.42
HERPUD1-218ENST00000569569 PI4KAP1Q8N8J0 262 aa17.7■□□□□ 0.42
HERPUD1-218ENST00000569569 MAP3K2Q9Y2U5 619 aa17.7■□□□□ 0.42
HERPUD1-218ENST00000569569 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
HERPUD1-218ENST00000569569 FLIIQ13045 1269 aa17.69■□□□□ 0.42
HERPUD1-218ENST00000569569 C9orf131Q5VYM1 1079 aa17.69■□□□□ 0.42
HERPUD1-218ENST00000569569 SYNE4Q8N205 404 aa17.69■□□□□ 0.42
HERPUD1-218ENST00000569569 CCDC191Q8NCU4 936 aa17.69■□□□□ 0.42
HERPUD1-218ENST00000569569 C7orf43Q8WVR3 580 aa17.69■□□□□ 0.42
HERPUD1-218ENST00000569569 RBM17Q96I25 401 aaKnown RBP17.69■□□□□ 0.42
HERPUD1-218ENST00000569569 HCLS1P14317 486 aaPredicted RBP17.68■□□□□ 0.42
HERPUD1-218ENST00000569569 RASSF7Q02833 373 aa17.68■□□□□ 0.42
HERPUD1-218ENST00000569569 C3orf67Q6ZVT6 689 aa17.68■□□□□ 0.42
HERPUD1-218ENST00000569569 ZNF428Q96B54 188 aa17.68■□□□□ 0.42
HERPUD1-218ENST00000569569 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
HERPUD1-218ENST00000569569 CRAMP1Q96RY5 1269 aa17.68■□□□□ 0.42
HERPUD1-218ENST00000569569 TAF1P21675 1872 aa17.67■□□□□ 0.42
HERPUD1-218ENST00000569569 NFKBIEO00221 500 aa17.67■□□□□ 0.42
HERPUD1-218ENST00000569569 LMNB1P20700 586 aa17.67■□□□□ 0.42
HERPUD1-218ENST00000569569 NEXNQ0ZGT2 675 aa17.67■□□□□ 0.42
HERPUD1-218ENST00000569569 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
HERPUD1-218ENST00000569569 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
HERPUD1-218ENST00000569569 RNF181Q9P0P0 153 aa17.67■□□□□ 0.42
HERPUD1-218ENST00000569569 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
HERPUD1-218ENST00000569569 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
HERPUD1-218ENST00000569569 CWC25Q9NXE8 425 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-218ENST00000569569 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
HERPUD1-218ENST00000569569 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
HERPUD1-218ENST00000569569 TRMT2AQ8IZ69 625 aaKnown RBP17.65■□□□□ 0.42
HERPUD1-218ENST00000569569 TAOK3Q9H2K8 898 aa17.65■□□□□ 0.42
HERPUD1-218ENST00000569569 LTBP3Q9NS15 1303 aa17.65■□□□□ 0.42
HERPUD1-218ENST00000569569 MYH3P11055 1940 aa17.64■□□□□ 0.42
HERPUD1-218ENST00000569569 IRS4O14654 1257 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-218ENST00000569569 PCCAP05165 728 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-218ENST00000569569 IGKV5-2P06315 115 aa17.64■□□□□ 0.41
HERPUD1-218ENST00000569569 PRELPP51888 382 aa17.64■□□□□ 0.41
HERPUD1-218ENST00000569569 CC2D2BQ6DHV5 1058 aa17.64■□□□□ 0.41
HERPUD1-218ENST00000569569 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
HERPUD1-218ENST00000569569 DNAAF4Q8WXU2 420 aa17.64■□□□□ 0.41
HERPUD1-218ENST00000569569 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-218ENST00000569569 DDX46Q7L014 1031 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-218ENST00000569569 GPBP1L1Q9HC44 474 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-218ENST00000569569 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
HERPUD1-218ENST00000569569 BBOX1O75936 387 aa17.62■□□□□ 0.41
HERPUD1-218ENST00000569569 GRIPAP1Q4V328 841 aa17.62■□□□□ 0.41
HERPUD1-218ENST00000569569 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
HERPUD1-218ENST00000569569 ZNF526Q8TF50 670 aaPredicted RBP17.62■□□□□ 0.41
HERPUD1-218ENST00000569569 ABCC4O15439 1325 aa17.62■□□□□ 0.41
HERPUD1-218ENST00000569569 ZC3H4Q9UPT8 1303 aaKnown RBP17.62■□□□□ 0.41
HERPUD1-218ENST00000569569 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
HERPUD1-218ENST00000569569 PPEF1O14829 653 aaPredicted RBP17.61■□□□□ 0.41
HERPUD1-218ENST00000569569 FKBP4Q02790 459 aaKnown RBP eCLIP17.61■□□□□ 0.41
HERPUD1-218ENST00000569569 CWF19L2Q2TBE0 894 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-218ENST00000569569 TMX4Q9H1E5 349 aaPredicted RBP17.61■□□□□ 0.41
HERPUD1-218ENST00000569569 PDE8AO60658 829 aa17.6■□□□□ 0.41
HERPUD1-218ENST00000569569 GRAPQ13588 217 aa17.6■□□□□ 0.41
HERPUD1-218ENST00000569569 LINS1Q8NG48 757 aa17.6■□□□□ 0.41
HERPUD1-218ENST00000569569 GRAPLQ8TC17 118 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms