RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 CWC25Q9NXE8 425 aaPredicted RBP11.8□□□□□ -0.52
LINC00555-201ENST00000569288 NBPF7P0C2Y1 421 aaPredicted RBP11.79□□□□□ -0.52
LINC00555-201ENST00000569288 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
LINC00555-201ENST00000569288 AIMP1Q12904 312 aaKnown RBP11.79□□□□□ -0.52
LINC00555-201ENST00000569288 FAM161AQ3B820 660 aa11.79□□□□□ -0.52
LINC00555-201ENST00000569288 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
LINC00555-201ENST00000569288 TICAM2Q86XR7 235 aa11.79□□□□□ -0.52
LINC00555-201ENST00000569288 BACH2Q9BYV9 841 aa11.79□□□□□ -0.52
LINC00555-201ENST00000569288 TFCP2L1Q9NZI6 479 aa11.79□□□□□ -0.52
LINC00555-201ENST00000569288 LRRFIP2Q9Y608 721 aaKnown RBP11.79□□□□□ -0.52
LINC00555-201ENST00000569288 PNPLA7Q6ZV29 1317 aa11.79□□□□□ -0.52
LINC00555-201ENST00000569288 CASP7P55210 303 aa11.78□□□□□ -0.52
LINC00555-201ENST00000569288 R3HDM1Q15032 1099 aaKnown RBP11.78□□□□□ -0.52
LINC00555-201ENST00000569288 PARP10Q53GL7 1025 aa11.78□□□□□ -0.52
LINC00555-201ENST00000569288 ANKRD45Q5TZF3 282 aa11.78□□□□□ -0.52
LINC00555-201ENST00000569288 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
LINC00555-201ENST00000569288 LRP5O75197 1615 aa11.78□□□□□ -0.52
LINC00555-201ENST00000569288 BCORQ6W2J9 1755 aa11.77□□□□□ -0.52
LINC00555-201ENST00000569288 PCCAP05165 728 aaPredicted RBP11.77□□□□□ -0.53
LINC00555-201ENST00000569288 PDE4AP27815 886 aa11.77□□□□□ -0.53
LINC00555-201ENST00000569288 BMP2KLQ5H9B9 411 aa11.77□□□□□ -0.53
LINC00555-201ENST00000569288 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
LINC00555-201ENST00000569288 KIF1BPQ96EK5 621 aa11.77□□□□□ -0.53
LINC00555-201ENST00000569288 MYD88Q99836 296 aa11.77□□□□□ -0.53
LINC00555-201ENST00000569288 COPRSQ9NQ92 184 aa11.77□□□□□ -0.53
LINC00555-201ENST00000569288 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
LINC00555-201ENST00000569288 AOX1Q06278 1338 aa11.77□□□□□ -0.53
LINC00555-201ENST00000569288 CDHR2Q9BYE9 1310 aa11.77□□□□□ -0.53
LINC00555-201ENST00000569288 NUP98P52948 1817 aa11.76□□□□□ -0.53
LINC00555-201ENST00000569288 GNPATO15228 680 aa11.76□□□□□ -0.53
LINC00555-201ENST00000569288 TRAPPC3LQ5T215 181 aa11.76□□□□□ -0.53
LINC00555-201ENST00000569288 TTLL7Q6ZT98 887 aa11.76□□□□□ -0.53
LINC00555-201ENST00000569288 ZBTB38Q8NAP3 1195 aaPredicted RBP11.76□□□□□ -0.53
LINC00555-201ENST00000569288 LRRCC1Q9C099 1032 aa11.76□□□□□ -0.53
LINC00555-201ENST00000569288 C1orf115Q9H7X2 142 aa11.76□□□□□ -0.53
LINC00555-201ENST00000569288 STAP2Q9UGK3 403 aa11.76□□□□□ -0.53
LINC00555-201ENST00000569288 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
LINC00555-201ENST00000569288 SCN7AQ01118 1682 aa11.75□□□□□ -0.53
LINC00555-201ENST00000569288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
LINC00555-201ENST00000569288 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
LINC00555-201ENST00000569288 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
LINC00555-201ENST00000569288 COL23A1Q86Y22 540 aaPredicted RBP11.75□□□□□ -0.53
LINC00555-201ENST00000569288 ZNF34Q8IZ26 560 aa11.75□□□□□ -0.53
LINC00555-201ENST00000569288 KAZALD1Q96I82 304 aa11.75□□□□□ -0.53
LINC00555-201ENST00000569288 ZBTB1Q9Y2K1 713 aa11.75□□□□□ -0.53
LINC00555-201ENST00000569288 PNMA6EA0A0J9YXQ4 647 aa11.74□□□□□ -0.53
LINC00555-201ENST00000569288 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
LINC00555-201ENST00000569288 CSF1RP07333 972 aa11.74□□□□□ -0.53
LINC00555-201ENST00000569288 AMIGO3Q86WK7 504 aa11.74□□□□□ -0.53
LINC00555-201ENST00000569288 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
LINC00555-201ENST00000569288 IL27Q8NEV9 243 aa11.74□□□□□ -0.53
LINC00555-201ENST00000569288 MTFR1LQ9H019 292 aa11.74□□□□□ -0.53
LINC00555-201ENST00000569288 SURF6O75683 361 aaKnown RBP11.73□□□□□ -0.53
LINC00555-201ENST00000569288 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
LINC00555-201ENST00000569288 GPR108Q9NPR9 543 aa11.73□□□□□ -0.53
LINC00555-201ENST00000569288 NARFQ9UHQ1 456 aa11.73□□□□□ -0.53
LINC00555-201ENST00000569288 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
LINC00555-201ENST00000569288 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
LINC00555-201ENST00000569288 EPB41L2O43491 1005 aaKnown RBP11.72□□□□□ -0.53
LINC00555-201ENST00000569288 CIAO1O76071 339 aa11.72□□□□□ -0.53
LINC00555-201ENST00000569288 RGS3P49796 1198 aa11.72□□□□□ -0.53
LINC00555-201ENST00000569288 G3BP1Q13283 466 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00555-201ENST00000569288 NLRP10Q86W26 655 aa11.72□□□□□ -0.53
LINC00555-201ENST00000569288 PLEKHM2Q8IWE5 1019 aa11.72□□□□□ -0.53
LINC00555-201ENST00000569288 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
LINC00555-201ENST00000569288 LNPKQ9C0E8 428 aa11.72□□□□□ -0.53
LINC00555-201ENST00000569288 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
LINC00555-201ENST00000569288 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
LINC00555-201ENST00000569288 TTC41PQ6P2S7 1318 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 CAMTA2O94983 1202 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 RFC4P35249 363 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 FOXO4P98177 505 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 NLGN1Q8N2Q7 840 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 RHPN1Q8TCX5 695 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
LINC00555-201ENST00000569288 ZBTB3Q9H5J0 574 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 BICC1Q9H694 974 aaKnown RBP11.71□□□□□ -0.53
LINC00555-201ENST00000569288 SPON1Q9HCB6 807 aa11.71□□□□□ -0.53
LINC00555-201ENST00000569288 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.53
LINC00555-201ENST00000569288 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
LINC00555-201ENST00000569288 ATP5J2-PTCD1G3V325 749 aa11.7□□□□□ -0.54
LINC00555-201ENST00000569288 GYS1P13807 737 aa11.7□□□□□ -0.54
LINC00555-201ENST00000569288 RFX5P48382 616 aaPredicted RBP11.7□□□□□ -0.54
LINC00555-201ENST00000569288 C8orf34Q49A92 452 aa11.7□□□□□ -0.54
LINC00555-201ENST00000569288 SLC10A5Q5PT55 438 aa11.7□□□□□ -0.54
LINC00555-201ENST00000569288 UBE3BQ7Z3V4 1068 aa11.7□□□□□ -0.54
LINC00555-201ENST00000569288 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
LINC00555-201ENST00000569288 RTL9Q8NET4 1388 aa11.69□□□□□ -0.54
LINC00555-201ENST00000569288 PDE8AO60658 829 aa11.69□□□□□ -0.54
LINC00555-201ENST00000569288 ZPR1O75312 459 aa11.69□□□□□ -0.54
LINC00555-201ENST00000569288 PHF14O94880 888 aa11.69□□□□□ -0.54
LINC00555-201ENST00000569288 IL15P40933 162 aaPredicted RBP11.69□□□□□ -0.54
LINC00555-201ENST00000569288 PDE1AP54750 535 aa11.69□□□□□ -0.54
LINC00555-201ENST00000569288 PTPN12Q05209 780 aaKnown RBP11.69□□□□□ -0.54
LINC00555-201ENST00000569288 ARFGEF2Q9Y6D5 1785 aa11.69□□□□□ -0.54
LINC00555-201ENST00000569288 SRCAPQ6ZRS2 3230 aa11.69□□□□□ -0.54
LINC00555-201ENST00000569288 ERC2O15083 957 aa11.68□□□□□ -0.54
LINC00555-201ENST00000569288 PTGER2P43116 358 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms