RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 HSPA1BP0DMV9 641 aaKnown RBP8.39□□□□□ -1.07
CDH13-212ENST00000569144 TGFB2P61812 414 aa8.39□□□□□ -1.07
CDH13-212ENST00000569144 KMT5BQ4FZB7 885 aa8.39□□□□□ -1.07
CDH13-212ENST00000569144 ARHGAP27Q6ZUM4 889 aa8.39□□□□□ -1.07
CDH13-212ENST00000569144 BCS1LQ9Y276 419 aa8.39□□□□□ -1.07
CDH13-212ENST00000569144 TAF1LQ8IZX4 1826 aa8.38□□□□□ -1.07
CDH13-212ENST00000569144 KDM2BQ8NHM5 1336 aa8.38□□□□□ -1.07
CDH13-212ENST00000569144 CD46P15529 392 aa8.38□□□□□ -1.07
CDH13-212ENST00000569144 HOXC9P31274 260 aa8.38□□□□□ -1.07
CDH13-212ENST00000569144 SSTR3P32745 418 aaPredicted RBP8.38□□□□□ -1.07
CDH13-212ENST00000569144 HDGFL2Q7Z4V5 671 aaPredicted RBP8.38□□□□□ -1.07
CDH13-212ENST00000569144 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
CDH13-212ENST00000569144 PRR14Q9BWN1 585 aa8.38□□□□□ -1.07
CDH13-212ENST00000569144 KIAA1551Q9HCM1 1747 aa8.37□□□□□ -1.07
CDH13-212ENST00000569144 UBR3Q6ZT12 1888 aa8.37□□□□□ -1.07
CDH13-212ENST00000569144 GCGRP47871 477 aa8.37□□□□□ -1.07
CDH13-212ENST00000569144 C9orf131Q5VYM1 1079 aa8.37□□□□□ -1.07
CDH13-212ENST00000569144 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
CDH13-212ENST00000569144 SMC1BQ8NDV3 1235 aa8.37□□□□□ -1.07
CDH13-212ENST00000569144 KCPQ6ZWJ8 1503 aa8.37□□□□□ -1.07
CDH13-212ENST00000569144 KIF13BQ9NQT8 1826 aa8.36□□□□□ -1.07
CDH13-212ENST00000569144 MAP3K19Q56UN5 1328 aa8.36□□□□□ -1.07
CDH13-212ENST00000569144 PCDH11XQ9BZA7 1347 aa8.36□□□□□ -1.07
CDH13-212ENST00000569144 PCDH11YQ9BZA8 1340 aa8.36□□□□□ -1.07
CDH13-212ENST00000569144 A0A0G2JLW4 131 aa8.36□□□□□ -1.07
CDH13-212ENST00000569144 ACTN4O43707 911 aaKnown RBP8.36□□□□□ -1.07
CDH13-212ENST00000569144 MMP10P09238 476 aa8.36□□□□□ -1.07
CDH13-212ENST00000569144 MPRIPQ6WCQ1 1025 aa8.36□□□□□ -1.07
CDH13-212ENST00000569144 RAPGEF4Q8WZA2 1011 aa8.36□□□□□ -1.07
CDH13-212ENST00000569144 RTL1A6NKG5 1358 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 PCNTO95613 3336 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 MS4A1P11836 297 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 TATP17735 454 aaPredicted RBP8.35□□□□□ -1.07
CDH13-212ENST00000569144 AMPHP49418 695 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 NBPF6Q5VWK0 638 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 LINC00116Q8NCU8 138 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 NBPF4Q96M43 638 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 RRAGCQ9HB90 399 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 TERF2IPQ9NYB0 399 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
CDH13-212ENST00000569144 ROCK2O75116 1388 aaKnown RBP8.35□□□□□ -1.07
CDH13-212ENST00000569144 TNRC6CQ9HCJ0 1690 aaKnown RBP8.34□□□□□ -1.07
CDH13-212ENST00000569144 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
CDH13-212ENST00000569144 DPEP1P16444 411 aa8.34□□□□□ -1.07
CDH13-212ENST00000569144 SIK1P57059 783 aa8.34□□□□□ -1.07
CDH13-212ENST00000569144 TMC1Q8TDI8 760 aa8.34□□□□□ -1.07
CDH13-212ENST00000569144 SLC12A5Q9H2X9 1139 aa8.34□□□□□ -1.07
CDH13-212ENST00000569144 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
CDH13-212ENST00000569144 RNF181Q9P0P0 153 aa8.34□□□□□ -1.07
CDH13-212ENST00000569144 PKD1L3Q7Z443 1732 aa8.34□□□□□ -1.07
CDH13-212ENST00000569144 N4BP2Q86UW6 1770 aaPredicted RBP8.33□□□□□ -1.08
CDH13-212ENST00000569144 CYP27B1O15528 508 aa8.33□□□□□ -1.08
CDH13-212ENST00000569144 COPS2P61201 443 aa8.33□□□□□ -1.08
CDH13-212ENST00000569144 SMG6Q86US8 1419 aaKnown RBP8.33□□□□□ -1.08
CDH13-212ENST00000569144 NLGN1Q8N2Q7 840 aa8.33□□□□□ -1.08
CDH13-212ENST00000569144 USHBP1Q8N6Y0 703 aa8.33□□□□□ -1.08
CDH13-212ENST00000569144 PIGBQ92521 554 aa8.33□□□□□ -1.08
CDH13-212ENST00000569144 COG3Q96JB2 828 aa8.33□□□□□ -1.08
CDH13-212ENST00000569144 DCAF5Q96JK2 942 aa8.33□□□□□ -1.08
CDH13-212ENST00000569144 MTRQ99707 1265 aa8.33□□□□□ -1.08
CDH13-212ENST00000569144 RGPD2P0DJD1 1756 aa8.33□□□□□ -1.08
CDH13-212ENST00000569144 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
CDH13-212ENST00000569144 KCNA3P22001 575 aa8.32□□□□□ -1.08
CDH13-212ENST00000569144 TMF1P82094 1093 aa8.32□□□□□ -1.08
CDH13-212ENST00000569144 FUT2Q10981 343 aa8.32□□□□□ -1.08
CDH13-212ENST00000569144 ITPK1Q13572 414 aa8.32□□□□□ -1.08
CDH13-212ENST00000569144 BLOC1S3Q6QNY0 202 aa8.32□□□□□ -1.08
CDH13-212ENST00000569144 L3MBTL2Q969R5 705 aa8.32□□□□□ -1.08
CDH13-212ENST00000569144 BEGAINQ9BUH8 593 aa8.32□□□□□ -1.08
CDH13-212ENST00000569144 MAP2P11137 1827 aaKnown RBP8.31□□□□□ -1.08
CDH13-212ENST00000569144 KDM4AO75164 1064 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 FBLN1P23142 703 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 NEUROD2Q15784 382 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 PUS10Q3MIT2 529 aaKnown RBP8.31□□□□□ -1.08
CDH13-212ENST00000569144 TJAP1Q5JTD0 557 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 TRAPPC3LQ5T215 181 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 KDM4CQ9H3R0 1056 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 IL21Q9HBE4 155 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 PLA2G2EQ9NZK7 142 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 PIM2Q9P1W9 311 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 BRCA1P38398 1863 aaKnown RBP8.31□□□□□ -1.08
CDH13-212ENST00000569144 C4AP0C0L4 1744 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 ARFGEF1Q9Y6D6 1849 aa8.31□□□□□ -1.08
CDH13-212ENST00000569144 ITGBL1O95965 494 aaPredicted RBP8.3□□□□□ -1.08
CDH13-212ENST00000569144 VEGFAP15692 232 aaPredicted RBP8.3□□□□□ -1.08
CDH13-212ENST00000569144 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
CDH13-212ENST00000569144 DALRD3Q5D0E6 543 aaKnown RBP8.3□□□□□ -1.08
CDH13-212ENST00000569144 NUTM1Q86Y26 1132 aa8.3□□□□□ -1.08
CDH13-212ENST00000569144 PUS7Q96PZ0 661 aaKnown RBP8.3□□□□□ -1.08
CDH13-212ENST00000569144 PRDM10Q9NQV6 1147 aa8.3□□□□□ -1.08
CDH13-212ENST00000569144 RTCBQ9Y3I0 505 aaKnown RBP8.3□□□□□ -1.08
CDH13-212ENST00000569144 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
CDH13-212ENST00000569144 ITGB4P16144 1822 aa8.29□□□□□ -1.08
CDH13-212ENST00000569144 GYS1P13807 737 aa8.29□□□□□ -1.08
CDH13-212ENST00000569144 KCNC4Q03721 635 aa8.29□□□□□ -1.08
CDH13-212ENST00000569144 RRS1Q15050 365 aaKnown RBP8.29□□□□□ -1.08
CDH13-212ENST00000569144 ZNF516Q92618 1163 aa8.29□□□□□ -1.08
CDH13-212ENST00000569144 TMOD3Q9NYL9 352 aa8.29□□□□□ -1.08
CDH13-212ENST00000569144 INSRP06213 1382 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms