RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 ANKRD13DQ6ZTN6 518 aa32.75■■■□□ 2.83
CCNF-205ENST00000569093 UTP14AQ9BVJ6 771 aaKnown RBP32.75■■■□□ 2.83
CCNF-205ENST00000569093 OLFM4Q6UX06 510 aa32.74■■■□□ 2.83
CCNF-205ENST00000569093 NLRP10Q86W26 655 aa32.74■■■□□ 2.83
CCNF-205ENST00000569093 TSPYL6Q8N831 410 aa32.74■■■□□ 2.83
CCNF-205ENST00000569093 PLBD2Q8NHP8 589 aa32.74■■■□□ 2.83
CCNF-205ENST00000569093 ZNF428Q96B54 188 aa32.74■■■□□ 2.83
CCNF-205ENST00000569093 NMRK2Q9NPI5 230 aa32.74■■■□□ 2.83
CCNF-205ENST00000569093 C3orf67Q6ZVT6 689 aa32.73■■■□□ 2.83
CCNF-205ENST00000569093 ALDH1B1P30837 517 aa32.72■■■□□ 2.83
CCNF-205ENST00000569093 PHAXQ9H814 394 aaKnown RBP32.72■■■□□ 2.83
CCNF-205ENST00000569093 RIC1Q4ADV7 1423 aa32.71■■■□□ 2.83
CCNF-205ENST00000569093 NCBP3Q53F19 620 aaKnown RBP32.71■■■□□ 2.83
CCNF-205ENST00000569093 SYNE4Q8N205 404 aa32.71■■■□□ 2.83
CCNF-205ENST00000569093 SOGA3Q5TF21 947 aa32.7■■■□□ 2.83
CCNF-205ENST00000569093 TAOK3Q9H2K8 898 aa32.7■■■□□ 2.83
CCNF-205ENST00000569093 SLC10A5Q5PT55 438 aa32.69■■■□□ 2.82
CCNF-205ENST00000569093 RPGRQ92834 1020 aaKnown RBP32.69■■■□□ 2.82
CCNF-205ENST00000569093 HOXA10P31260 410 aaPredicted RBP32.68■■■□□ 2.82
CCNF-205ENST00000569093 CCDC93Q567U6 631 aa32.68■■■□□ 2.82
CCNF-205ENST00000569093 TRMT112Q9UI30 125 aaKnown RBP32.68■■■□□ 2.82
CCNF-205ENST00000569093 IL16Q14005 1332 aa32.68■■■□□ 2.82
CCNF-205ENST00000569093 LTBP3Q9NS15 1303 aa32.68■■■□□ 2.82
CCNF-205ENST00000569093 ATP5J2-PTCD1G3V325 749 aa32.67■■■□□ 2.82
CCNF-205ENST00000569093 NLRP3Q96P20 1036 aa32.67■■■□□ 2.82
CCNF-205ENST00000569093 TIAM2Q8IVF5 1701 aa32.67■■■□□ 2.82
CCNF-205ENST00000569093 KDM2BQ8NHM5 1336 aa32.67■■■□□ 2.82
CCNF-205ENST00000569093 ISCA1Q9BUE6 129 aa32.66■■■□□ 2.82
CCNF-205ENST00000569093 DICER1Q9UPY3 1922 aaKnown RBP32.65■■■□□ 2.82
CCNF-205ENST00000569093 HCLS1P14317 486 aaPredicted RBP32.65■■■□□ 2.82
CCNF-205ENST00000569093 CCDC30Q5VVM6 783 aa32.65■■■□□ 2.82
CCNF-205ENST00000569093 RRAGCQ9HB90 399 aa32.65■■■□□ 2.82
CCNF-205ENST00000569093 ZC3H4Q9UPT8 1303 aaKnown RBP32.65■■■□□ 2.82
CCNF-205ENST00000569093 TCERG1O14776 1098 aaKnown RBP32.64■■■□□ 2.82
CCNF-205ENST00000569093 RIC3Q7Z5B4 369 aa32.64■■■□□ 2.82
CCNF-205ENST00000569093 RBM17Q96I25 401 aaKnown RBP32.64■■■□□ 2.82
CCNF-205ENST00000569093 RNF123Q5XPI4 1314 aa32.63■■■□□ 2.81
CCNF-205ENST00000569093 CRAMP1Q96RY5 1269 aa32.63■■■□□ 2.81
CCNF-205ENST00000569093 GOLGA2Q08379 1002 aa32.62■■■□□ 2.81
CCNF-205ENST00000569093 SLC51AQ86UW1 340 aa32.62■■■□□ 2.81
CCNF-205ENST00000569093 WDR63Q8IWG1 891 aa32.62■■■□□ 2.81
CCNF-205ENST00000569093 SH3TC1Q8TE82 1336 aa32.61■■■□□ 2.81
CCNF-205ENST00000569093 GLTPD2A6NH11 291 aa32.61■■■□□ 2.81
CCNF-205ENST00000569093 FKBP4Q02790 459 aaKnown RBP eCLIP32.61■■■□□ 2.81
CCNF-205ENST00000569093 TWISTNBQ3B726 338 aaPredicted RBP32.61■■■□□ 2.81
CCNF-205ENST00000569093 LAMB2P55268 1798 aa32.6■■■□□ 2.81
CCNF-205ENST00000569093 FANCIQ9NVI1 1328 aa32.6■■■□□ 2.81
CCNF-205ENST00000569093 RTKN2Q8IZC4 609 aa32.6■■■□□ 2.81
CCNF-205ENST00000569093 FAM89AQ96GI7 184 aa32.59■■■□□ 2.81
CCNF-205ENST00000569093 CHMP4AQ9BY43 222 aa32.59■■■□□ 2.81
CCNF-205ENST00000569093 ZNF277Q9NRM2 450 aaPredicted RBP32.59■■■□□ 2.81
CCNF-205ENST00000569093 SPINK5Q9NQ38 1064 aaPredicted RBP32.58■■■□□ 2.81
CCNF-205ENST00000569093 TOMM70O94826 608 aa32.57■■■□□ 2.8
CCNF-205ENST00000569093 TRIM28Q13263 835 aaKnown RBP32.57■■■□□ 2.8
CCNF-205ENST00000569093 RTL5Q5HYW3 569 aaPredicted RBP32.57■■■□□ 2.8
CCNF-205ENST00000569093 MYD88Q99836 296 aa32.57■■■□□ 2.8
CCNF-205ENST00000569093 PPEF1O14829 653 aaPredicted RBP32.56■■■□□ 2.8
CCNF-205ENST00000569093 SNED1Q8TER0 1413 aa32.56■■■□□ 2.8
CCNF-205ENST00000569093 ABCC4O15439 1325 aa32.54■■■□□ 2.8
CCNF-205ENST00000569093 DPY19L2Q6NUT2 758 aa32.54■■■□□ 2.8
CCNF-205ENST00000569093 STK31Q9BXU1 1019 aa32.54■■■□□ 2.8
CCNF-205ENST00000569093 DDX60Q8IY21 1712 aaKnown RBP32.54■■■□□ 2.8
CCNF-205ENST00000569093 EXOSC9Q06265 439 aaKnown RBP32.53■■■□□ 2.8
CCNF-205ENST00000569093 CC2D2BQ6DHV5 1058 aa32.53■■■□□ 2.8
CCNF-205ENST00000569093 G2E3Q7L622 706 aa32.53■■■□□ 2.8
CCNF-205ENST00000569093 C16orf71Q8IYS4 520 aaPredicted RBP32.53■■■□□ 2.8
CCNF-205ENST00000569093 TAF1P21675 1872 aa32.52■■■□□ 2.8
CCNF-205ENST00000569093 DDX58O95786 925 aaKnown RBP32.52■■■□□ 2.8
CCNF-205ENST00000569093 MAP3K2Q9Y2U5 619 aa32.52■■■□□ 2.8
CCNF-205ENST00000569093 SLC4A2P04920 1241 aa32.51■■■□□ 2.79
CCNF-205ENST00000569093 PSMD1Q99460 953 aa32.51■■■□□ 2.79
CCNF-205ENST00000569093 METTL22Q9BUU2 404 aaPredicted RBP32.51■■■□□ 2.79
CCNF-205ENST00000569093 VAMP4O75379 141 aa32.5■■■□□ 2.79
CCNF-205ENST00000569093 IARSP41252 1262 aaKnown RBP32.5■■■□□ 2.79
CCNF-205ENST00000569093 PI4KAP2A4QPH2 592 aa32.49■■■□□ 2.79
CCNF-205ENST00000569093 POTECB2RU33 542 aa32.49■■■□□ 2.79
CCNF-205ENST00000569093 DDNO94850 711 aaPredicted RBP32.49■■■□□ 2.79
CCNF-205ENST00000569093 VEGFAP15692 232 aaPredicted RBP32.49■■■□□ 2.79
CCNF-205ENST00000569093 KSR2Q6VAB6 950 aa32.49■■■□□ 2.79
CCNF-205ENST00000569093 DDX46Q7L014 1031 aaKnown RBP32.49■■■□□ 2.79
CCNF-205ENST00000569093 PI4KAP1Q8N8J0 262 aa32.49■■■□□ 2.79
CCNF-205ENST00000569093 ATP6V0A2Q9Y487 856 aa32.49■■■□□ 2.79
CCNF-205ENST00000569093 IRS4O14654 1257 aaPredicted RBP32.48■■■□□ 2.79
CCNF-205ENST00000569093 RBM46Q8TBY0 533 aaKnown RBP32.48■■■□□ 2.79
CCNF-205ENST00000569093 JARID2Q92833 1246 aaPredicted RBP32.48■■■□□ 2.79
CCNF-205ENST00000569093 BBOX1O75936 387 aa32.47■■■□□ 2.79
CCNF-205ENST00000569093 HSPA6P17066 643 aa32.47■■■□□ 2.79
CCNF-205ENST00000569093 ZBTB38Q8NAP3 1195 aaPredicted RBP32.47■■■□□ 2.79
CCNF-205ENST00000569093 CCDC191Q8NCU4 936 aa32.47■■■□□ 2.79
CCNF-205ENST00000569093 SF3B3Q15393 1217 aaKnown RBP32.46■■■□□ 2.79
CCNF-205ENST00000569093 WDR90Q96KV7 1748 aa32.46■■■□□ 2.79
CCNF-205ENST00000569093 GRAPQ13588 217 aa32.45■■■□□ 2.79
CCNF-205ENST00000569093 GRIPAP1Q4V328 841 aa32.45■■■□□ 2.79
CCNF-205ENST00000569093 GRAPLQ8TC17 118 aaPredicted RBP32.45■■■□□ 2.79
CCNF-205ENST00000569093 CWC25Q9NXE8 425 aaPredicted RBP32.45■■■□□ 2.79
CCNF-205ENST00000569093 SP8Q8IXZ3 490 aa32.44■■■□□ 2.78
CCNF-205ENST00000569093 TMX4Q9H1E5 349 aaPredicted RBP32.44■■■□□ 2.78
CCNF-205ENST00000569093 MYH16Q9H6N6 1097 aa32.44■■■□□ 2.78
CCNF-205ENST00000569093 IGKV5-2P06315 115 aa32.43■■■□□ 2.78
CCNF-205ENST00000569093 ZNF521Q96K83 1311 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms