RNA–Protein interactions for RNA: ENST00000568900.5

SPNS1-212, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2

Gene SPNS1, Length 2,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-212ENST00000568900 INTS5Q6P9B9 1019 aaKnown RBP25.64■■□□□ 1.7
SPNS1-212ENST00000568900 SASH1O94885 1247 aa25.63■■□□□ 1.69
SPNS1-212ENST00000568900 RFX5P48382 616 aaPredicted RBP25.63■■□□□ 1.69
SPNS1-212ENST00000568900 TRIM28Q13263 835 aaKnown RBP25.63■■□□□ 1.69
SPNS1-212ENST00000568900 CHMP3Q9Y3E7 222 aa25.63■■□□□ 1.69
SPNS1-212ENST00000568900 CICQ96RK0 1608 aaPredicted RBP25.63■■□□□ 1.69
SPNS1-212ENST00000568900 DZIP3Q86Y13 1208 aaKnown RBP25.63■■□□□ 1.69
SPNS1-212ENST00000568900 TBC1D2BQ9UPU7 963 aa25.63■■□□□ 1.69
SPNS1-212ENST00000568900 ANKRD36CQ5JPF3 1778 aa25.62■■□□□ 1.69
SPNS1-212ENST00000568900 COPRSQ9NQ92 184 aa25.62■■□□□ 1.69
SPNS1-212ENST00000568900 NUP98P52948 1817 aa25.62■■□□□ 1.69
SPNS1-212ENST00000568900 TRIM6-TRIM34B2RNG4 842 aa25.62■■□□□ 1.69
SPNS1-212ENST00000568900 PTPN12Q05209 780 aaKnown RBP25.62■■□□□ 1.69
SPNS1-212ENST00000568900 FAM182BQ5T319 152 aa25.62■■□□□ 1.69
SPNS1-212ENST00000568900 CASC1Q6TDU7 716 aa25.62■■□□□ 1.69
SPNS1-212ENST00000568900 GPTP24298 496 aa25.61■■□□□ 1.69
SPNS1-212ENST00000568900 SLC4A3P48751 1232 aa25.61■■□□□ 1.69
SPNS1-212ENST00000568900 MYH14Q7Z406 1995 aaKnown RBP25.61■■□□□ 1.69
SPNS1-212ENST00000568900 EIF5P55010 431 aaKnown RBP25.61■■□□□ 1.69
SPNS1-212ENST00000568900 HSP90AB3PQ58FF7 597 aa25.61■■□□□ 1.69
SPNS1-212ENST00000568900 PTF1AQ7RTS3 328 aa25.61■■□□□ 1.69
SPNS1-212ENST00000568900 DAXXQ9UER7 740 aaPredicted RBP25.61■■□□□ 1.69
SPNS1-212ENST00000568900 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.61■■□□□ 1.69
SPNS1-212ENST00000568900 ATRNO75882 1429 aa25.6■■□□□ 1.69
SPNS1-212ENST00000568900 PI4K2BQ8TCG2 481 aa25.6■■□□□ 1.69
SPNS1-212ENST00000568900 RILPL2Q969X0 211 aa25.6■■□□□ 1.69
SPNS1-212ENST00000568900 TRPC5Q9UL62 973 aaPredicted RBP25.6■■□□□ 1.69
SPNS1-212ENST00000568900 RREB1Q92766 1687 aa25.6■■□□□ 1.69
SPNS1-212ENST00000568900 IFIT2P09913 472 aaKnown RBP25.6■■□□□ 1.69
SPNS1-212ENST00000568900 AACSQ86V21 672 aa25.6■■□□□ 1.69
SPNS1-212ENST00000568900 ERVV-1B6SEH8 477 aa25.58■■□□□ 1.69
SPNS1-212ENST00000568900 FAM89AQ96GI7 184 aa25.58■■□□□ 1.69
SPNS1-212ENST00000568900 COL5A3P25940 1745 aaPredicted RBP25.58■■□□□ 1.69
SPNS1-212ENST00000568900 PCCAP05165 728 aaPredicted RBP25.58■■□□□ 1.69
SPNS1-212ENST00000568900 NLRP10Q86W26 655 aa25.58■■□□□ 1.69
SPNS1-212ENST00000568900 BTAF1O14981 1849 aa25.58■■□□□ 1.68
SPNS1-212ENST00000568900 USP42Q9H9J4 1324 aaKnown RBP25.57■■□□□ 1.68
SPNS1-212ENST00000568900 RBM25P49756 843 aaKnown RBP25.57■■□□□ 1.68
SPNS1-212ENST00000568900 AK9Q5TCS8 1911 aa25.57■■□□□ 1.68
SPNS1-212ENST00000568900 NHSQ6T4R5 1651 aa25.57■■□□□ 1.68
SPNS1-212ENST00000568900 TTC41PQ6P2S7 1318 aa25.57■■□□□ 1.68
SPNS1-212ENST00000568900 EIF5BO60841 1220 aaKnown RBP25.57■■□□□ 1.68
SPNS1-212ENST00000568900 ZBTB38Q8NAP3 1195 aaPredicted RBP25.57■■□□□ 1.68
SPNS1-212ENST00000568900 ZNF831Q5JPB2 1677 aa25.56■■□□□ 1.68
SPNS1-212ENST00000568900 EAF2Q96CJ1 260 aaPredicted RBP25.56■■□□□ 1.68
SPNS1-212ENST00000568900 MAP4K4O95819 1239 aaPredicted RBP25.56■■□□□ 1.68
SPNS1-212ENST00000568900 GPATCH3Q96I76 525 aa25.56■■□□□ 1.68
SPNS1-212ENST00000568900 KCNQ4P56696 695 aa25.54■■□□□ 1.68
SPNS1-212ENST00000568900 CCDC8Q9H0W5 538 aaPredicted RBP25.54■■□□□ 1.68
SPNS1-212ENST00000568900 ECHDC1Q9NTX5 307 aa25.54■■□□□ 1.68
SPNS1-212ENST00000568900 SEPT12Q8IYM1 358 aa25.54■■□□□ 1.68
SPNS1-212ENST00000568900 ONECUT3O60422 494 aaPredicted RBP25.53■■□□□ 1.68
SPNS1-212ENST00000568900 GLRX3O76003 335 aaKnown RBP25.53■■□□□ 1.68
SPNS1-212ENST00000568900 LINC00116Q8NCU8 138 aa25.53■■□□□ 1.68
SPNS1-212ENST00000568900 ERC2O15083 957 aa25.53■■□□□ 1.68
SPNS1-212ENST00000568900 TFCP2Q12800 502 aa25.53■■□□□ 1.68
SPNS1-212ENST00000568900 SYNE4Q8N205 404 aa25.53■■□□□ 1.68
SPNS1-212ENST00000568900 QTRT2Q9H974 415 aaKnown RBP25.53■■□□□ 1.68
SPNS1-212ENST00000568900 BECN1Q14457 450 aa25.52■■□□□ 1.68
SPNS1-212ENST00000568900 TLR7Q9NYK1 1049 aaKnown RBP25.52■■□□□ 1.68
SPNS1-212ENST00000568900 PLA2G12BQ9BX93 195 aa25.51■■□□□ 1.67
SPNS1-212ENST00000568900 TRMT112Q9UI30 125 aaKnown RBP25.51■■□□□ 1.67
SPNS1-212ENST00000568900 SBF2Q86WG5 1849 aa25.51■■□□□ 1.67
SPNS1-212ENST00000568900 UBN2Q6ZU65 1347 aa25.51■■□□□ 1.67
SPNS1-212ENST00000568900 CDHR2Q9BYE9 1310 aa25.51■■□□□ 1.67
SPNS1-212ENST00000568900 CHMLP26374 656 aa25.51■■□□□ 1.67
SPNS1-212ENST00000568900 ZNF34Q8IZ26 560 aa25.51■■□□□ 1.67
SPNS1-212ENST00000568900 ZNF594Q96JF6 807 aaPredicted RBP25.5■■□□□ 1.67
SPNS1-212ENST00000568900 CAMTA2O94983 1202 aa25.49■■□□□ 1.67
SPNS1-212ENST00000568900 CNTROBQ8N137 903 aa25.49■■□□□ 1.67
SPNS1-212ENST00000568900 CCDC85AQ96PX6 553 aaPredicted RBP25.49■■□□□ 1.67
SPNS1-212ENST00000568900 TNNI3KQ59H18 835 aa25.49■■□□□ 1.67
SPNS1-212ENST00000568900 FPGT-TNNI3KV9GXZ4 949 aa25.49■■□□□ 1.67
SPNS1-212ENST00000568900 REC8O95072 547 aa25.48■■□□□ 1.67
SPNS1-212ENST00000568900 CCDC57Q2TAC2 916 aa25.48■■□□□ 1.67
SPNS1-212ENST00000568900 USP26Q9BXU7 913 aa25.48■■□□□ 1.67
SPNS1-212ENST00000568900 ATG9AQ7Z3C6 839 aa25.48■■□□□ 1.67
SPNS1-212ENST00000568900 ESYT1Q9BSJ8 1104 aa25.48■■□□□ 1.67
SPNS1-212ENST00000568900 MYH3P11055 1940 aa25.48■■□□□ 1.67
SPNS1-212ENST00000568900 IRS4O14654 1257 aaPredicted RBP25.47■■□□□ 1.67
SPNS1-212ENST00000568900 CSF1RP07333 972 aa25.46■■□□□ 1.67
SPNS1-212ENST00000568900 LRRC24Q50LG9 513 aa25.46■■□□□ 1.67
SPNS1-212ENST00000568900 KIF2CQ99661 725 aa25.46■■□□□ 1.67
SPNS1-212ENST00000568900 TBC1D2Q9BYX2 928 aa25.46■■□□□ 1.67
SPNS1-212ENST00000568900 EYA2O00167 538 aa25.46■■□□□ 1.67
SPNS1-212ENST00000568900 IL15P40933 162 aaPredicted RBP25.46■■□□□ 1.67
SPNS1-212ENST00000568900 CNTNAP4Q9C0A0 1308 aa25.45■■□□□ 1.67
SPNS1-212ENST00000568900 DBNLQ9UJU6 430 aaKnown RBP25.44■■□□□ 1.66
SPNS1-212ENST00000568900 CCNL1Q9UK58 526 aaPredicted RBP25.44■■□□□ 1.66
SPNS1-212ENST00000568900 BCORQ6W2J9 1755 aa25.44■■□□□ 1.66
SPNS1-212ENST00000568900 FAM177BA6PVY3 158 aa25.44■■□□□ 1.66
SPNS1-212ENST00000568900 IFIT5Q13325 482 aaKnown RBP25.44■■□□□ 1.66
SPNS1-212ENST00000568900 SUSD4Q5VX71 490 aa25.44■■□□□ 1.66
SPNS1-212ENST00000568900 PUS3Q9BZE2 481 aaKnown RBP25.44■■□□□ 1.66
SPNS1-212ENST00000568900 CTSWP56202 376 aa25.43■■□□□ 1.66
SPNS1-212ENST00000568900 CIAO1O76071 339 aa25.43■■□□□ 1.66
SPNS1-212ENST00000568900 TAF7LQ5H9L4 462 aa25.43■■□□□ 1.66
SPNS1-212ENST00000568900 TTLL11Q8NHH1 800 aa25.43■■□□□ 1.66
SPNS1-212ENST00000568900 LY75O60449 1722 aa25.43■■□□□ 1.66
SPNS1-212ENST00000568900 BOLA2Q9H3K6 86 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms