RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 UBN2Q6ZU65 1347 aa12.89□□□□□ -0.35
HERPUD1-216ENST00000568814 ATP5J2-PTCD1G3V325 749 aa12.89□□□□□ -0.35
HERPUD1-216ENST00000568814 RLBP1P12271 317 aa12.89□□□□□ -0.35
HERPUD1-216ENST00000568814 CWF19L2Q2TBE0 894 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-216ENST00000568814 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
HERPUD1-216ENST00000568814 ITPRIPQ8IWB1 547 aa12.89□□□□□ -0.35
HERPUD1-216ENST00000568814 TMEM57Q8N5G2 664 aa12.89□□□□□ -0.35
HERPUD1-216ENST00000568814 PANK1Q8TE04 598 aa12.89□□□□□ -0.35
HERPUD1-216ENST00000568814 TNNQ9UQP3 1299 aa12.89□□□□□ -0.35
HERPUD1-216ENST00000568814 HSP90B1P14625 803 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 TM4SF1P30408 202 aa12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 GCKRQ14397 625 aa12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 NBPF5PQ86XG9 351 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 UTP14AQ9BVJ6 771 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
HERPUD1-216ENST00000568814 GRM8O00222 908 aa12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 POLRMTO00411 1230 aaKnown RBP12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 PCCAP05165 728 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 MMP10P09238 476 aa12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 POLD1P28340 1107 aa12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 TPTE2Q6XPS3 522 aa12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 C9orf78Q9NZ63 289 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
HERPUD1-216ENST00000568814 NRXN2Q9P2S2 1712 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 NPHP1O15259 732 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 ZBTB7AO95365 584 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 NTSR2O95665 410 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 SERPINB2P05120 415 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 GNAI3P08754 354 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 DDR1Q08345 913 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 C20orf194Q5TEA3 1177 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 ZBTB38Q8NAP3 1195 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 UTYO14607 1347 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 CDHR2Q9BYE9 1310 aa12.86□□□□□ -0.35
HERPUD1-216ENST00000568814 H7C1W4 665 aa12.85□□□□□ -0.35
HERPUD1-216ENST00000568814 NEFLP07196 543 aa12.85□□□□□ -0.35
HERPUD1-216ENST00000568814 UBTFL1P0CB47 393 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-216ENST00000568814 GTF2E1P29083 439 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-216ENST00000568814 ST5P78524 1137 aa12.85□□□□□ -0.35
HERPUD1-216ENST00000568814 AAMPQ13685 434 aa12.85□□□□□ -0.35
HERPUD1-216ENST00000568814 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
HERPUD1-216ENST00000568814 LAMB2P55268 1798 aa12.84□□□□□ -0.35
HERPUD1-216ENST00000568814 CHD4Q14839 1912 aa12.84□□□□□ -0.35
HERPUD1-216ENST00000568814 UBE3BQ7Z3V4 1068 aa12.84□□□□□ -0.35
HERPUD1-216ENST00000568814 SPON1Q9HCB6 807 aa12.84□□□□□ -0.35
HERPUD1-216ENST00000568814 FAM177BA6PVY3 158 aa12.83□□□□□ -0.36
HERPUD1-216ENST00000568814 PRR5LQ6MZQ0 368 aa12.83□□□□□ -0.36
HERPUD1-216ENST00000568814 FAM89AQ96GI7 184 aa12.83□□□□□ -0.36
HERPUD1-216ENST00000568814 MEIS3Q99687 375 aa12.83□□□□□ -0.36
HERPUD1-216ENST00000568814 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-216ENST00000568814 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
HERPUD1-216ENST00000568814 ZBTB7BO15156 539 aaPredicted RBP12.82□□□□□ -0.36
HERPUD1-216ENST00000568814 NBPF7P0C2Y1 421 aaPredicted RBP12.82□□□□□ -0.36
HERPUD1-216ENST00000568814 CASP7P55210 303 aa12.82□□□□□ -0.36
HERPUD1-216ENST00000568814 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
HERPUD1-216ENST00000568814 CRBNQ96SW2 442 aa12.82□□□□□ -0.36
HERPUD1-216ENST00000568814 SGIP1Q9BQI5 828 aa12.82□□□□□ -0.36
HERPUD1-216ENST00000568814 PLA2G12BQ9BX93 195 aa12.82□□□□□ -0.36
HERPUD1-216ENST00000568814 C10orf71Q711Q0 1435 aa12.81□□□□□ -0.36
HERPUD1-216ENST00000568814 PDE8AO60658 829 aa12.81□□□□□ -0.36
HERPUD1-216ENST00000568814 GNAI2P04899 355 aa12.81□□□□□ -0.36
HERPUD1-216ENST00000568814 ERFEQ4G0M1 354 aa12.81□□□□□ -0.36
HERPUD1-216ENST00000568814 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
HERPUD1-216ENST00000568814 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
HERPUD1-216ENST00000568814 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
HERPUD1-216ENST00000568814 PTGER2P43116 358 aa12.8□□□□□ -0.36
HERPUD1-216ENST00000568814 RTL5Q5HYW3 569 aaPredicted RBP12.8□□□□□ -0.36
HERPUD1-216ENST00000568814 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
HERPUD1-216ENST00000568814 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
HERPUD1-216ENST00000568814 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
HERPUD1-216ENST00000568814 MYH3P11055 1940 aa12.8□□□□□ -0.36
HERPUD1-216ENST00000568814 UTRNP46939 3433 aa12.79□□□□□ -0.36
HERPUD1-216ENST00000568814 PDE6BP35913 854 aa12.79□□□□□ -0.36
HERPUD1-216ENST00000568814 CTSWP56202 376 aa12.79□□□□□ -0.36
HERPUD1-216ENST00000568814 SUCLG2Q96I99 432 aa12.79□□□□□ -0.36
HERPUD1-216ENST00000568814 NLRP3Q96P20 1036 aa12.79□□□□□ -0.36
HERPUD1-216ENST00000568814 LRRFIP2Q9Y608 721 aaKnown RBP12.79□□□□□ -0.36
HERPUD1-216ENST00000568814 KIF13BQ9NQT8 1826 aa12.78□□□□□ -0.36
HERPUD1-216ENST00000568814 HCLS1P14317 486 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-216ENST00000568814 IRX6P78412 446 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-216ENST00000568814 CCDC152Q4G0S7 254 aa12.78□□□□□ -0.36
HERPUD1-216ENST00000568814 SYNE4Q8N205 404 aa12.78□□□□□ -0.36
HERPUD1-216ENST00000568814 EXOC6Q8TAG9 804 aa12.78□□□□□ -0.36
HERPUD1-216ENST00000568814 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-216ENST00000568814 BICC1Q9H694 974 aaKnown RBP12.78□□□□□ -0.36
HERPUD1-216ENST00000568814 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.36
HERPUD1-216ENST00000568814 CEP350Q5VT06 3117 aa12.77□□□□□ -0.37
HERPUD1-216ENST00000568814 ANKRD31Q8N7Z5 1873 aa12.77□□□□□ -0.37
HERPUD1-216ENST00000568814 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
HERPUD1-216ENST00000568814 FOXO4P98177 505 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms