RNA–Protein interactions for RNA: ENST00000568698.5

CDH16-208, Transcript of cadherin 16, humanhuman

TSL 5

Gene CDH16, Length 2,026 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-208ENST00000568698 SCN7AQ01118 1682 aa20.23■□□□□ 0.83
CDH16-208ENST00000568698 NUP98P52948 1817 aa20.23■□□□□ 0.83
CDH16-208ENST00000568698 PI4KAP2A4QPH2 592 aa20.23■□□□□ 0.83
CDH16-208ENST00000568698 TRAPPC3LQ5T215 181 aa20.23■□□□□ 0.83
CDH16-208ENST00000568698 TBC1D9Q6ZT07 1266 aa20.23■□□□□ 0.83
CDH16-208ENST00000568698 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
CDH16-208ENST00000568698 PI4KAP1Q8N8J0 262 aa20.23■□□□□ 0.83
CDH16-208ENST00000568698 STK32BQ9NY57 414 aa20.23■□□□□ 0.83
CDH16-208ENST00000568698 F6X3S4 739 aa20.22■□□□□ 0.83
CDH16-208ENST00000568698 CAMTA2O94983 1202 aa20.22■□□□□ 0.83
CDH16-208ENST00000568698 DDIT3P35638 169 aa20.22■□□□□ 0.83
CDH16-208ENST00000568698 ATP10DQ9P241 1426 aa20.22■□□□□ 0.83
CDH16-208ENST00000568698 MAP3K15Q6ZN16 1313 aa20.22■□□□□ 0.83
CDH16-208ENST00000568698 KSR2Q6VAB6 950 aa20.22■□□□□ 0.83
CDH16-208ENST00000568698 COL23A1Q86Y22 540 aaPredicted RBP20.22■□□□□ 0.83
CDH16-208ENST00000568698 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
CDH16-208ENST00000568698 ZBTB3Q9H5J0 574 aa20.22■□□□□ 0.83
CDH16-208ENST00000568698 A0A087WZG4 1122 aa20.2■□□□□ 0.83
CDH16-208ENST00000568698 DDX11L8A8MPP1 907 aa20.2■□□□□ 0.83
CDH16-208ENST00000568698 HLFQ16534 295 aa20.2■□□□□ 0.83
CDH16-208ENST00000568698 SPRYD3Q8NCJ5 442 aa20.2■□□□□ 0.83
CDH16-208ENST00000568698 SRP68Q9UHB9 627 aaKnown RBP20.2■□□□□ 0.83
CDH16-208ENST00000568698 NARFQ9UHQ1 456 aa20.2■□□□□ 0.83
CDH16-208ENST00000568698 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
CDH16-208ENST00000568698 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
CDH16-208ENST00000568698 KIF6Q6ZMV9 814 aa20.2■□□□□ 0.82
CDH16-208ENST00000568698 ARXQ96QS3 562 aa20.2■□□□□ 0.82
CDH16-208ENST00000568698 BCL2L12Q9HB09 334 aa20.2■□□□□ 0.82
CDH16-208ENST00000568698 MAP3K2Q9Y2U5 619 aa20.2■□□□□ 0.82
CDH16-208ENST00000568698 ERVV-1B6SEH8 477 aa20.19■□□□□ 0.82
CDH16-208ENST00000568698 PLEKHM2Q8IWE5 1019 aa20.19■□□□□ 0.82
CDH16-208ENST00000568698 N4BP2Q86UW6 1770 aaPredicted RBP20.19■□□□□ 0.82
CDH16-208ENST00000568698 RFC4P35249 363 aa20.19■□□□□ 0.82
CDH16-208ENST00000568698 RIC3Q7Z5B4 369 aa20.19■□□□□ 0.82
CDH16-208ENST00000568698 ANKRD36CQ5JPF3 1778 aa20.18■□□□□ 0.82
CDH16-208ENST00000568698 USPL1Q5W0Q7 1092 aa20.18■□□□□ 0.82
CDH16-208ENST00000568698 GIGYF2Q6Y7W6 1299 aaKnown RBP20.18■□□□□ 0.82
CDH16-208ENST00000568698 FLAD1Q8NFF5 587 aa20.18■□□□□ 0.82
CDH16-208ENST00000568698 DNAAF4Q8WXU2 420 aa20.18■□□□□ 0.82
CDH16-208ENST00000568698 KIF2CQ99661 725 aa20.18■□□□□ 0.82
CDH16-208ENST00000568698 PDGFDQ9GZP0 370 aaPredicted RBP20.18■□□□□ 0.82
CDH16-208ENST00000568698 TTC22Q5TAA0 569 aa20.17■□□□□ 0.82
CDH16-208ENST00000568698 CEP85Q6P2H3 762 aa20.17■□□□□ 0.82
CDH16-208ENST00000568698 PTMSP20962 102 aa20.17■□□□□ 0.82
CDH16-208ENST00000568698 PXDNLA1KZ92 1463 aa20.16■□□□□ 0.82
CDH16-208ENST00000568698 METTL22Q9BUU2 404 aaPredicted RBP20.16■□□□□ 0.82
CDH16-208ENST00000568698 SOCS7O14512 581 aa20.15■□□□□ 0.82
CDH16-208ENST00000568698 ZPR1O75312 459 aa20.15■□□□□ 0.82
CDH16-208ENST00000568698 GYS1P13807 737 aa20.15■□□□□ 0.82
CDH16-208ENST00000568698 GSPT1P15170 499 aaKnown RBP20.15■□□□□ 0.82
CDH16-208ENST00000568698 CASZ1Q86V15 1759 aa20.15■□□□□ 0.82
CDH16-208ENST00000568698 RGL2O15211 777 aa20.15■□□□□ 0.82
CDH16-208ENST00000568698 HMMRO75330 724 aa20.15■□□□□ 0.82
CDH16-208ENST00000568698 BEND3Q5T5X7 828 aa20.15■□□□□ 0.82
CDH16-208ENST00000568698 K7ELQ4 463 aaPredicted RBP20.14■□□□□ 0.81
CDH16-208ENST00000568698 IGKV5-2P06315 115 aa20.14■□□□□ 0.81
CDH16-208ENST00000568698 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.81
CDH16-208ENST00000568698 TCIRG1Q13488 830 aa20.14■□□□□ 0.81
CDH16-208ENST00000568698 SLC4A10Q6U841 1118 aa20.14■□□□□ 0.81
CDH16-208ENST00000568698 CLEC4GQ6UXB4 293 aa20.14■□□□□ 0.81
CDH16-208ENST00000568698 AFDNP55196 1824 aaKnown RBP20.14■□□□□ 0.81
CDH16-208ENST00000568698 MYD88Q99836 296 aa20.14■□□□□ 0.81
CDH16-208ENST00000568698 R3HDM1Q15032 1099 aaKnown RBP20.13■□□□□ 0.81
CDH16-208ENST00000568698 ISCA1Q9BUE6 129 aa20.13■□□□□ 0.81
CDH16-208ENST00000568698 ATP5J2-PTCD1G3V325 749 aa20.12■□□□□ 0.81
CDH16-208ENST00000568698 TRAK2O60296 914 aa20.12■□□□□ 0.81
CDH16-208ENST00000568698 CASC1Q6TDU7 716 aa20.12■□□□□ 0.81
CDH16-208ENST00000568698 ZNF34Q8IZ26 560 aa20.12■□□□□ 0.81
CDH16-208ENST00000568698 GBP4Q96PP9 640 aa20.12■□□□□ 0.81
CDH16-208ENST00000568698 RAB3GAP1Q15042 981 aa20.12■□□□□ 0.81
CDH16-208ENST00000568698 RABEP1Q15276 862 aa20.12■□□□□ 0.81
CDH16-208ENST00000568698 CWF19L2Q2TBE0 894 aaKnown RBP20.12■□□□□ 0.81
CDH16-208ENST00000568698 LINS1Q8NG48 757 aa20.12■□□□□ 0.81
CDH16-208ENST00000568698 ISY1Q9ULR0 285 aaKnown RBP20.12■□□□□ 0.81
CDH16-208ENST00000568698 UBN2Q6ZU65 1347 aa20.11■□□□□ 0.81
CDH16-208ENST00000568698 FSD2A1L4K1 749 aa20.11■□□□□ 0.81
CDH16-208ENST00000568698 GOLGA6L3A6NEY3 463 aa20.11■□□□□ 0.81
CDH16-208ENST00000568698 TBC1D9BQ66K14 1250 aa20.11■□□□□ 0.81
CDH16-208ENST00000568698 UBE2Q2Q8WVN8 375 aa20.11■□□□□ 0.81
CDH16-208ENST00000568698 ZNF652Q9Y2D9 606 aa20.11■□□□□ 0.81
CDH16-208ENST00000568698 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
CDH16-208ENST00000568698 NEURL1BA8MQ27 555 aa20.1■□□□□ 0.81
CDH16-208ENST00000568698 GPTP24298 496 aa20.1■□□□□ 0.81
CDH16-208ENST00000568698 TRIM28Q13263 835 aaKnown RBP20.1■□□□□ 0.81
CDH16-208ENST00000568698 HSP90AB3PQ58FF7 597 aa20.1■□□□□ 0.81
CDH16-208ENST00000568698 MEIS3Q99687 375 aa20.1■□□□□ 0.81
CDH16-208ENST00000568698 HSP90AA1P07900 732 aaKnown RBP20.09■□□□□ 0.81
CDH16-208ENST00000568698 NEXNQ0ZGT2 675 aa20.09■□□□□ 0.81
CDH16-208ENST00000568698 FAM43AQ8N2R8 423 aa20.09■□□□□ 0.81
CDH16-208ENST00000568698 SRCIN1Q9C0H9 1055 aa20.09■□□□□ 0.81
CDH16-208ENST00000568698 PSDA5PKW4 1024 aaPredicted RBP20.09■□□□□ 0.81
CDH16-208ENST00000568698 NIP7Q9Y221 180 aaKnown RBP eCLIP20.09■□□□□ 0.81
CDH16-208ENST00000568698 TM4SF1P30408 202 aa20.08■□□□□ 0.8
CDH16-208ENST00000568698 NFIXQ14938 502 aa20.08■□□□□ 0.8
CDH16-208ENST00000568698 SKOR2Q2VWA4 1001 aaPredicted RBP20.08■□□□□ 0.8
CDH16-208ENST00000568698 NLRP10Q86W26 655 aa20.08■□□□□ 0.8
CDH16-208ENST00000568698 RTN4Q9NQC3 1192 aaKnown RBP20.08■□□□□ 0.8
CDH16-208ENST00000568698 ALDH1L1O75891 902 aa20.07■□□□□ 0.8
CDH16-208ENST00000568698 CCDC191Q8NCU4 936 aa20.07■□□□□ 0.8
CDH16-208ENST00000568698 TNPO1Q92973 898 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms