RNA–Protein interactions for RNA: ENST00000568359.1

SNX29-206, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-206ENST00000568359 TAF1DQ9H5J8 278 aaPredicted RBP7.18□□□□□ -1.26
SNX29-206ENST00000568359 ZNF277Q9NRM2 450 aaPredicted RBP7.18□□□□□ -1.26
SNX29-206ENST00000568359 RNF123Q5XPI4 1314 aa7.18□□□□□ -1.26
SNX29-206ENST00000568359 PASKQ96RG2 1323 aa7.18□□□□□ -1.26
SNX29-206ENST00000568359 ADAMTSL1Q8N6G6 1762 aa7.18□□□□□ -1.26
SNX29-206ENST00000568359 FAM177BA6PVY3 158 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 CAMTA2O94983 1202 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 LMOD1P29536 600 aaPredicted RBP7.17□□□□□ -1.26
SNX29-206ENST00000568359 EPHX2P34913 555 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 PIP4K2AP48426 406 aaPredicted RBP7.17□□□□□ -1.26
SNX29-206ENST00000568359 LBX1P52954 281 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 GRM1Q13255 1194 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 TPTE2Q6XPS3 522 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 RTKN2Q8IZC4 609 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 CCDC82Q8N4S0 544 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 JDP2Q8WYK2 163 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 RTF1Q92541 710 aaKnown RBP7.17□□□□□ -1.26
SNX29-206ENST00000568359 ZNF541Q9H0D2 1346 aa7.17□□□□□ -1.26
SNX29-206ENST00000568359 TRPM7Q96QT4 1865 aa7.16□□□□□ -1.26
SNX29-206ENST00000568359 IARSP41252 1262 aaKnown RBP7.16□□□□□ -1.26
SNX29-206ENST00000568359 MAP2K1Q02750 393 aaPredicted RBP7.16□□□□□ -1.26
SNX29-206ENST00000568359 DEFB115Q30KQ5 88 aa7.16□□□□□ -1.26
SNX29-206ENST00000568359 MAP1SQ66K74 1059 aaPredicted RBP7.16□□□□□ -1.26
SNX29-206ENST00000568359 CLEC4GQ6UXB4 293 aa7.16□□□□□ -1.26
SNX29-206ENST00000568359 ZNF428Q96B54 188 aa7.16□□□□□ -1.26
SNX29-206ENST00000568359 CFAP53Q96M91 514 aa7.16□□□□□ -1.26
SNX29-206ENST00000568359 MTMR7Q9Y216 660 aa7.16□□□□□ -1.26
SNX29-206ENST00000568359 NIP7Q9Y221 180 aaKnown RBP eCLIP7.16□□□□□ -1.26
SNX29-206ENST00000568359 GJA3Q9Y6H8 435 aa7.16□□□□□ -1.26
SNX29-206ENST00000568359 COL3A1P02461 1466 aaPredicted RBP7.16□□□□□ -1.26
SNX29-206ENST00000568359 THSD7BQ9C0I4 1608 aa7.16□□□□□ -1.26
SNX29-206ENST00000568359 ALDH1B1P30837 517 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 EIF6P56537 245 aaKnown RBP7.15□□□□□ -1.26
SNX29-206ENST00000568359 POLA2Q14181 598 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 FAM161AQ3B820 660 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 MIER1Q8N108 512 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 CNTROBQ8N137 903 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 GPC2Q8N158 579 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 IL17REQ8NFR9 667 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 RPGRQ92834 1020 aaKnown RBP7.15□□□□□ -1.26
SNX29-206ENST00000568359 ABHD8Q96I13 439 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 TMX4Q9H1E5 349 aaPredicted RBP7.15□□□□□ -1.26
SNX29-206ENST00000568359 WBP1LQ9NX94 342 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 KIF7Q2M1P5 1343 aa7.15□□□□□ -1.26
SNX29-206ENST00000568359 WDR33Q9C0J8 1336 aaKnown RBP7.15□□□□□ -1.26
SNX29-206ENST00000568359 TESPA1A2RU30 521 aaPredicted RBP7.14□□□□□ -1.27
SNX29-206ENST00000568359 RASSF10A6NK89 507 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 CCDC85CA6NKD9 419 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 ITGBL1O95965 494 aaPredicted RBP7.14□□□□□ -1.27
SNX29-206ENST00000568359 SNRPA1P09661 255 aaKnown RBP7.14□□□□□ -1.27
SNX29-206ENST00000568359 HSPA8P11142 646 aaKnown RBP7.14□□□□□ -1.27
SNX29-206ENST00000568359 CDK11BP21127 795 aaKnown RBP7.14□□□□□ -1.27
SNX29-206ENST00000568359 PRKAR2BP31323 418 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 ECE1P42892 770 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 NUP98P52948 1817 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 OLFM4Q6UX06 510 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 SYNE4Q8N205 404 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 CCER1Q8TC90 406 aaPredicted RBP7.14□□□□□ -1.27
SNX29-206ENST00000568359 CEMIPQ8WUJ3 1361 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 TRAIPQ9BWF2 469 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 NYXQ9GZU5 481 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 USP16Q9Y5T5 823 aa7.14□□□□□ -1.27
SNX29-206ENST00000568359 FZD9O00144 591 aa7.13□□□□□ -1.27
SNX29-206ENST00000568359 STK25O00506 426 aa7.13□□□□□ -1.27
SNX29-206ENST00000568359 RIOK3O14730 519 aaKnown RBP7.13□□□□□ -1.27
SNX29-206ENST00000568359 KCNQ3O43525 872 aa7.13□□□□□ -1.27
SNX29-206ENST00000568359 NEFMP07197 916 aa7.13□□□□□ -1.27
SNX29-206ENST00000568359 KIF6Q6ZMV9 814 aa7.13□□□□□ -1.27
SNX29-206ENST00000568359 LARGE2Q8N3Y3 721 aa7.13□□□□□ -1.27
SNX29-206ENST00000568359 CAPNS2Q96L46 248 aa7.13□□□□□ -1.27
SNX29-206ENST00000568359 DDX21Q9NR30 783 aaKnown RBP eCLIP7.13□□□□□ -1.27
SNX29-206ENST00000568359 NUDCQ9Y266 331 aa7.13□□□□□ -1.27
SNX29-206ENST00000568359 PRAMEF22A3QJZ6 481 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 TCERG1O14776 1098 aaKnown RBP7.12□□□□□ -1.27
SNX29-206ENST00000568359 SEMA3EO15041 775 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 U2AF1L5P0DN76 240 aaPredicted RBP7.12□□□□□ -1.27
SNX29-206ENST00000568359 HSP90B1P14625 803 aaKnown RBP7.12□□□□□ -1.27
SNX29-206ENST00000568359 U2AF1Q01081 240 aaKnown RBP eCLIP7.12□□□□□ -1.27
SNX29-206ENST00000568359 MLLT1Q03111 559 aaPredicted RBP7.12□□□□□ -1.27
SNX29-206ENST00000568359 CC2D2BQ6DHV5 1058 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 MCM10Q7L590 875 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 POTEDQ86YR6 584 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 NIM1KQ8IY84 436 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 NGEFQ8N5V2 710 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 C7orf43Q8WVR3 580 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 PSMD1Q99460 953 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 KDM4CQ9H3R0 1056 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 LTBP1Q14766 1721 aa7.12□□□□□ -1.27
SNX29-206ENST00000568359 DLG5Q8TDM6 1919 aa7.11□□□□□ -1.27
SNX29-206ENST00000568359 ABCC12Q96J65 1359 aa7.11□□□□□ -1.27
SNX29-206ENST00000568359 KDM3BQ7LBC6 1761 aa7.11□□□□□ -1.27
SNX29-206ENST00000568359 PPEF1O14829 653 aaPredicted RBP7.11□□□□□ -1.27
SNX29-206ENST00000568359 GRIPAP1Q4V328 841 aa7.11□□□□□ -1.27
SNX29-206ENST00000568359 FOXD4L5Q5VV16 416 aaPredicted RBP7.11□□□□□ -1.27
SNX29-206ENST00000568359 CYP4F22Q6NT55 531 aa7.11□□□□□ -1.27
SNX29-206ENST00000568359 NUTM1Q86Y26 1132 aa7.11□□□□□ -1.27
SNX29-206ENST00000568359 FOXD4L4Q8WXT5 416 aaPredicted RBP7.11□□□□□ -1.27
SNX29-206ENST00000568359 RBM17Q96I25 401 aaKnown RBP7.11□□□□□ -1.27
SNX29-206ENST00000568359 PHACTR3Q96KR7 559 aa7.11□□□□□ -1.27
SNX29-206ENST00000568359 GPR101Q96P66 508 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms