RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 NEXNQ0ZGT2 675 aa13.01□□□□□ -0.33
CDH11-214ENST00000568340 POLA2Q14181 598 aa13.01□□□□□ -0.33
CDH11-214ENST00000568340 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
CDH11-214ENST00000568340 HSP90AB3PQ58FF7 597 aa13.01□□□□□ -0.33
CDH11-214ENST00000568340 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
CDH11-214ENST00000568340 CWC25Q9NXE8 425 aaPredicted RBP13.01□□□□□ -0.33
CDH11-214ENST00000568340 SRP68Q9UHB9 627 aaKnown RBP13.01□□□□□ -0.33
CDH11-214ENST00000568340 RTCBQ9Y3I0 505 aaKnown RBP13.01□□□□□ -0.33
CDH11-214ENST00000568340 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
CDH11-214ENST00000568340 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
CDH11-214ENST00000568340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
CDH11-214ENST00000568340 NTSR2O95665 410 aa13□□□□□ -0.33
CDH11-214ENST00000568340 UBTFL1P0CB47 393 aaPredicted RBP13□□□□□ -0.33
CDH11-214ENST00000568340 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
CDH11-214ENST00000568340 CENPQQ7L2Z9 268 aaPredicted RBP13□□□□□ -0.33
CDH11-214ENST00000568340 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
CDH11-214ENST00000568340 AK7Q96M32 723 aa13□□□□□ -0.33
CDH11-214ENST00000568340 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
CDH11-214ENST00000568340 PNPLA7Q6ZV29 1317 aa12.99□□□□□ -0.33
CDH11-214ENST00000568340 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
CDH11-214ENST00000568340 FOXO4P98177 505 aa12.99□□□□□ -0.33
CDH11-214ENST00000568340 UBE3BQ7Z3V4 1068 aa12.99□□□□□ -0.33
CDH11-214ENST00000568340 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
CDH11-214ENST00000568340 SSH3Q8TE77 659 aa12.99□□□□□ -0.33
CDH11-214ENST00000568340 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
CDH11-214ENST00000568340 COL4A1P02462 1669 aa12.99□□□□□ -0.33
CDH11-214ENST00000568340 GPTP24298 496 aa12.98□□□□□ -0.33
CDH11-214ENST00000568340 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
CDH11-214ENST00000568340 ATP8B2P98198 1209 aa12.98□□□□□ -0.33
CDH11-214ENST00000568340 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
CDH11-214ENST00000568340 ZBTB38Q8NAP3 1195 aaPredicted RBP12.98□□□□□ -0.33
CDH11-214ENST00000568340 BICC1Q9H694 974 aaKnown RBP12.98□□□□□ -0.33
CDH11-214ENST00000568340 TNRC6CQ9HCJ0 1690 aaKnown RBP12.98□□□□□ -0.33
CDH11-214ENST00000568340 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
CDH11-214ENST00000568340 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
CDH11-214ENST00000568340 GYS1P13807 737 aa12.97□□□□□ -0.33
CDH11-214ENST00000568340 PARP10Q53GL7 1025 aa12.97□□□□□ -0.33
CDH11-214ENST00000568340 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
CDH11-214ENST00000568340 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
CDH11-214ENST00000568340 SYNE4Q8N205 404 aa12.97□□□□□ -0.33
CDH11-214ENST00000568340 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
CDH11-214ENST00000568340 DCTPP1Q9H773 170 aa12.97□□□□□ -0.33
CDH11-214ENST00000568340 C9orf78Q9NZ63 289 aaPredicted RBP12.97□□□□□ -0.33
CDH11-214ENST00000568340 PPP1R42Q7Z4L9 355 aa12.96□□□□□ -0.33
CDH11-214ENST00000568340 COL23A1Q86Y22 540 aaPredicted RBP12.96□□□□□ -0.33
CDH11-214ENST00000568340 CASZ1Q86V15 1759 aa12.96□□□□□ -0.34
CDH11-214ENST00000568340 PHF14O94880 888 aa12.95□□□□□ -0.34
CDH11-214ENST00000568340 CSF1RP07333 972 aa12.95□□□□□ -0.34
CDH11-214ENST00000568340 BAG6P46379 1132 aa12.95□□□□□ -0.34
CDH11-214ENST00000568340 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
CDH11-214ENST00000568340 SKAP1Q86WV1 359 aa12.95□□□□□ -0.34
CDH11-214ENST00000568340 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
CDH11-214ENST00000568340 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
CDH11-214ENST00000568340 NOP58Q9Y2X3 529 aaKnown RBP12.95□□□□□ -0.34
CDH11-214ENST00000568340 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
CDH11-214ENST00000568340 HMGB2P26583 209 aaKnown RBP12.94□□□□□ -0.34
CDH11-214ENST00000568340 TM4SF1P30408 202 aa12.94□□□□□ -0.34
CDH11-214ENST00000568340 DDR1Q08345 913 aa12.94□□□□□ -0.34
CDH11-214ENST00000568340 NFIXQ14938 502 aa12.94□□□□□ -0.34
CDH11-214ENST00000568340 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
CDH11-214ENST00000568340 FAM89AQ96GI7 184 aa12.94□□□□□ -0.34
CDH11-214ENST00000568340 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDH11-214ENST00000568340 MYH3P11055 1940 aa12.93□□□□□ -0.34
CDH11-214ENST00000568340 CARMIL3Q8ND23 1372 aa12.93□□□□□ -0.34
CDH11-214ENST00000568340 SH3TC1Q8TE82 1336 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 SALL3Q9BXA9 1300 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 SRGAP3O43295 1099 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 PDE4AP27815 886 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 RFC4P35249 363 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 NUCB1Q02818 461 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 SF3B2Q13435 895 aaKnown RBP12.92□□□□□ -0.34
CDH11-214ENST00000568340 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 C3orf67Q6ZVT6 689 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 GCC1Q96CN9 775 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 UTP14AQ9BVJ6 771 aaKnown RBP12.92□□□□□ -0.34
CDH11-214ENST00000568340 COPRSQ9NQ92 184 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
CDH11-214ENST00000568340 IRS4O14654 1257 aaPredicted RBP12.91□□□□□ -0.34
CDH11-214ENST00000568340 ZPR1O75312 459 aa12.91□□□□□ -0.34
CDH11-214ENST00000568340 CTSWP56202 376 aa12.91□□□□□ -0.34
CDH11-214ENST00000568340 PTPN12Q05209 780 aaKnown RBP12.91□□□□□ -0.34
CDH11-214ENST00000568340 TTLL11Q8NHH1 800 aa12.91□□□□□ -0.34
CDH11-214ENST00000568340 HDAC5Q9UQL6 1122 aa12.91□□□□□ -0.34
CDH11-214ENST00000568340 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
CDH11-214ENST00000568340 HMMRO75330 724 aa12.9□□□□□ -0.34
CDH11-214ENST00000568340 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
CDH11-214ENST00000568340 ERFEQ4G0M1 354 aa12.9□□□□□ -0.34
CDH11-214ENST00000568340 RTL5Q5HYW3 569 aaPredicted RBP12.9□□□□□ -0.34
CDH11-214ENST00000568340 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
CDH11-214ENST00000568340 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
CDH11-214ENST00000568340 NUTM1Q86Y26 1132 aa12.9□□□□□ -0.34
CDH11-214ENST00000568340 FLAD1Q8NFF5 587 aa12.9□□□□□ -0.34
CDH11-214ENST00000568340 ARXQ96QS3 562 aa12.9□□□□□ -0.34
CDH11-214ENST00000568340 TFCP2L1Q9NZI6 479 aa12.9□□□□□ -0.34
CDH11-214ENST00000568340 TRMT112Q9UI30 125 aaKnown RBP12.9□□□□□ -0.34
CDH11-214ENST00000568340 PA2G4Q9UQ80 394 aaKnown RBP12.9□□□□□ -0.34
CDH11-214ENST00000568340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.9□□□□□ -0.34
CDH11-214ENST00000568340 ANKRD31Q8N7Z5 1873 aa12.9□□□□□ -0.34
CDH11-214ENST00000568340 PDE8AO60658 829 aa12.89□□□□□ -0.35
CDH11-214ENST00000568340 PDGFDQ9GZP0 370 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms