RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ABCC12Q96J65 1359 aa10.59□□□□□ -0.71
HDGFL3-205ENST00000568129 TAF1P21675 1872 aa10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 NFKBIEO00221 500 aa10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 ELL2O00472 640 aaPredicted RBP10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 VAMP4O75379 141 aa10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 GPTP24298 496 aa10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 ALDH1B1P30837 517 aa10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 PRELPP51888 382 aa10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 AIMP1Q12904 312 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 UTP14AQ9BVJ6 771 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 MYH3P11055 1940 aa10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 FANCIQ9NVI1 1328 aa10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.72
HDGFL3-205ENST00000568129 TWISTNBQ3B726 338 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-205ENST00000568129 SOGA3Q5TF21 947 aa10.57□□□□□ -0.72
HDGFL3-205ENST00000568129 PRPF40BQ6NWY9 871 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-205ENST00000568129 NUTM1Q86Y26 1132 aa10.57□□□□□ -0.72
HDGFL3-205ENST00000568129 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
HDGFL3-205ENST00000568129 PHAXQ9H814 394 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-205ENST00000568129 NPHP1O15259 732 aa10.56□□□□□ -0.72
HDGFL3-205ENST00000568129 LMNB1P20700 586 aa10.56□□□□□ -0.72
HDGFL3-205ENST00000568129 GTF2E1P29083 439 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-205ENST00000568129 C9orf131Q5VYM1 1079 aa10.56□□□□□ -0.72
HDGFL3-205ENST00000568129 TRMT2AQ8IZ69 625 aaKnown RBP10.56□□□□□ -0.72
HDGFL3-205ENST00000568129 TIAM2Q8IVF5 1701 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 FAM177BA6PVY3 158 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 C21orf2O43822 256 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 GOLGA2Q08379 1002 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 GRIPAP1Q4V328 841 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 CC2D2BQ6DHV5 1058 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 KSR2Q6VAB6 950 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 C3orf67Q6ZVT6 689 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 NLRP3Q96P20 1036 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 METTL22Q9BUU2 404 aaPredicted RBP10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 SH3TC1Q8TE82 1336 aa10.55□□□□□ -0.72
HDGFL3-205ENST00000568129 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
HDGFL3-205ENST00000568129 EXOSC9Q06265 439 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-205ENST00000568129 SF3B3Q15393 1217 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-205ENST00000568129 SYNE4Q8N205 404 aa10.54□□□□□ -0.72
HDGFL3-205ENST00000568129 CCDC191Q8NCU4 936 aa10.54□□□□□ -0.72
HDGFL3-205ENST00000568129 MYH16Q9H6N6 1097 aa10.54□□□□□ -0.72
HDGFL3-205ENST00000568129 TRMT112Q9UI30 125 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-205ENST00000568129 LRRC37AA6NMS7 1700 aa10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 KIF3CO14782 793 aa10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 SLC4A2P04920 1241 aa10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 RASSF7Q02833 373 aa10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 G2E3Q7L622 706 aa10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 RTKN2Q8IZC4 609 aa10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 ZBTB38Q8NAP3 1195 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 RBM17Q96I25 401 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 STK31Q9BXU1 1019 aa10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 WDR90Q96KV7 1748 aa10.53□□□□□ -0.72
HDGFL3-205ENST00000568129 PI4KAP2A4QPH2 592 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 ATP5J2-PTCD1G3V325 749 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 BBOX1O75936 387 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 PCCAP05165 728 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 IGKV5-2P06315 115 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 FKBP4Q02790 459 aaKnown RBP eCLIP10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 SLFN5Q08AF3 891 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 CCDC93Q567U6 631 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 PI4KAP1Q8N8J0 262 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 RPGRQ92834 1020 aaKnown RBP10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 PSMD1Q99460 953 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 TAOK3Q9H2K8 898 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 GPBP1L1Q9HC44 474 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 RNF181Q9P0P0 153 aa10.52□□□□□ -0.73
HDGFL3-205ENST00000568129 SCN4AP35499 1836 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 LTBP1Q14766 1721 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 GLTPD2A6NH11 291 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 E9PSI1 815 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 HCLS1P14317 486 aaPredicted RBP10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 C1QTNF8P60827 252 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 FLIIQ13045 1269 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 FAM89AQ96GI7 184 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 VPS33BQ9H267 617 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 MAP3K2Q9Y2U5 619 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 ABCC4O15439 1325 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 CDHR2Q9BYE9 1310 aa10.51□□□□□ -0.73
HDGFL3-205ENST00000568129 HSP90B1P14625 803 aaKnown RBP10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 DIEXFQ68CQ4 756 aaKnown RBP10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 OLFM4Q6UX06 510 aa10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 TMC4Q7Z404 712 aa10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 SP8Q8IXZ3 490 aa10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 ZNF428Q96B54 188 aa10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 MYD88Q99836 296 aa10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 CWC25Q9NXE8 425 aaPredicted RBP10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 ATP6V0A2Q9Y487 856 aa10.5□□□□□ -0.73
HDGFL3-205ENST00000568129 NEURL1BA8MQ27 555 aa10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 POTECB2RU33 542 aa10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 H7C1W4 665 aa10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 FZD9O00144 591 aa10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 IRS4O14654 1257 aaPredicted RBP10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 CASP7P55210 303 aa10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 GRAPQ13588 217 aa10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 MIER1Q8N108 512 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms