RNA–Protein interactions for RNA: ENST00000567547.1

NEIL1-214, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-214ENST00000567547 POLA2Q14181 598 aa13.96□□□□□ -0.17
NEIL1-214ENST00000567547 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
NEIL1-214ENST00000567547 UBE3BQ7Z3V4 1068 aa13.96□□□□□ -0.17
NEIL1-214ENST00000567547 PROM2Q8N271 834 aa13.96□□□□□ -0.17
NEIL1-214ENST00000567547 LAMB2P55268 1798 aa13.96□□□□□ -0.18
NEIL1-214ENST00000567547 USP42Q9H9J4 1324 aaKnown RBP13.95□□□□□ -0.18
NEIL1-214ENST00000567547 ZBTB38Q8NAP3 1195 aaPredicted RBP13.95□□□□□ -0.18
NEIL1-214ENST00000567547 KAZALD1Q96I82 304 aa13.95□□□□□ -0.18
NEIL1-214ENST00000567547 PLA2G12BQ9BX93 195 aa13.95□□□□□ -0.18
NEIL1-214ENST00000567547 UBN2Q6ZU65 1347 aa13.94□□□□□ -0.18
NEIL1-214ENST00000567547 PNMA6EA0A0J9YXQ4 647 aa13.94□□□□□ -0.18
NEIL1-214ENST00000567547 ZPR1O75312 459 aa13.94□□□□□ -0.18
NEIL1-214ENST00000567547 QSER1Q2KHR3 1735 aa13.94□□□□□ -0.18
NEIL1-214ENST00000567547 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
NEIL1-214ENST00000567547 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
NEIL1-214ENST00000567547 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
NEIL1-214ENST00000567547 TUBGCP6Q96RT7 1819 aa13.94□□□□□ -0.18
NEIL1-214ENST00000567547 SRGAP3O43295 1099 aa13.93□□□□□ -0.18
NEIL1-214ENST00000567547 GPTP24298 496 aa13.93□□□□□ -0.18
NEIL1-214ENST00000567547 NUCB1Q02818 461 aa13.93□□□□□ -0.18
NEIL1-214ENST00000567547 SF3B2Q13435 895 aaKnown RBP13.93□□□□□ -0.18
NEIL1-214ENST00000567547 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
NEIL1-214ENST00000567547 AKT1S1Q96B36 256 aa13.93□□□□□ -0.18
NEIL1-214ENST00000567547 BCL2L12Q9HB09 334 aa13.93□□□□□ -0.18
NEIL1-214ENST00000567547 PDZRN3Q9UPQ7 1066 aa13.93□□□□□ -0.18
NEIL1-214ENST00000567547 MYH3P11055 1940 aa13.92□□□□□ -0.18
NEIL1-214ENST00000567547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.92□□□□□ -0.18
NEIL1-214ENST00000567547 HSP90B1P14625 803 aaKnown RBP13.92□□□□□ -0.18
NEIL1-214ENST00000567547 RFC4P35249 363 aa13.92□□□□□ -0.18
NEIL1-214ENST00000567547 BAG6P46379 1132 aa13.92□□□□□ -0.18
NEIL1-214ENST00000567547 USPL1Q5W0Q7 1092 aa13.92□□□□□ -0.18
NEIL1-214ENST00000567547 AMIGO3Q86WK7 504 aa13.92□□□□□ -0.18
NEIL1-214ENST00000567547 CAMKK2Q96RR4 588 aa13.92□□□□□ -0.18
NEIL1-214ENST00000567547 NIP7Q9Y221 180 aaKnown RBP eCLIP13.92□□□□□ -0.18
NEIL1-214ENST00000567547 SH3TC1Q8TE82 1336 aa13.91□□□□□ -0.18
NEIL1-214ENST00000567547 FOXO4P98177 505 aa13.91□□□□□ -0.18
NEIL1-214ENST00000567547 HSP90AB4PQ58FF6 505 aa13.91□□□□□ -0.18
NEIL1-214ENST00000567547 EPHA10Q5JZY3 1008 aa13.91□□□□□ -0.18
NEIL1-214ENST00000567547 CCDC125Q86Z20 511 aa13.91□□□□□ -0.18
NEIL1-214ENST00000567547 FLAD1Q8NFF5 587 aa13.91□□□□□ -0.18
NEIL1-214ENST00000567547 UTP14AQ9BVJ6 771 aaKnown RBP13.91□□□□□ -0.18
NEIL1-214ENST00000567547 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
NEIL1-214ENST00000567547 EP400Q96L91 3159 aa13.91□□□□□ -0.18
NEIL1-214ENST00000567547 DDX60Q8IY21 1712 aaKnown RBP13.9□□□□□ -0.18
NEIL1-214ENST00000567547 RAB11FIP3O75154 756 aa13.9□□□□□ -0.18
NEIL1-214ENST00000567547 PHF14O94880 888 aa13.9□□□□□ -0.18
NEIL1-214ENST00000567547 NTSR2O95665 410 aa13.9□□□□□ -0.18
NEIL1-214ENST00000567547 ZNF827Q17R98 1081 aa13.9□□□□□ -0.18
NEIL1-214ENST00000567547 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
NEIL1-214ENST00000567547 CHD1LQ86WJ1 897 aa13.9□□□□□ -0.18
NEIL1-214ENST00000567547 SRP68Q9UHB9 627 aaKnown RBP13.9□□□□□ -0.18
NEIL1-214ENST00000567547 TRMT112Q9UI30 125 aaKnown RBP13.9□□□□□ -0.18
NEIL1-214ENST00000567547 FAM89AQ96GI7 184 aa13.89□□□□□ -0.19
NEIL1-214ENST00000567547 NYXQ9GZU5 481 aa13.89□□□□□ -0.19
NEIL1-214ENST00000567547 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
NEIL1-214ENST00000567547 CARMIL3Q8ND23 1372 aa13.88□□□□□ -0.19
NEIL1-214ENST00000567547 IRS4O14654 1257 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-214ENST00000567547 PDE8AO60658 829 aa13.88□□□□□ -0.19
NEIL1-214ENST00000567547 CSF1RP07333 972 aa13.88□□□□□ -0.19
NEIL1-214ENST00000567547 RFX5P48382 616 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-214ENST00000567547 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-214ENST00000567547 ANKRD45Q5TZF3 282 aa13.88□□□□□ -0.19
NEIL1-214ENST00000567547 TBC1D9BQ66K14 1250 aa13.88□□□□□ -0.19
NEIL1-214ENST00000567547 LMBR1LQ6UX01 489 aa13.88□□□□□ -0.19
NEIL1-214ENST00000567547 ERC1Q8IUD2 1116 aa13.88□□□□□ -0.19
NEIL1-214ENST00000567547 JARID2Q92833 1246 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-214ENST00000567547 COPRSQ9NQ92 184 aa13.88□□□□□ -0.19
NEIL1-214ENST00000567547 TFCP2L1Q9NZI6 479 aa13.88□□□□□ -0.19
NEIL1-214ENST00000567547 LRP5O75197 1615 aa13.87□□□□□ -0.19
NEIL1-214ENST00000567547 SURF6O75683 361 aaKnown RBP13.87□□□□□ -0.19
NEIL1-214ENST00000567547 GYS1P13807 737 aa13.87□□□□□ -0.19
NEIL1-214ENST00000567547 CTSWP56202 376 aa13.87□□□□□ -0.19
NEIL1-214ENST00000567547 EZH2Q15910 746 aaKnown RBP13.87□□□□□ -0.19
NEIL1-214ENST00000567547 SMIM5Q71RC9 77 aa13.87□□□□□ -0.19
NEIL1-214ENST00000567547 KIF1BPQ96EK5 621 aa13.87□□□□□ -0.19
NEIL1-214ENST00000567547 SETDB2Q96T68 719 aa13.87□□□□□ -0.19
NEIL1-214ENST00000567547 EXOC6BQ9Y2D4 811 aa13.87□□□□□ -0.19
NEIL1-214ENST00000567547 RIC1Q4ADV7 1423 aa13.87□□□□□ -0.19
NEIL1-214ENST00000567547 RTL9Q8NET4 1388 aa13.86□□□□□ -0.19
NEIL1-214ENST00000567547 RTL5Q5HYW3 569 aaPredicted RBP13.86□□□□□ -0.19
NEIL1-214ENST00000567547 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
NEIL1-214ENST00000567547 LNPKQ9C0E8 428 aa13.86□□□□□ -0.19
NEIL1-214ENST00000567547 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
NEIL1-214ENST00000567547 PDE4AP27815 886 aa13.85□□□□□ -0.19
NEIL1-214ENST00000567547 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
NEIL1-214ENST00000567547 SLC10A5Q5PT55 438 aa13.85□□□□□ -0.19
NEIL1-214ENST00000567547 STK32BQ9NY57 414 aa13.85□□□□□ -0.19
NEIL1-214ENST00000567547 PNPLA7Q6ZV29 1317 aa13.85□□□□□ -0.19
NEIL1-214ENST00000567547 RGS3P49796 1198 aa13.84□□□□□ -0.19
NEIL1-214ENST00000567547 G3BP1Q13283 466 aaKnown RBP eCLIP13.84□□□□□ -0.19
NEIL1-214ENST00000567547 NFIXQ14938 502 aa13.84□□□□□ -0.19
NEIL1-214ENST00000567547 SLC15A2Q16348 729 aa13.84□□□□□ -0.19
NEIL1-214ENST00000567547 TPTE2Q6XPS3 522 aa13.84□□□□□ -0.19
NEIL1-214ENST00000567547 NBPF5PQ86XG9 351 aaPredicted RBP13.84□□□□□ -0.19
NEIL1-214ENST00000567547 COL23A1Q86Y22 540 aaPredicted RBP13.84□□□□□ -0.19
NEIL1-214ENST00000567547 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
NEIL1-214ENST00000567547 TTLL11Q8NHH1 800 aa13.84□□□□□ -0.19
NEIL1-214ENST00000567547 RHPN1Q8TCX5 695 aa13.84□□□□□ -0.19
NEIL1-214ENST00000567547 ANO8Q9HCE9 1232 aaPredicted RBP13.84□□□□□ -0.19
NEIL1-214ENST00000567547 PA2G4Q9UQ80 394 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms