RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 GLRX3O76003 335 aaKnown RBP28.35■■■□□ 2.13
LINC00543-201ENST00000567234 CASP7P55210 303 aa28.35■■■□□ 2.13
LINC00543-201ENST00000567234 TTLL7Q6ZT98 887 aa28.35■■■□□ 2.13
LINC00543-201ENST00000567234 GPATCH3Q96I76 525 aa28.35■■■□□ 2.13
LINC00543-201ENST00000567234 QTRT2Q9H974 415 aaKnown RBP28.35■■■□□ 2.13
LINC00543-201ENST00000567234 COPRSQ9NQ92 184 aa28.34■■■□□ 2.13
LINC00543-201ENST00000567234 ASAP1Q9ULH1 1129 aa28.34■■■□□ 2.13
LINC00543-201ENST00000567234 ISY1Q9ULR0 285 aaKnown RBP28.34■■■□□ 2.13
LINC00543-201ENST00000567234 H7C1W4 665 aa28.34■■■□□ 2.13
LINC00543-201ENST00000567234 EPHA10Q5JZY3 1008 aa28.34■■■□□ 2.13
LINC00543-201ENST00000567234 UBE3BQ7Z3V4 1068 aa28.34■■■□□ 2.13
LINC00543-201ENST00000567234 SLKQ9H2G2 1235 aaPredicted RBP28.34■■■□□ 2.13
LINC00543-201ENST00000567234 ATP5J2-PTCD1G3V325 749 aa28.33■■■□□ 2.13
LINC00543-201ENST00000567234 CCDC191Q8NCU4 936 aa28.33■■■□□ 2.13
LINC00543-201ENST00000567234 SASH1O94885 1247 aa28.32■■■□□ 2.12
LINC00543-201ENST00000567234 STARD3NLO95772 234 aa28.32■■■□□ 2.12
LINC00543-201ENST00000567234 CNTROBQ8N137 903 aa28.32■■■□□ 2.12
LINC00543-201ENST00000567234 CWC25Q9NXE8 425 aaPredicted RBP28.32■■■□□ 2.12
LINC00543-201ENST00000567234 TJP1Q07157 1748 aa28.32■■■□□ 2.12
LINC00543-201ENST00000567234 IFIT2P09913 472 aaKnown RBP28.32■■■□□ 2.12
LINC00543-201ENST00000567234 ECHDC1Q9NTX5 307 aa28.32■■■□□ 2.12
LINC00543-201ENST00000567234 SYTL4Q96C24 671 aaPredicted RBP28.31■■■□□ 2.12
LINC00543-201ENST00000567234 ACSBG1Q96GR2 724 aa28.3■■■□□ 2.12
LINC00543-201ENST00000567234 RFX5P48382 616 aaPredicted RBP28.29■■■□□ 2.12
LINC00543-201ENST00000567234 PRIM1P49642 420 aaKnown RBP28.29■■■□□ 2.12
LINC00543-201ENST00000567234 K7ELQ4 463 aaPredicted RBP28.28■■■□□ 2.12
LINC00543-201ENST00000567234 FAM182BQ5T319 152 aa28.28■■■□□ 2.12
LINC00543-201ENST00000567234 DNAJC10Q8IXB1 793 aa28.28■■■□□ 2.12
LINC00543-201ENST00000567234 AACSQ86V21 672 aa28.27■■■□□ 2.12
LINC00543-201ENST00000567234 CHMP5Q9NZZ3 219 aa28.27■■■□□ 2.12
LINC00543-201ENST00000567234 TRIM28Q13263 835 aaKnown RBP28.27■■■□□ 2.12
LINC00543-201ENST00000567234 CLCN1P35523 988 aa28.26■■■□□ 2.11
LINC00543-201ENST00000567234 PTPN12Q05209 780 aaKnown RBP28.26■■■□□ 2.11
LINC00543-201ENST00000567234 RBM42Q9BTD8 480 aaKnown RBP28.26■■■□□ 2.11
LINC00543-201ENST00000567234 ISCA1Q9BUE6 129 aa28.26■■■□□ 2.11
LINC00543-201ENST00000567234 ZBTB3Q9H5J0 574 aa28.26■■■□□ 2.11
LINC00543-201ENST00000567234 FSD2A1L4K1 749 aa28.25■■■□□ 2.11
LINC00543-201ENST00000567234 MCCP23508 829 aa28.25■■■□□ 2.11
LINC00543-201ENST00000567234 ONECUT3O60422 494 aaPredicted RBP28.25■■■□□ 2.11
LINC00543-201ENST00000567234 TCIRG1Q13488 830 aa28.25■■■□□ 2.11
LINC00543-201ENST00000567234 SEPT12Q8IYM1 358 aa28.25■■■□□ 2.11
LINC00543-201ENST00000567234 EAF2Q96CJ1 260 aaPredicted RBP28.25■■■□□ 2.11
LINC00543-201ENST00000567234 ANAPC15P60006 121 aa28.24■■■□□ 2.11
LINC00543-201ENST00000567234 FOXO4P98177 505 aa28.24■■■□□ 2.11
LINC00543-201ENST00000567234 IL17RAQ96F46 866 aa28.24■■■□□ 2.11
LINC00543-201ENST00000567234 KIF6Q6ZMV9 814 aa28.23■■■□□ 2.11
LINC00543-201ENST00000567234 JARID2Q92833 1246 aaPredicted RBP28.23■■■□□ 2.11
LINC00543-201ENST00000567234 SIL1Q9H173 461 aa28.23■■■□□ 2.11
LINC00543-201ENST00000567234 KCNQ2O43526 872 aa28.22■■■□□ 2.11
LINC00543-201ENST00000567234 CD2BP2O95400 341 aaKnown RBP28.22■■■□□ 2.11
LINC00543-201ENST00000567234 DDIT3P35638 169 aa28.22■■■□□ 2.11
LINC00543-201ENST00000567234 CIZ1Q9ULV3 898 aaPredicted RBP28.22■■■□□ 2.11
LINC00543-201ENST00000567234 BRWD3Q6RI45 1802 aa28.22■■■□□ 2.11
LINC00543-201ENST00000567234 CYP19A1P11511 503 aaPredicted RBP28.21■■■□□ 2.11
LINC00543-201ENST00000567234 LMBR1LQ6UX01 489 aa28.21■■■□□ 2.11
LINC00543-201ENST00000567234 KLHDC4Q8TBB5 520 aa28.21■■■□□ 2.11
LINC00543-201ENST00000567234 EVI5LQ96CN4 794 aa28.21■■■□□ 2.11
LINC00543-201ENST00000567234 SGSM2O43147 1006 aa28.2■■■□□ 2.11
LINC00543-201ENST00000567234 ST18O60284 1047 aa28.2■■■□□ 2.11
LINC00543-201ENST00000567234 SPRYD3Q8NCJ5 442 aa28.2■■■□□ 2.11
LINC00543-201ENST00000567234 ANO2Q9NQ90 1003 aa28.2■■■□□ 2.11
LINC00543-201ENST00000567234 RRP9O43818 475 aaKnown RBP28.2■■■□□ 2.1
LINC00543-201ENST00000567234 ZNF772Q68DY9 489 aaPredicted RBP28.2■■■□□ 2.1
LINC00543-201ENST00000567234 MAP3K15Q6ZN16 1313 aa28.19■■■□□ 2.1
LINC00543-201ENST00000567234 MAP4K4O95819 1239 aaPredicted RBP28.19■■■□□ 2.1
LINC00543-201ENST00000567234 SLC4A9Q96Q91 983 aa28.19■■■□□ 2.1
LINC00543-201ENST00000567234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.19■■■□□ 2.1
LINC00543-201ENST00000567234 GOLGA6L3A6NEY3 463 aa28.18■■■□□ 2.1
LINC00543-201ENST00000567234 PTF1AQ7RTS3 328 aa28.18■■■□□ 2.1
LINC00543-201ENST00000567234 RUFY2Q8WXA3 655 aa28.18■■■□□ 2.1
LINC00543-201ENST00000567234 RRAGDQ9NQL2 400 aaPredicted RBP28.18■■■□□ 2.1
LINC00543-201ENST00000567234 ANKRD36CQ5JPF3 1778 aa28.17■■■□□ 2.1
LINC00543-201ENST00000567234 HSP90AB3PQ58FF7 597 aa28.17■■■□□ 2.1
LINC00543-201ENST00000567234 GIGYF2Q6Y7W6 1299 aaKnown RBP28.17■■■□□ 2.1
LINC00543-201ENST00000567234 CCDC8Q9H0W5 538 aaPredicted RBP28.17■■■□□ 2.1
LINC00543-201ENST00000567234 HIP1O00291 1037 aa28.16■■■□□ 2.1
LINC00543-201ENST00000567234 CICQ96RK0 1608 aaPredicted RBP28.16■■■□□ 2.1
LINC00543-201ENST00000567234 TNNI3KQ59H18 835 aa28.15■■■□□ 2.1
LINC00543-201ENST00000567234 RGS17Q9UGC6 210 aaPredicted RBP28.15■■■□□ 2.1
LINC00543-201ENST00000567234 FPGT-TNNI3KV9GXZ4 949 aa28.15■■■□□ 2.1
LINC00543-201ENST00000567234 PCCAP05165 728 aaPredicted RBP28.15■■■□□ 2.1
LINC00543-201ENST00000567234 HSP90AA1P07900 732 aaKnown RBP28.15■■■□□ 2.1
LINC00543-201ENST00000567234 PLA2G12BQ9BX93 195 aa28.15■■■□□ 2.1
LINC00543-201ENST00000567234 SBF2Q86WG5 1849 aa28.14■■■□□ 2.1
LINC00543-201ENST00000567234 DIAPH3Q9NSV4 1193 aa28.14■■■□□ 2.1
LINC00543-201ENST00000567234 RAD50Q92878 1312 aa28.13■■■□□ 2.09
LINC00543-201ENST00000567234 IL6STP40189 918 aaPredicted RBP28.13■■■□□ 2.09
LINC00543-201ENST00000567234 TFCP2Q12800 502 aa28.13■■■□□ 2.09
LINC00543-201ENST00000567234 GPR108Q9NPR9 543 aa28.13■■■□□ 2.09
LINC00543-201ENST00000567234 ZNF330Q9Y3S2 320 aaPredicted RBP28.13■■■□□ 2.09
LINC00543-201ENST00000567234 HSPA4P34932 840 aa28.13■■■□□ 2.09
LINC00543-201ENST00000567234 RBM6P78332 1123 aaKnown RBP28.13■■■□□ 2.09
LINC00543-201ENST00000567234 IL25Q9H293 177 aa28.13■■■□□ 2.09
LINC00543-201ENST00000567234 TLR7Q9NYK1 1049 aaKnown RBP28.13■■■□□ 2.09
LINC00543-201ENST00000567234 NUP98P52948 1817 aa28.12■■■□□ 2.09
LINC00543-201ENST00000567234 MCM2P49736 904 aa28.12■■■□□ 2.09
LINC00543-201ENST00000567234 MRE11P49959 708 aa28.12■■■□□ 2.09
LINC00543-201ENST00000567234 NHSQ6T4R5 1651 aa28.12■■■□□ 2.09
LINC00543-201ENST00000567234 ERVV-1B6SEH8 477 aa28.11■■■□□ 2.09
LINC00543-201ENST00000567234 CIAO1O76071 339 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms