RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 GPRC5DQ9NZD1 345 aa13.37□□□□□ -0.27
CAPN3-216ENST00000567071 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
CAPN3-216ENST00000567071 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
CAPN3-216ENST00000567071 COLQQ9Y215 455 aaPredicted RBP13.36□□□□□ -0.27
CAPN3-216ENST00000567071 FAM155AB1AL88 458 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-216ENST00000567071 GRIPAP1Q4V328 841 aa13.35□□□□□ -0.27
CAPN3-216ENST00000567071 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
CAPN3-216ENST00000567071 SLC39A6Q13433 755 aa13.34□□□□□ -0.27
CAPN3-216ENST00000567071 GBA2Q9HCG7 927 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-216ENST00000567071 PGAP2Q9UHJ9 254 aa13.34□□□□□ -0.27
CAPN3-216ENST00000567071 MKI67P46013 3256 aaKnown RBP13.33□□□□□ -0.27
CAPN3-216ENST00000567071 C1QBPQ07021 282 aaKnown RBP13.33□□□□□ -0.28
CAPN3-216ENST00000567071 INTS3Q68E01 1043 aaKnown RBP13.33□□□□□ -0.28
CAPN3-216ENST00000567071 CSRNP1Q96S65 589 aa13.33□□□□□ -0.28
CAPN3-216ENST00000567071 CDHR2Q9BYE9 1310 aa13.33□□□□□ -0.28
CAPN3-216ENST00000567071 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
CAPN3-216ENST00000567071 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-216ENST00000567071 USP48Q86UV5 1035 aa13.32□□□□□ -0.28
CAPN3-216ENST00000567071 TTC5Q8N0Z6 440 aa13.32□□□□□ -0.28
CAPN3-216ENST00000567071 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-216ENST00000567071 BCL2L13Q9BXK5 485 aa13.32□□□□□ -0.28
CAPN3-216ENST00000567071 POLKQ9UBT6 870 aa13.32□□□□□ -0.28
CAPN3-216ENST00000567071 SZT2Q5T011 3432 aa13.32□□□□□ -0.28
CAPN3-216ENST00000567071 KLRG2A4D1S0 409 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-216ENST00000567071 SLC10A3P09131 477 aa13.31□□□□□ -0.28
CAPN3-216ENST00000567071 IL6STP40189 918 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-216ENST00000567071 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
CAPN3-216ENST00000567071 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
CAPN3-216ENST00000567071 TESK2Q96S53 571 aa13.31□□□□□ -0.28
CAPN3-216ENST00000567071 TEX13AQ9BXU3 409 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-216ENST00000567071 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
CAPN3-216ENST00000567071 PITPNM2Q9BZ72 1349 aa13.31□□□□□ -0.28
CAPN3-216ENST00000567071 GMPSP49915 693 aaPredicted RBP13.3□□□□□ -0.28
CAPN3-216ENST00000567071 TMX4Q9H1E5 349 aaPredicted RBP13.3□□□□□ -0.28
CAPN3-216ENST00000567071 COL4A5P29400 1685 aa13.3□□□□□ -0.28
CAPN3-216ENST00000567071 PPIP5K2O43314 1243 aa13.29□□□□□ -0.28
CAPN3-216ENST00000567071 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
CAPN3-216ENST00000567071 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
CAPN3-216ENST00000567071 NPC1L1Q9UHC9 1359 aa13.29□□□□□ -0.28
CAPN3-216ENST00000567071 H7C1D1 291 aa13.28□□□□□ -0.28
CAPN3-216ENST00000567071 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
CAPN3-216ENST00000567071 KRT26Q7Z3Y9 468 aa13.28□□□□□ -0.28
CAPN3-216ENST00000567071 DZIP3Q86Y13 1208 aaKnown RBP13.28□□□□□ -0.28
CAPN3-216ENST00000567071 CCER1Q8TC90 406 aaPredicted RBP13.28□□□□□ -0.28
CAPN3-216ENST00000567071 MRC1P22897 1456 aa13.28□□□□□ -0.28
CAPN3-216ENST00000567071 POTEFA5A3E0 1075 aa13.27□□□□□ -0.29
CAPN3-216ENST00000567071 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
CAPN3-216ENST00000567071 TNIP1Q15025 636 aa13.27□□□□□ -0.29
CAPN3-216ENST00000567071 CDCA8Q53HL2 280 aa13.27□□□□□ -0.29
CAPN3-216ENST00000567071 NOM1Q5C9Z4 860 aaKnown RBP13.27□□□□□ -0.29
CAPN3-216ENST00000567071 CLEC4GQ6UXB4 293 aa13.27□□□□□ -0.29
CAPN3-216ENST00000567071 ZNRF3Q9ULT6 936 aa13.27□□□□□ -0.29
CAPN3-216ENST00000567071 SNED1Q8TER0 1413 aa13.27□□□□□ -0.29
CAPN3-216ENST00000567071 RBBP6Q7Z6E9 1792 aaKnown RBP13.27□□□□□ -0.29
CAPN3-216ENST00000567071 GPR25O00155 361 aa13.26□□□□□ -0.29
CAPN3-216ENST00000567071 FKTNO75072 461 aa13.26□□□□□ -0.29
CAPN3-216ENST00000567071 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-216ENST00000567071 HIRAP54198 1017 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-216ENST00000567071 CXCL9Q07325 125 aa13.26□□□□□ -0.29
CAPN3-216ENST00000567071 UBR2Q8IWV8 1755 aa13.26□□□□□ -0.29
CAPN3-216ENST00000567071 TRPM4Q8TD43 1214 aa13.26□□□□□ -0.29
CAPN3-216ENST00000567071 SIN3AQ96ST3 1273 aa13.26□□□□□ -0.29
CAPN3-216ENST00000567071 VPS33BQ9H267 617 aa13.26□□□□□ -0.29
CAPN3-216ENST00000567071 PAPPA2Q9BXP8 1791 aa13.25□□□□□ -0.29
CAPN3-216ENST00000567071 RNMTO43148 476 aaKnown RBP13.25□□□□□ -0.29
CAPN3-216ENST00000567071 AOC3Q16853 763 aa13.25□□□□□ -0.29
CAPN3-216ENST00000567071 RPGRQ92834 1020 aaKnown RBP13.25□□□□□ -0.29
CAPN3-216ENST00000567071 DCPSQ96C86 337 aaKnown RBP13.25□□□□□ -0.29
CAPN3-216ENST00000567071 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
CAPN3-216ENST00000567071 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
CAPN3-216ENST00000567071 FAM177BA6PVY3 158 aa13.24□□□□□ -0.29
CAPN3-216ENST00000567071 AEBP1Q8IUX7 1158 aa13.24□□□□□ -0.29
CAPN3-216ENST00000567071 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
CAPN3-216ENST00000567071 CNOT7Q9UIV1 285 aaKnown RBP13.24□□□□□ -0.29
CAPN3-216ENST00000567071 NIP7Q9Y221 180 aaKnown RBP eCLIP13.24□□□□□ -0.29
CAPN3-216ENST00000567071 COL6A3P12111 3177 aa13.24□□□□□ -0.29
CAPN3-216ENST00000567071 POLR2AP24928 1970 aaKnown RBP13.23□□□□□ -0.29
CAPN3-216ENST00000567071 SULT6B1Q6IMI4 303 aa13.23□□□□□ -0.29
CAPN3-216ENST00000567071 RASAL3Q86YV0 1011 aa13.23□□□□□ -0.29
CAPN3-216ENST00000567071 HEG1Q9ULI3 1381 aa13.22□□□□□ -0.29
CAPN3-216ENST00000567071 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
CAPN3-216ENST00000567071 TMEM106CQ9BVX2 250 aa13.22□□□□□ -0.29
CAPN3-216ENST00000567071 CARD14Q9BXL6 1004 aa13.22□□□□□ -0.29
CAPN3-216ENST00000567071 H0YGN5 161 aa13.21□□□□□ -0.29
CAPN3-216ENST00000567071 PPEF1O14829 653 aaPredicted RBP13.21□□□□□ -0.29
CAPN3-216ENST00000567071 A1BGP04217 495 aa13.21□□□□□ -0.29
CAPN3-216ENST00000567071 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
CAPN3-216ENST00000567071 MICALL2Q8IY33 904 aa13.21□□□□□ -0.29
CAPN3-216ENST00000567071 OTUD5Q96G74 571 aa13.21□□□□□ -0.29
CAPN3-216ENST00000567071 ADM5C9JUS6 153 aa13.2□□□□□ -0.3
CAPN3-216ENST00000567071 TCERG1O14776 1098 aaKnown RBP13.2□□□□□ -0.3
CAPN3-216ENST00000567071 RAD17O75943 681 aa13.2□□□□□ -0.3
CAPN3-216ENST00000567071 EN2P19622 333 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-216ENST00000567071 CRY2Q49AN0 593 aa13.2□□□□□ -0.3
CAPN3-216ENST00000567071 DLK2Q6UY11 383 aa13.2□□□□□ -0.3
CAPN3-216ENST00000567071 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
CAPN3-216ENST00000567071 ZNF496Q96IT1 587 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-216ENST00000567071 NYXQ9GZU5 481 aa13.2□□□□□ -0.3
CAPN3-216ENST00000567071 TRIM17Q9Y577 477 aa13.2□□□□□ -0.3
CAPN3-216ENST00000567071 FKBP1BP68106 108 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms