RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
HMGN2P40-201ENST00000566875 DUSP27Q5VZP5 1158 aa13.16□□□□□ -0.3
HMGN2P40-201ENST00000566875 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
HMGN2P40-201ENST00000566875 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
HMGN2P40-201ENST00000566875 NTSR2O95665 410 aa13.15□□□□□ -0.3
HMGN2P40-201ENST00000566875 SYNE4Q8N205 404 aa13.15□□□□□ -0.3
HMGN2P40-201ENST00000566875 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
HMGN2P40-201ENST00000566875 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
HMGN2P40-201ENST00000566875 UBN2Q6ZU65 1347 aa13.14□□□□□ -0.31
HMGN2P40-201ENST00000566875 BBOX1O75936 387 aa13.14□□□□□ -0.31
HMGN2P40-201ENST00000566875 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
HMGN2P40-201ENST00000566875 NLRP10Q86W26 655 aa13.14□□□□□ -0.31
HMGN2P40-201ENST00000566875 SMC1BQ8NDV3 1235 aa13.14□□□□□ -0.31
HMGN2P40-201ENST00000566875 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
HMGN2P40-201ENST00000566875 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
HMGN2P40-201ENST00000566875 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
HMGN2P40-201ENST00000566875 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
HMGN2P40-201ENST00000566875 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
HMGN2P40-201ENST00000566875 SCN7AQ01118 1682 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 POTECB2RU33 542 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 CCDC27Q2M243 656 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 CCDC184Q52MB2 194 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 PSMD1Q99460 953 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 SBF1O95248 1867 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
HMGN2P40-201ENST00000566875 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
HMGN2P40-201ENST00000566875 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
HMGN2P40-201ENST00000566875 MRS2Q9HD23 443 aa13.11□□□□□ -0.31
HMGN2P40-201ENST00000566875 ANKRD31Q8N7Z5 1873 aa13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 HSP90B1P14625 803 aaKnown RBP13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 CCDC30Q5VVM6 783 aa13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 DDX46Q7L014 1031 aaKnown RBP13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 VPS33BQ9H267 617 aa13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
HMGN2P40-201ENST00000566875 ABCC12Q96J65 1359 aa13.09□□□□□ -0.31
HMGN2P40-201ENST00000566875 FZD9O00144 591 aa13.09□□□□□ -0.31
HMGN2P40-201ENST00000566875 PPEF1O14829 653 aaPredicted RBP13.09□□□□□ -0.31
HMGN2P40-201ENST00000566875 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
HMGN2P40-201ENST00000566875 C3orf67Q6ZVT6 689 aa13.09□□□□□ -0.31
HMGN2P40-201ENST00000566875 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
HMGN2P40-201ENST00000566875 SP8Q8IXZ3 490 aa13.09□□□□□ -0.31
HMGN2P40-201ENST00000566875 RIC1Q4ADV7 1423 aa13.08□□□□□ -0.32
HMGN2P40-201ENST00000566875 BCORQ6W2J9 1755 aa13.08□□□□□ -0.32
HMGN2P40-201ENST00000566875 ATP5J2-PTCD1G3V325 749 aa13.08□□□□□ -0.32
HMGN2P40-201ENST00000566875 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
HMGN2P40-201ENST00000566875 EIF6P56537 245 aaKnown RBP13.08□□□□□ -0.32
HMGN2P40-201ENST00000566875 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
HMGN2P40-201ENST00000566875 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
HMGN2P40-201ENST00000566875 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
HMGN2P40-201ENST00000566875 NUP98P52948 1817 aa13.07□□□□□ -0.32
HMGN2P40-201ENST00000566875 TMC4Q7Z404 712 aa13.07□□□□□ -0.32
HMGN2P40-201ENST00000566875 GPC2Q8N158 579 aa13.07□□□□□ -0.32
HMGN2P40-201ENST00000566875 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
HMGN2P40-201ENST00000566875 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
HMGN2P40-201ENST00000566875 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
HMGN2P40-201ENST00000566875 GRAPQ13588 217 aa13.06□□□□□ -0.32
HMGN2P40-201ENST00000566875 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
HMGN2P40-201ENST00000566875 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
HMGN2P40-201ENST00000566875 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
HMGN2P40-201ENST00000566875 MPNDQ8N594 471 aa13.06□□□□□ -0.32
HMGN2P40-201ENST00000566875 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
HMGN2P40-201ENST00000566875 HACL1Q9UJ83 578 aa13.06□□□□□ -0.32
HMGN2P40-201ENST00000566875 IL16Q14005 1332 aa13.06□□□□□ -0.32
HMGN2P40-201ENST00000566875 LAMB4A4D0S4 1761 aa13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 IRS4O14654 1257 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 DPP8Q6V1X1 898 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 PNMA8AQ86V59 439 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 ZBTB38Q8NAP3 1195 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 CCDC191Q8NCU4 936 aa13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 RTFDC1Q9BY42 306 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 TAF1DQ9H5J8 278 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 ABCC4O15439 1325 aa13.05□□□□□ -0.32
HMGN2P40-201ENST00000566875 FER1L6Q2WGJ9 1857 aa13.04□□□□□ -0.32
HMGN2P40-201ENST00000566875 LDHDQ86WU2 507 aa13.04□□□□□ -0.32
HMGN2P40-201ENST00000566875 NIM1KQ8IY84 436 aa13.04□□□□□ -0.32
HMGN2P40-201ENST00000566875 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
HMGN2P40-201ENST00000566875 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
HMGN2P40-201ENST00000566875 GJA3Q9Y6H8 435 aa13.04□□□□□ -0.32
HMGN2P40-201ENST00000566875 CCDC88AQ3V6T2 1871 aa13.04□□□□□ -0.32
HMGN2P40-201ENST00000566875 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
HMGN2P40-201ENST00000566875 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
HMGN2P40-201ENST00000566875 EPHX2P34913 555 aa13.03□□□□□ -0.32
HMGN2P40-201ENST00000566875 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
HMGN2P40-201ENST00000566875 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
HMGN2P40-201ENST00000566875 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms