RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 RPGRQ92834 1020 aaKnown RBP24.36■■□□□ 1.49
IFT140-208ENST00000566818 DBF4Q9UBU7 674 aaPredicted RBP24.36■■□□□ 1.49
IFT140-208ENST00000566818 DICER1Q9UPY3 1922 aaKnown RBP24.35■■□□□ 1.49
IFT140-208ENST00000566818 UTP14AQ9BVJ6 771 aaKnown RBP24.35■■□□□ 1.49
IFT140-208ENST00000566818 MRS2Q9HD23 443 aa24.35■■□□□ 1.49
IFT140-208ENST00000566818 GLTPD2A6NH11 291 aa24.34■■□□□ 1.49
IFT140-208ENST00000566818 HSPA6P17066 643 aa24.34■■□□□ 1.49
IFT140-208ENST00000566818 CCDC184Q52MB2 194 aa24.34■■□□□ 1.49
IFT140-208ENST00000566818 C7orf43Q8WVR3 580 aa24.34■■□□□ 1.49
IFT140-208ENST00000566818 HYPKQ9NX55 129 aa24.33■■□□□ 1.49
IFT140-208ENST00000566818 RTKN2Q8IZC4 609 aa24.32■■□□□ 1.48
IFT140-208ENST00000566818 RBM46Q8TBY0 533 aaKnown RBP24.32■■□□□ 1.48
IFT140-208ENST00000566818 RRAGCQ9HB90 399 aa24.32■■□□□ 1.48
IFT140-208ENST00000566818 HOXA10P31260 410 aaPredicted RBP24.31■■□□□ 1.48
IFT140-208ENST00000566818 FKBP4Q02790 459 aaKnown RBP eCLIP24.31■■□□□ 1.48
IFT140-208ENST00000566818 DPY19L2Q6NUT2 758 aa24.31■■□□□ 1.48
IFT140-208ENST00000566818 RBM17Q96I25 401 aaKnown RBP24.31■■□□□ 1.48
IFT140-208ENST00000566818 CHMP4AQ9BY43 222 aa24.31■■□□□ 1.48
IFT140-208ENST00000566818 TCIRG1Q13488 830 aa24.3■■□□□ 1.48
IFT140-208ENST00000566818 PLBD2Q8NHP8 589 aa24.3■■□□□ 1.48
IFT140-208ENST00000566818 NLRP3Q96P20 1036 aa24.3■■□□□ 1.48
IFT140-208ENST00000566818 CCDC27Q2M243 656 aa24.29■■□□□ 1.48
IFT140-208ENST00000566818 CC2D2BQ6DHV5 1058 aa24.29■■□□□ 1.48
IFT140-208ENST00000566818 NLRP10Q86W26 655 aa24.29■■□□□ 1.48
IFT140-208ENST00000566818 CRAMP1Q96RY5 1269 aa24.28■■□□□ 1.48
IFT140-208ENST00000566818 WDR90Q96KV7 1748 aa24.27■■□□□ 1.48
IFT140-208ENST00000566818 VEGFAP15692 232 aaPredicted RBP24.27■■□□□ 1.48
IFT140-208ENST00000566818 SLC10A5Q5PT55 438 aa24.27■■□□□ 1.48
IFT140-208ENST00000566818 ANKRD13DQ6ZTN6 518 aa24.27■■□□□ 1.48
IFT140-208ENST00000566818 TRMT112Q9UI30 125 aaKnown RBP24.27■■□□□ 1.48
IFT140-208ENST00000566818 GOLGA2Q08379 1002 aa24.26■■□□□ 1.47
IFT140-208ENST00000566818 FSTL1Q12841 308 aa24.26■■□□□ 1.47
IFT140-208ENST00000566818 GRIPAP1Q4V328 841 aa24.26■■□□□ 1.47
IFT140-208ENST00000566818 SH3TC1Q8TE82 1336 aa24.26■■□□□ 1.47
IFT140-208ENST00000566818 ELL2O00472 640 aaPredicted RBP24.25■■□□□ 1.47
IFT140-208ENST00000566818 PPEF1O14829 653 aaPredicted RBP24.25■■□□□ 1.47
IFT140-208ENST00000566818 NCBP3Q53F19 620 aaKnown RBP24.25■■□□□ 1.47
IFT140-208ENST00000566818 OLFM4Q6UX06 510 aa24.25■■□□□ 1.47
IFT140-208ENST00000566818 TMX4Q9H1E5 349 aaPredicted RBP24.25■■□□□ 1.47
IFT140-208ENST00000566818 ZNF277Q9NRM2 450 aaPredicted RBP24.25■■□□□ 1.47
IFT140-208ENST00000566818 C3orf67Q6ZVT6 689 aa24.24■■□□□ 1.47
IFT140-208ENST00000566818 PSMD1Q99460 953 aa24.24■■□□□ 1.47
IFT140-208ENST00000566818 APLP1P51693 650 aa24.23■■□□□ 1.47
IFT140-208ENST00000566818 CCDC30Q5VVM6 783 aa24.23■■□□□ 1.47
IFT140-208ENST00000566818 WWC1Q8IX03 1113 aa24.23■■□□□ 1.47
IFT140-208ENST00000566818 SMC1BQ8NDV3 1235 aa24.23■■□□□ 1.47
IFT140-208ENST00000566818 SNED1Q8TER0 1413 aa24.23■■□□□ 1.47
IFT140-208ENST00000566818 LAMB2P55268 1798 aa24.22■■□□□ 1.47
IFT140-208ENST00000566818 IL16Q14005 1332 aa24.22■■□□□ 1.47
IFT140-208ENST00000566818 IARSP41252 1262 aaKnown RBP24.22■■□□□ 1.47
IFT140-208ENST00000566818 SYNE4Q8N205 404 aa24.22■■□□□ 1.47
IFT140-208ENST00000566818 C8orf58Q8NAV2 365 aa24.22■■□□□ 1.47
IFT140-208ENST00000566818 HCLS1P14317 486 aaPredicted RBP24.21■■□□□ 1.47
IFT140-208ENST00000566818 RIC3Q7Z5B4 369 aa24.21■■□□□ 1.47
IFT140-208ENST00000566818 ISCA1Q9BUE6 129 aa24.21■■□□□ 1.47
IFT140-208ENST00000566818 ABCC4O15439 1325 aa24.2■■□□□ 1.46
IFT140-208ENST00000566818 TSR2Q969E8 191 aaKnown RBP24.2■■□□□ 1.46
IFT140-208ENST00000566818 DDX58O95786 925 aaKnown RBP24.19■■□□□ 1.46
IFT140-208ENST00000566818 DDX46Q7L014 1031 aaKnown RBP24.19■■□□□ 1.46
IFT140-208ENST00000566818 ATP5J2-PTCD1G3V325 749 aa24.18■■□□□ 1.46
IFT140-208ENST00000566818 TCERG1O14776 1098 aaKnown RBP24.18■■□□□ 1.46
IFT140-208ENST00000566818 JDP2Q8WYK2 163 aa24.18■■□□□ 1.46
IFT140-208ENST00000566818 STK31Q9BXU1 1019 aa24.18■■□□□ 1.46
IFT140-208ENST00000566818 PHAXQ9H814 394 aaKnown RBP24.18■■□□□ 1.46
IFT140-208ENST00000566818 CEP350Q5VT06 3117 aa24.18■■□□□ 1.46
IFT140-208ENST00000566818 IQCA1LA6NCM1 817 aa24.17■■□□□ 1.46
IFT140-208ENST00000566818 DDNO94850 711 aaPredicted RBP24.17■■□□□ 1.46
IFT140-208ENST00000566818 TRIM28Q13263 835 aaKnown RBP24.17■■□□□ 1.46
IFT140-208ENST00000566818 ATP6V0A2Q9Y487 856 aa24.17■■□□□ 1.46
IFT140-208ENST00000566818 DDX60Q8IY21 1712 aaKnown RBP24.17■■□□□ 1.46
IFT140-208ENST00000566818 BBOX1O75936 387 aa24.16■■□□□ 1.46
IFT140-208ENST00000566818 ZNF541Q9H0D2 1346 aa24.15■■□□□ 1.46
IFT140-208ENST00000566818 POTECB2RU33 542 aa24.15■■□□□ 1.46
IFT140-208ENST00000566818 HSP90B1P14625 803 aaKnown RBP24.15■■□□□ 1.46
IFT140-208ENST00000566818 GRAPQ13588 217 aa24.15■■□□□ 1.46
IFT140-208ENST00000566818 TWISTNBQ3B726 338 aaPredicted RBP24.15■■□□□ 1.46
IFT140-208ENST00000566818 TSPYL6Q8N831 410 aa24.15■■□□□ 1.46
IFT140-208ENST00000566818 GRAPLQ8TC17 118 aaPredicted RBP24.15■■□□□ 1.46
IFT140-208ENST00000566818 FAM89AQ96GI7 184 aa24.15■■□□□ 1.46
IFT140-208ENST00000566818 L3MBTL3Q96JM7 780 aaPredicted RBP24.15■■□□□ 1.46
IFT140-208ENST00000566818 TMC4Q7Z404 712 aa24.14■■□□□ 1.45
IFT140-208ENST00000566818 MYD88Q99836 296 aa24.14■■□□□ 1.45
IFT140-208ENST00000566818 SCN4AP35499 1836 aa24.14■■□□□ 1.45
IFT140-208ENST00000566818 FZD9O00144 591 aa24.13■■□□□ 1.45
IFT140-208ENST00000566818 WDR63Q8IWG1 891 aa24.13■■□□□ 1.45
IFT140-208ENST00000566818 LARGE2Q8N3Y3 721 aa24.13■■□□□ 1.45
IFT140-208ENST00000566818 SUPT20HQ8NEM7 779 aa24.13■■□□□ 1.45
IFT140-208ENST00000566818 ZNF428Q96B54 188 aa24.13■■□□□ 1.45
IFT140-208ENST00000566818 EIF6P56537 245 aaKnown RBP24.12■■□□□ 1.45
IFT140-208ENST00000566818 SP8Q8IXZ3 490 aa24.12■■□□□ 1.45
IFT140-208ENST00000566818 FAM9BQ8IZU0 186 aa24.12■■□□□ 1.45
IFT140-208ENST00000566818 SALL2Q9Y467 1007 aaPredicted RBP24.12■■□□□ 1.45
IFT140-208ENST00000566818 FANCIQ9NVI1 1328 aa24.11■■□□□ 1.45
IFT140-208ENST00000566818 IRS4O14654 1257 aaPredicted RBP24.11■■□□□ 1.45
IFT140-208ENST00000566818 DPP8Q6V1X1 898 aaPredicted RBP24.11■■□□□ 1.45
IFT140-208ENST00000566818 NIM1KQ8IY84 436 aa24.11■■□□□ 1.45
IFT140-208ENST00000566818 ZBTB38Q8NAP3 1195 aaPredicted RBP24.11■■□□□ 1.45
IFT140-208ENST00000566818 CCDC191Q8NCU4 936 aa24.11■■□□□ 1.45
IFT140-208ENST00000566818 VPS33BQ9H267 617 aa24.11■■□□□ 1.45
IFT140-208ENST00000566818 PPIP5K2O43314 1243 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms