RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 NFIXQ14938 502 aa9.39□□□□□ -0.91
SIN3A-207ENST00000566640 DALRD3Q5D0E6 543 aaKnown RBP9.39□□□□□ -0.91
SIN3A-207ENST00000566640 C9orf131Q5VYM1 1079 aa9.39□□□□□ -0.91
SIN3A-207ENST00000566640 NMRK2Q9NPI5 230 aa9.39□□□□□ -0.91
SIN3A-207ENST00000566640 NARFQ9UHQ1 456 aa9.39□□□□□ -0.91
SIN3A-207ENST00000566640 RIMBP2O15034 1052 aa9.38□□□□□ -0.91
SIN3A-207ENST00000566640 ZPR1O75312 459 aa9.38□□□□□ -0.91
SIN3A-207ENST00000566640 PDIA6Q15084 440 aa9.38□□□□□ -0.91
SIN3A-207ENST00000566640 N4BP2Q86UW6 1770 aaPredicted RBP9.37□□□□□ -0.91
SIN3A-207ENST00000566640 TBC1D12O60347 775 aa9.37□□□□□ -0.91
SIN3A-207ENST00000566640 EIF5P55010 431 aaKnown RBP9.37□□□□□ -0.91
SIN3A-207ENST00000566640 IFFO2Q5TF58 517 aa9.37□□□□□ -0.91
SIN3A-207ENST00000566640 IL17REQ8NFR9 667 aa9.37□□□□□ -0.91
SIN3A-207ENST00000566640 CEMIPQ8WUJ3 1361 aa9.37□□□□□ -0.91
SIN3A-207ENST00000566640 BRCA1P38398 1863 aaKnown RBP9.36□□□□□ -0.91
SIN3A-207ENST00000566640 SERPINB2P05120 415 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 APLP1P51693 650 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 DDX10Q13206 875 aaKnown RBP9.36□□□□□ -0.91
SIN3A-207ENST00000566640 ZNF790Q6PG37 636 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.36□□□□□ -0.91
SIN3A-207ENST00000566640 ZNF710Q8N1W2 664 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 DNAJC5GQ8N7S2 189 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 ZNF496Q96IT1 587 aaPredicted RBP9.36□□□□□ -0.91
SIN3A-207ENST00000566640 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 RNF181Q9P0P0 153 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 CARMIL3Q8ND23 1372 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 HEG1Q9ULI3 1381 aa9.36□□□□□ -0.91
SIN3A-207ENST00000566640 ZNF316A6NFI3 1004 aaPredicted RBP9.35□□□□□ -0.91
SIN3A-207ENST00000566640 SPDYE16A6NNV3 312 aaPredicted RBP9.35□□□□□ -0.91
SIN3A-207ENST00000566640 GNAT3A8MTJ3 354 aa9.35□□□□□ -0.91
SIN3A-207ENST00000566640 STARD3NLO95772 234 aa9.35□□□□□ -0.91
SIN3A-207ENST00000566640 HOXB1P14653 301 aaPredicted RBP9.35□□□□□ -0.91
SIN3A-207ENST00000566640 MLLT3P42568 568 aaPredicted RBP9.35□□□□□ -0.91
SIN3A-207ENST00000566640 PRELPP51888 382 aa9.35□□□□□ -0.91
SIN3A-207ENST00000566640 GAS2L2Q8NHY3 880 aa9.35□□□□□ -0.91
SIN3A-207ENST00000566640 RBM46Q8TBY0 533 aaKnown RBP9.35□□□□□ -0.91
SIN3A-207ENST00000566640 NRXN2Q9P2S2 1712 aa9.35□□□□□ -0.91
SIN3A-207ENST00000566640 ZC3H4Q9UPT8 1303 aaKnown RBP9.34□□□□□ -0.91
SIN3A-207ENST00000566640 CANXP27824 592 aaKnown RBP9.34□□□□□ -0.91
SIN3A-207ENST00000566640 RASSF7Q02833 373 aa9.34□□□□□ -0.91
SIN3A-207ENST00000566640 TTC5Q8N0Z6 440 aa9.34□□□□□ -0.91
SIN3A-207ENST00000566640 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
SIN3A-207ENST00000566640 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
SIN3A-207ENST00000566640 UBR2Q8IWV8 1755 aa9.34□□□□□ -0.91
SIN3A-207ENST00000566640 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 A0A087WZG4 1122 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 EVI5O60447 810 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 IL6STP40189 918 aaPredicted RBP9.33□□□□□ -0.92
SIN3A-207ENST00000566640 TEFQ10587 303 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 FSTL1Q12841 308 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 TBC1D9BQ66K14 1250 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 TTLL6Q8N841 843 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 PHACTR3Q96KR7 559 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 TEX13AQ9BXU3 409 aaPredicted RBP9.33□□□□□ -0.92
SIN3A-207ENST00000566640 ARFGEF1Q9Y6D6 1849 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 DLG5Q8TDM6 1919 aa9.33□□□□□ -0.92
SIN3A-207ENST00000566640 SIPA1L3O60292 1781 aaPredicted RBP9.32□□□□□ -0.92
SIN3A-207ENST00000566640 NFKBIEO00221 500 aa9.32□□□□□ -0.92
SIN3A-207ENST00000566640 KCNQ3O43525 872 aa9.32□□□□□ -0.92
SIN3A-207ENST00000566640 CAMTA2O94983 1202 aa9.32□□□□□ -0.92
SIN3A-207ENST00000566640 U2AF1L5P0DN76 240 aaPredicted RBP9.32□□□□□ -0.92
SIN3A-207ENST00000566640 LMNB1P20700 586 aa9.32□□□□□ -0.92
SIN3A-207ENST00000566640 PRKAR2BP31323 418 aa9.32□□□□□ -0.92
SIN3A-207ENST00000566640 ZEB1P37275 1124 aaPredicted RBP9.32□□□□□ -0.92
SIN3A-207ENST00000566640 U2AF1Q01081 240 aaKnown RBP eCLIP9.32□□□□□ -0.92
SIN3A-207ENST00000566640 BICDL1Q6ZP65 573 aa9.32□□□□□ -0.92
SIN3A-207ENST00000566640 C2CD5Q86YS7 1000 aa9.32□□□□□ -0.92
SIN3A-207ENST00000566640 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
SIN3A-207ENST00000566640 PRR5LQ6MZQ0 368 aa9.31□□□□□ -0.92
SIN3A-207ENST00000566640 FMNL2Q96PY5 1086 aa9.31□□□□□ -0.92
SIN3A-207ENST00000566640 BRIP1Q9BX63 1249 aa9.31□□□□□ -0.92
SIN3A-207ENST00000566640 RRAGCQ9HB90 399 aa9.31□□□□□ -0.92
SIN3A-207ENST00000566640 TBC1D2BQ9UPU7 963 aa9.31□□□□□ -0.92
SIN3A-207ENST00000566640 SCN7AQ01118 1682 aa9.3□□□□□ -0.92
SIN3A-207ENST00000566640 GLTPD2A6NH11 291 aa9.3□□□□□ -0.92
SIN3A-207ENST00000566640 H0YIN7 160 aa9.3□□□□□ -0.92
SIN3A-207ENST00000566640 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
SIN3A-207ENST00000566640 A1BGP04217 495 aa9.3□□□□□ -0.92
SIN3A-207ENST00000566640 HTRA3P83110 453 aa9.3□□□□□ -0.92
SIN3A-207ENST00000566640 GPR153Q6NV75 609 aa9.3□□□□□ -0.92
SIN3A-207ENST00000566640 C16orf71Q8IYS4 520 aaPredicted RBP9.3□□□□□ -0.92
SIN3A-207ENST00000566640 KHSRPQ92945 711 aaKnown RBP eCLIP9.3□□□□□ -0.92
SIN3A-207ENST00000566640 PDZRN3Q9UPQ7 1066 aa9.3□□□□□ -0.92
SIN3A-207ENST00000566640 NUDCQ9Y266 331 aa9.3□□□□□ -0.92
SIN3A-207ENST00000566640 GTF3C3Q9Y5Q9 886 aa9.3□□□□□ -0.92
SIN3A-207ENST00000566640 PRAMEF22A3QJZ6 481 aa9.29□□□□□ -0.92
SIN3A-207ENST00000566640 BTBD11A6QL63 1104 aa9.29□□□□□ -0.92
SIN3A-207ENST00000566640 NUDT7P0C024 238 aa9.29□□□□□ -0.92
SIN3A-207ENST00000566640 PDE6BP35913 854 aa9.29□□□□□ -0.92
SIN3A-207ENST00000566640 JMYQ8N9B5 988 aa9.29□□□□□ -0.92
SIN3A-207ENST00000566640 KLRG1Q96E93 195 aa9.29□□□□□ -0.92
SIN3A-207ENST00000566640 USP16Q9Y5T5 823 aa9.29□□□□□ -0.92
SIN3A-207ENST00000566640 LTBP3Q9NS15 1303 aa9.29□□□□□ -0.92
SIN3A-207ENST00000566640 DLEC1Q9Y238 1755 aa9.28□□□□□ -0.92
SIN3A-207ENST00000566640 POTECB2RU33 542 aa9.28□□□□□ -0.92
SIN3A-207ENST00000566640 SRGNP10124 158 aa9.28□□□□□ -0.92
SIN3A-207ENST00000566640 DZIP3Q86Y13 1208 aaKnown RBP9.28□□□□□ -0.92
SIN3A-207ENST00000566640 CCDC24Q8N4L8 307 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms