RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 IL6STP40189 918 aaPredicted RBP13.98□□□□□ -0.17
LINC00562-201ENST00000566385 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
LINC00562-201ENST00000566385 PTPN12Q05209 780 aaKnown RBP13.98□□□□□ -0.17
LINC00562-201ENST00000566385 DZIP3Q86Y13 1208 aaKnown RBP13.98□□□□□ -0.17
LINC00562-201ENST00000566385 TUBGCP6Q96RT7 1819 aa13.98□□□□□ -0.17
LINC00562-201ENST00000566385 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
LINC00562-201ENST00000566385 STAP2Q9UGK3 403 aa13.98□□□□□ -0.17
LINC00562-201ENST00000566385 NUP98P52948 1817 aa13.97□□□□□ -0.17
LINC00562-201ENST00000566385 HSP90AB4PQ58FF6 505 aa13.97□□□□□ -0.17
LINC00562-201ENST00000566385 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
LINC00562-201ENST00000566385 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
LINC00562-201ENST00000566385 ATRNO75882 1429 aa13.97□□□□□ -0.17
LINC00562-201ENST00000566385 CDC45O75419 566 aa13.97□□□□□ -0.17
LINC00562-201ENST00000566385 MAP4K4O95819 1239 aaPredicted RBP13.97□□□□□ -0.17
LINC00562-201ENST00000566385 SEPT12Q8IYM1 358 aa13.97□□□□□ -0.17
LINC00562-201ENST00000566385 C22orf23Q9BZE7 217 aa13.97□□□□□ -0.17
LINC00562-201ENST00000566385 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
LINC00562-201ENST00000566385 COL15A1P39059 1388 aa13.96□□□□□ -0.17
LINC00562-201ENST00000566385 ONECUT3O60422 494 aaPredicted RBP13.96□□□□□ -0.17
LINC00562-201ENST00000566385 G3BP1Q13283 466 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC00562-201ENST00000566385 PI4K2BQ8TCG2 481 aa13.96□□□□□ -0.17
LINC00562-201ENST00000566385 TRPC5Q9UL62 973 aaPredicted RBP13.96□□□□□ -0.17
LINC00562-201ENST00000566385 TRIM28Q13263 835 aaKnown RBP13.96□□□□□ -0.18
LINC00562-201ENST00000566385 LINC00116Q8NCU8 138 aa13.96□□□□□ -0.18
LINC00562-201ENST00000566385 EAF2Q96CJ1 260 aaPredicted RBP13.96□□□□□ -0.18
LINC00562-201ENST00000566385 CCDC85AQ96PX6 553 aaPredicted RBP13.96□□□□□ -0.18
LINC00562-201ENST00000566385 BTAF1O14981 1849 aa13.95□□□□□ -0.18
LINC00562-201ENST00000566385 NLRP10Q86W26 655 aa13.95□□□□□ -0.18
LINC00562-201ENST00000566385 CLASRPQ8N2M8 674 aaKnown RBP13.95□□□□□ -0.18
LINC00562-201ENST00000566385 SMARCC1Q92922 1105 aaPredicted RBP13.95□□□□□ -0.18
LINC00562-201ENST00000566385 COPRSQ9NQ92 184 aa13.95□□□□□ -0.18
LINC00562-201ENST00000566385 TLR7Q9NYK1 1049 aaKnown RBP13.95□□□□□ -0.18
LINC00562-201ENST00000566385 UBN2Q6ZU65 1347 aa13.95□□□□□ -0.18
LINC00562-201ENST00000566385 RILPL2Q969X0 211 aa13.95□□□□□ -0.18
LINC00562-201ENST00000566385 ZNF594Q96JF6 807 aaPredicted RBP13.95□□□□□ -0.18
LINC00562-201ENST00000566385 CCDC8Q9H0W5 538 aaPredicted RBP13.95□□□□□ -0.18
LINC00562-201ENST00000566385 TRIM6-TRIM34B2RNG4 842 aa13.94□□□□□ -0.18
LINC00562-201ENST00000566385 COL5A3P25940 1745 aaPredicted RBP13.94□□□□□ -0.18
LINC00562-201ENST00000566385 AACSQ86V21 672 aa13.93□□□□□ -0.18
LINC00562-201ENST00000566385 PCCAP05165 728 aaPredicted RBP13.93□□□□□ -0.18
LINC00562-201ENST00000566385 ERC1Q8IUD2 1116 aa13.93□□□□□ -0.18
LINC00562-201ENST00000566385 ZBTB38Q8NAP3 1195 aaPredicted RBP13.93□□□□□ -0.18
LINC00562-201ENST00000566385 ANKRD36CQ5JPF3 1778 aa13.93□□□□□ -0.18
LINC00562-201ENST00000566385 SBF2Q86WG5 1849 aa13.93□□□□□ -0.18
LINC00562-201ENST00000566385 ERVV-1B6SEH8 477 aa13.92□□□□□ -0.18
LINC00562-201ENST00000566385 TFCP2Q12800 502 aa13.92□□□□□ -0.18
LINC00562-201ENST00000566385 RREB1Q92766 1687 aa13.92□□□□□ -0.18
LINC00562-201ENST00000566385 CICQ96RK0 1608 aaPredicted RBP13.92□□□□□ -0.18
LINC00562-201ENST00000566385 FAM177BA6PVY3 158 aa13.92□□□□□ -0.18
LINC00562-201ENST00000566385 CAMTA2O94983 1202 aa13.92□□□□□ -0.18
LINC00562-201ENST00000566385 NHSQ6T4R5 1651 aa13.92□□□□□ -0.18
LINC00562-201ENST00000566385 IFIT2P09913 472 aaKnown RBP13.91□□□□□ -0.18
LINC00562-201ENST00000566385 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
LINC00562-201ENST00000566385 AMIGO3Q86WK7 504 aa13.91□□□□□ -0.18
LINC00562-201ENST00000566385 ZNF34Q8IZ26 560 aa13.91□□□□□ -0.18
LINC00562-201ENST00000566385 DDRGK1Q96HY6 314 aa13.91□□□□□ -0.18
LINC00562-201ENST00000566385 PUS3Q9BZE2 481 aaKnown RBP13.91□□□□□ -0.18
LINC00562-201ENST00000566385 ATG9AQ7Z3C6 839 aa13.91□□□□□ -0.18
LINC00562-201ENST00000566385 IL25Q9H293 177 aa13.91□□□□□ -0.18
LINC00562-201ENST00000566385 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
LINC00562-201ENST00000566385 TRMT112Q9UI30 125 aaKnown RBP13.91□□□□□ -0.18
LINC00562-201ENST00000566385 AOX1Q06278 1338 aa13.9□□□□□ -0.18
LINC00562-201ENST00000566385 RBM25P49756 843 aaKnown RBP13.9□□□□□ -0.18
LINC00562-201ENST00000566385 HSP90AB3PQ58FF7 597 aa13.9□□□□□ -0.18
LINC00562-201ENST00000566385 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
LINC00562-201ENST00000566385 KIF2CQ99661 725 aa13.9□□□□□ -0.18
LINC00562-201ENST00000566385 USP42Q9H9J4 1324 aaKnown RBP13.89□□□□□ -0.19
LINC00562-201ENST00000566385 ECHDC1Q9NTX5 307 aa13.89□□□□□ -0.19
LINC00562-201ENST00000566385 BRWD3Q6RI45 1802 aa13.89□□□□□ -0.19
LINC00562-201ENST00000566385 ZNF831Q5JPB2 1677 aa13.89□□□□□ -0.19
LINC00562-201ENST00000566385 CHMLP26374 656 aa13.89□□□□□ -0.19
LINC00562-201ENST00000566385 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
LINC00562-201ENST00000566385 TTC41PQ6P2S7 1318 aa13.88□□□□□ -0.19
LINC00562-201ENST00000566385 IRS4O14654 1257 aaPredicted RBP13.88□□□□□ -0.19
LINC00562-201ENST00000566385 CSF1RP07333 972 aa13.88□□□□□ -0.19
LINC00562-201ENST00000566385 TNNI3KQ59H18 835 aa13.88□□□□□ -0.19
LINC00562-201ENST00000566385 TTLL11Q8NHH1 800 aa13.88□□□□□ -0.19
LINC00562-201ENST00000566385 USP26Q9BXU7 913 aa13.88□□□□□ -0.19
LINC00562-201ENST00000566385 DBNLQ9UJU6 430 aaKnown RBP13.88□□□□□ -0.19
LINC00562-201ENST00000566385 CCNL1Q9UK58 526 aaPredicted RBP13.88□□□□□ -0.19
LINC00562-201ENST00000566385 FPGT-TNNI3KV9GXZ4 949 aa13.88□□□□□ -0.19
LINC00562-201ENST00000566385 PLA2G12BQ9BX93 195 aa13.88□□□□□ -0.19
LINC00562-201ENST00000566385 GREM2Q9H772 168 aa13.88□□□□□ -0.19
LINC00562-201ENST00000566385 GLRX3O76003 335 aaKnown RBP13.87□□□□□ -0.19
LINC00562-201ENST00000566385 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
LINC00562-201ENST00000566385 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
LINC00562-201ENST00000566385 NDUFB9Q9Y6M9 179 aa13.87□□□□□ -0.19
LINC00562-201ENST00000566385 CDHR2Q9BYE9 1310 aa13.87□□□□□ -0.19
LINC00562-201ENST00000566385 TIMM10P62072 90 aa13.87□□□□□ -0.19
LINC00562-201ENST00000566385 DBNDD2Q9BQY9 259 aa13.87□□□□□ -0.19
LINC00562-201ENST00000566385 BOLA2Q9H3K6 86 aa13.87□□□□□ -0.19
LINC00562-201ENST00000566385 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
LINC00562-201ENST00000566385 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
LINC00562-201ENST00000566385 EYA2O00167 538 aa13.86□□□□□ -0.19
LINC00562-201ENST00000566385 CASC1Q6TDU7 716 aa13.86□□□□□ -0.19
LINC00562-201ENST00000566385 ESYT1Q9BSJ8 1104 aa13.86□□□□□ -0.19
LINC00562-201ENST00000566385 TBC1D2Q9BYX2 928 aa13.86□□□□□ -0.19
LINC00562-201ENST00000566385 LY75O60449 1722 aa13.86□□□□□ -0.19
LINC00562-201ENST00000566385 MYH3P11055 1940 aa13.86□□□□□ -0.19
LINC00562-201ENST00000566385 CTSWP56202 376 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms