RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 KRT24Q2M2I5 525 aa26.28■■□□□ 1.8
CLN6-207ENST00000566347 COPS6Q7L5N1 327 aa26.28■■□□□ 1.8
CLN6-207ENST00000566347 XAGE3Q8WTP9 111 aa26.27■■□□□ 1.8
CLN6-207ENST00000566347 UTP14AQ9BVJ6 771 aaKnown RBP26.27■■□□□ 1.8
CLN6-207ENST00000566347 RNF123Q5XPI4 1314 aa26.27■■□□□ 1.8
CLN6-207ENST00000566347 ANKRD36CQ5JPF3 1778 aa26.26■■□□□ 1.79
CLN6-207ENST00000566347 CALD1Q05682 793 aaKnown RBP26.26■■□□□ 1.79
CLN6-207ENST00000566347 AIMP1Q12904 312 aaKnown RBP26.26■■□□□ 1.79
CLN6-207ENST00000566347 HDGFL1Q5TGJ6 251 aa26.26■■□□□ 1.79
CLN6-207ENST00000566347 CC2D2BQ6DHV5 1058 aa26.26■■□□□ 1.79
CLN6-207ENST00000566347 APAF1O14727 1248 aa26.25■■□□□ 1.79
CLN6-207ENST00000566347 OLFM4Q6UX06 510 aa26.25■■□□□ 1.79
CLN6-207ENST00000566347 RBM17Q96I25 401 aaKnown RBP26.25■■□□□ 1.79
CLN6-207ENST00000566347 NLRP3Q96P20 1036 aa26.24■■□□□ 1.79
CLN6-207ENST00000566347 CRAMP1Q96RY5 1269 aa26.24■■□□□ 1.79
CLN6-207ENST00000566347 ZNF277Q9NRM2 450 aaPredicted RBP26.24■■□□□ 1.79
CLN6-207ENST00000566347 CHPF2Q9P2E5 772 aa26.24■■□□□ 1.79
CLN6-207ENST00000566347 POTECB2RU33 542 aa26.23■■□□□ 1.79
CLN6-207ENST00000566347 GRIPAP1Q4V328 841 aa26.23■■□□□ 1.79
CLN6-207ENST00000566347 SLC10A5Q5PT55 438 aa26.23■■□□□ 1.79
CLN6-207ENST00000566347 MBIPQ9NS73 344 aa26.23■■□□□ 1.79
CLN6-207ENST00000566347 DBF4Q9UBU7 674 aaPredicted RBP26.23■■□□□ 1.79
CLN6-207ENST00000566347 TCIRG1Q13488 830 aa26.22■■□□□ 1.79
CLN6-207ENST00000566347 PSMD1Q99460 953 aa26.22■■□□□ 1.79
CLN6-207ENST00000566347 IFT57Q9NWB7 429 aa26.22■■□□□ 1.79
CLN6-207ENST00000566347 DDNO94850 711 aaPredicted RBP26.21■■□□□ 1.79
CLN6-207ENST00000566347 ZNF853P0CG23 659 aa26.21■■□□□ 1.79
CLN6-207ENST00000566347 IARSP41252 1262 aaKnown RBP26.21■■□□□ 1.79
CLN6-207ENST00000566347 GNAI1P63096 354 aa26.21■■□□□ 1.79
CLN6-207ENST00000566347 DUSP27Q5VZP5 1158 aa26.21■■□□□ 1.79
CLN6-207ENST00000566347 NLRP10Q86W26 655 aa26.21■■□□□ 1.79
CLN6-207ENST00000566347 SYNE4Q8N205 404 aa26.21■■□□□ 1.79
CLN6-207ENST00000566347 SNED1Q8TER0 1413 aa26.21■■□□□ 1.79
CLN6-207ENST00000566347 DNAJC5GQ8N7S2 189 aa26.2■■□□□ 1.78
CLN6-207ENST00000566347 C3orf67Q6ZVT6 689 aa26.19■■□□□ 1.78
CLN6-207ENST00000566347 HYPKQ9NX55 129 aa26.19■■□□□ 1.78
CLN6-207ENST00000566347 IQCA1LA6NCM1 817 aa26.18■■□□□ 1.78
CLN6-207ENST00000566347 PPEF1O14829 653 aaPredicted RBP26.18■■□□□ 1.78
CLN6-207ENST00000566347 PLBD2Q8NHP8 589 aa26.18■■□□□ 1.78
CLN6-207ENST00000566347 L3MBTL3Q96JM7 780 aaPredicted RBP26.18■■□□□ 1.78
CLN6-207ENST00000566347 ANKRD13DQ6ZTN6 518 aa26.17■■□□□ 1.78
CLN6-207ENST00000566347 TRMT112Q9UI30 125 aaKnown RBP26.17■■□□□ 1.78
CLN6-207ENST00000566347 SH3TC1Q8TE82 1336 aa26.16■■□□□ 1.78
CLN6-207ENST00000566347 SCN4AP35499 1836 aa26.16■■□□□ 1.78
CLN6-207ENST00000566347 JDP2Q8WYK2 163 aa26.16■■□□□ 1.78
CLN6-207ENST00000566347 TMX4Q9H1E5 349 aaPredicted RBP26.16■■□□□ 1.78
CLN6-207ENST00000566347 ZNF541Q9H0D2 1346 aa26.14■■□□□ 1.78
CLN6-207ENST00000566347 FZD9O00144 591 aa26.14■■□□□ 1.78
CLN6-207ENST00000566347 LAMB2P55268 1798 aa26.13■■□□□ 1.77
CLN6-207ENST00000566347 HCLS1P14317 486 aaPredicted RBP26.13■■□□□ 1.77
CLN6-207ENST00000566347 HTRA3P83110 453 aa26.13■■□□□ 1.77
CLN6-207ENST00000566347 CHMP4AQ9BY43 222 aa26.13■■□□□ 1.77
CLN6-207ENST00000566347 ATP6V0A2Q9Y487 856 aa26.13■■□□□ 1.77
CLN6-207ENST00000566347 ABCC4O15439 1325 aa26.13■■□□□ 1.77
CLN6-207ENST00000566347 CHADLQ6NUI6 762 aa26.12■■□□□ 1.77
CLN6-207ENST00000566347 KLRG1Q96E93 195 aa26.12■■□□□ 1.77
CLN6-207ENST00000566347 ISCA1Q9BUE6 129 aa26.12■■□□□ 1.77
CLN6-207ENST00000566347 TCERG1O14776 1098 aaKnown RBP26.11■■□□□ 1.77
CLN6-207ENST00000566347 BBOX1O75936 387 aa26.11■■□□□ 1.77
CLN6-207ENST00000566347 CCDC184Q52MB2 194 aa26.11■■□□□ 1.77
CLN6-207ENST00000566347 DDX46Q7L014 1031 aaKnown RBP26.1■■□□□ 1.77
CLN6-207ENST00000566347 GPC2Q8N158 579 aa26.1■■□□□ 1.77
CLN6-207ENST00000566347 TAF1DQ9H5J8 278 aaPredicted RBP26.1■■□□□ 1.77
CLN6-207ENST00000566347 ZNF316A6NFI3 1004 aaPredicted RBP26.09■■□□□ 1.77
CLN6-207ENST00000566347 EIF6P56537 245 aaKnown RBP26.09■■□□□ 1.77
CLN6-207ENST00000566347 GOLGA2Q08379 1002 aa26.09■■□□□ 1.77
CLN6-207ENST00000566347 LARGE2Q8N3Y3 721 aa26.09■■□□□ 1.77
CLN6-207ENST00000566347 VPS33BQ9H267 617 aa26.09■■□□□ 1.77
CLN6-207ENST00000566347 HACL1Q9UJ83 578 aa26.09■■□□□ 1.77
CLN6-207ENST00000566347 ELL2O00472 640 aaPredicted RBP26.08■■□□□ 1.77
CLN6-207ENST00000566347 TRIM28Q13263 835 aaKnown RBP26.08■■□□□ 1.77
CLN6-207ENST00000566347 CCDC27Q2M243 656 aa26.08■■□□□ 1.77
CLN6-207ENST00000566347 LDHDQ86WU2 507 aa26.08■■□□□ 1.77
CLN6-207ENST00000566347 ATP5J2-PTCD1G3V325 749 aa26.07■■□□□ 1.76
CLN6-207ENST00000566347 ANP32CO43423 234 aa26.07■■□□□ 1.76
CLN6-207ENST00000566347 GRAPQ13588 217 aa26.07■■□□□ 1.76
CLN6-207ENST00000566347 RIC3Q7Z5B4 369 aa26.07■■□□□ 1.76
CLN6-207ENST00000566347 SP8Q8IXZ3 490 aa26.07■■□□□ 1.76
CLN6-207ENST00000566347 C8orf58Q8NAV2 365 aa26.07■■□□□ 1.76
CLN6-207ENST00000566347 SUPT20HQ8NEM7 779 aa26.07■■□□□ 1.76
CLN6-207ENST00000566347 GRAPLQ8TC17 118 aaPredicted RBP26.07■■□□□ 1.76
CLN6-207ENST00000566347 POTEIP0CG38 1075 aa26.06■■□□□ 1.76
CLN6-207ENST00000566347 POTEJP0CG39 1038 aa26.06■■□□□ 1.76
CLN6-207ENST00000566347 SLC51AQ86UW1 340 aa26.06■■□□□ 1.76
CLN6-207ENST00000566347 COL4A5P29400 1685 aa26.06■■□□□ 1.76
CLN6-207ENST00000566347 DDX60Q8IY21 1712 aaKnown RBP26.05■■□□□ 1.76
CLN6-207ENST00000566347 PPIP5K2O43314 1243 aa26.05■■□□□ 1.76
CLN6-207ENST00000566347 CCDC30Q5VVM6 783 aa26.05■■□□□ 1.76
CLN6-207ENST00000566347 TMC4Q7Z404 712 aa26.05■■□□□ 1.76
CLN6-207ENST00000566347 NIM1KQ8IY84 436 aa26.05■■□□□ 1.76
CLN6-207ENST00000566347 FAM89AQ96GI7 184 aa26.05■■□□□ 1.76
CLN6-207ENST00000566347 RTFDC1Q9BY42 306 aaPredicted RBP26.05■■□□□ 1.76
CLN6-207ENST00000566347 MRS2Q9HD23 443 aa26.05■■□□□ 1.76
CLN6-207ENST00000566347 EPHX2P34913 555 aa26.04■■□□□ 1.76
CLN6-207ENST00000566347 NCBP3Q53F19 620 aaKnown RBP26.04■■□□□ 1.76
CLN6-207ENST00000566347 DPP8Q6V1X1 898 aaPredicted RBP26.04■■□□□ 1.76
CLN6-207ENST00000566347 PNMA8AQ86V59 439 aaPredicted RBP26.04■■□□□ 1.76
CLN6-207ENST00000566347 JMYQ8N9B5 988 aa26.04■■□□□ 1.76
CLN6-207ENST00000566347 PHAXQ9H814 394 aaKnown RBP26.04■■□□□ 1.76
CLN6-207ENST00000566347 EAPPQ56P03 285 aaPredicted RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms