RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 IGKV5-2P06315 115 aa15.76■□□□□ 0.11
NR4A1-221ENST00000565848 MS4A1P11836 297 aa15.76■□□□□ 0.11
NR4A1-221ENST00000565848 TRIM28Q13263 835 aaKnown RBP15.76■□□□□ 0.11
NR4A1-221ENST00000565848 HLFQ16534 295 aa15.76■□□□□ 0.11
NR4A1-221ENST00000565848 CLEC4GQ6UXB4 293 aa15.76■□□□□ 0.11
NR4A1-221ENST00000565848 NMRK2Q9NPI5 230 aa15.76■□□□□ 0.11
NR4A1-221ENST00000565848 TBC1D2BQ9UPU7 963 aa15.76■□□□□ 0.11
NR4A1-221ENST00000565848 BCS1LQ9Y276 419 aa15.76■□□□□ 0.11
NR4A1-221ENST00000565848 TRAPPC3LQ5T215 181 aa15.75■□□□□ 0.11
NR4A1-221ENST00000565848 KIF6Q6ZMV9 814 aa15.75■□□□□ 0.11
NR4A1-221ENST00000565848 C16orf71Q8IYS4 520 aaPredicted RBP15.75■□□□□ 0.11
NR4A1-221ENST00000565848 ISCA1Q9BUE6 129 aa15.75■□□□□ 0.11
NR4A1-221ENST00000565848 ZBTB3Q9H5J0 574 aa15.75■□□□□ 0.11
NR4A1-221ENST00000565848 TCIRG1Q13488 830 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 RIC3Q7Z5B4 369 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 ZNF34Q8IZ26 560 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 TNS4Q8IZW8 715 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 TMEM57Q8N5G2 664 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 LINS1Q8NG48 757 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 PANK1Q8TE04 598 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 CLUAP1Q96AJ1 413 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 NRXN2Q9P2S2 1712 aa15.74■□□□□ 0.11
NR4A1-221ENST00000565848 A0A0G2JLW4 131 aa15.73■□□□□ 0.11
NR4A1-221ENST00000565848 GYS1P13807 737 aa15.73■□□□□ 0.11
NR4A1-221ENST00000565848 CCT4P50991 539 aaKnown RBP15.73■□□□□ 0.11
NR4A1-221ENST00000565848 ZNF330Q9Y3S2 320 aaPredicted RBP15.73■□□□□ 0.11
NR4A1-221ENST00000565848 UTYO14607 1347 aa15.72■□□□□ 0.11
NR4A1-221ENST00000565848 NEURL1BA8MQ27 555 aa15.72■□□□□ 0.11
NR4A1-221ENST00000565848 ALDH1L1O75891 902 aa15.72■□□□□ 0.11
NR4A1-221ENST00000565848 MVPQ14764 893 aaKnown RBP15.72■□□□□ 0.11
NR4A1-221ENST00000565848 USPL1Q5W0Q7 1092 aa15.72■□□□□ 0.11
NR4A1-221ENST00000565848 SRP68Q9UHB9 627 aaKnown RBP15.72■□□□□ 0.11
NR4A1-221ENST00000565848 UBN2Q6ZU65 1347 aa15.71■□□□□ 0.11
NR4A1-221ENST00000565848 ZBTB7BO15156 539 aaPredicted RBP15.71■□□□□ 0.11
NR4A1-221ENST00000565848 MMP10P09238 476 aa15.71■□□□□ 0.11
NR4A1-221ENST00000565848 RFC4P35249 363 aa15.71■□□□□ 0.11
NR4A1-221ENST00000565848 HSP90AB3PQ58FF7 597 aa15.71■□□□□ 0.11
NR4A1-221ENST00000565848 KLRG1Q96E93 195 aa15.71■□□□□ 0.11
NR4A1-221ENST00000565848 LAMB2P55268 1798 aa15.71■□□□□ 0.11
NR4A1-221ENST00000565848 CWF19L2Q2TBE0 894 aaKnown RBP15.7■□□□□ 0.1
NR4A1-221ENST00000565848 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
NR4A1-221ENST00000565848 FTSJ3Q8IY81 847 aaKnown RBP15.7■□□□□ 0.1
NR4A1-221ENST00000565848 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
NR4A1-221ENST00000565848 MYD88Q99836 296 aa15.7■□□□□ 0.1
NR4A1-221ENST00000565848 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
NR4A1-221ENST00000565848 USP44Q9H0E7 712 aa15.7■□□□□ 0.1
NR4A1-221ENST00000565848 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
NR4A1-221ENST00000565848 ZPR1O75312 459 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 TM4SF1P30408 202 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 CASP7P55210 303 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 FKBP8Q14318 412 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 GCKRQ14397 625 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 SLC4A10Q6U841 1118 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 NLRP10Q86W26 655 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 DDX19BQ9UMR2 479 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 ZNF652Q9Y2D9 606 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 COG6Q9Y2V7 657 aa15.69■□□□□ 0.1
NR4A1-221ENST00000565848 DDX60Q8IY21 1712 aaKnown RBP15.68■□□□□ 0.1
NR4A1-221ENST00000565848 NEXNQ0ZGT2 675 aa15.68■□□□□ 0.1
NR4A1-221ENST00000565848 C9orf131Q5VYM1 1079 aa15.68■□□□□ 0.1
NR4A1-221ENST00000565848 TBC1D9BQ66K14 1250 aa15.68■□□□□ 0.1
NR4A1-221ENST00000565848 CRBNQ96SW2 442 aa15.68■□□□□ 0.1
NR4A1-221ENST00000565848 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
NR4A1-221ENST00000565848 H7C1W4 665 aa15.67■□□□□ 0.1
NR4A1-221ENST00000565848 PARP10Q53GL7 1025 aa15.67■□□□□ 0.1
NR4A1-221ENST00000565848 RBM46Q8TBY0 533 aaKnown RBP15.67■□□□□ 0.1
NR4A1-221ENST00000565848 ZBTB40Q9NUA8 1239 aa15.67■□□□□ 0.1
NR4A1-221ENST00000565848 NTSR2O95665 410 aa15.66■□□□□ 0.1
NR4A1-221ENST00000565848 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
NR4A1-221ENST00000565848 DPEP1P16444 411 aa15.66■□□□□ 0.1
NR4A1-221ENST00000565848 PRELPP51888 382 aa15.66■□□□□ 0.1
NR4A1-221ENST00000565848 TGFB2P61812 414 aa15.66■□□□□ 0.1
NR4A1-221ENST00000565848 NFIXQ14938 502 aa15.66■□□□□ 0.1
NR4A1-221ENST00000565848 ITPRIPQ8IWB1 547 aa15.66■□□□□ 0.1
NR4A1-221ENST00000565848 MEIS3Q99687 375 aa15.66■□□□□ 0.1
NR4A1-221ENST00000565848 RRAGCQ9HB90 399 aa15.66■□□□□ 0.1
NR4A1-221ENST00000565848 CWC25Q9NXE8 425 aaPredicted RBP15.66■□□□□ 0.1
NR4A1-221ENST00000565848 RIC1Q4ADV7 1423 aa15.66■□□□□ 0.1
NR4A1-221ENST00000565848 GRM8O00222 908 aa15.65■□□□□ 0.1
NR4A1-221ENST00000565848 NBPF7P0C2Y1 421 aaPredicted RBP15.65■□□□□ 0.1
NR4A1-221ENST00000565848 AAMPQ13685 434 aa15.65■□□□□ 0.1
NR4A1-221ENST00000565848 SUSD4Q5VX71 490 aa15.65■□□□□ 0.1
NR4A1-221ENST00000565848 NLGN1Q8N2Q7 840 aa15.65■□□□□ 0.1
NR4A1-221ENST00000565848 EXOC6Q8TAG9 804 aa15.65■□□□□ 0.1
NR4A1-221ENST00000565848 NIP7Q9Y221 180 aaKnown RBP eCLIP15.65■□□□□ 0.1
NR4A1-221ENST00000565848 CDHR2Q9BYE9 1310 aa15.65■□□□□ 0.1
NR4A1-221ENST00000565848 CARMIL3Q8ND23 1372 aa15.64■□□□□ 0.09
NR4A1-221ENST00000565848 POLRMTO00411 1230 aaKnown RBP15.64■□□□□ 0.09
NR4A1-221ENST00000565848 PCCAP05165 728 aaPredicted RBP15.64■□□□□ 0.09
NR4A1-221ENST00000565848 JMYQ8N9B5 988 aa15.64■□□□□ 0.09
NR4A1-221ENST00000565848 ZBTB38Q8NAP3 1195 aaPredicted RBP15.64■□□□□ 0.09
NR4A1-221ENST00000565848 KAZALD1Q96I82 304 aa15.64■□□□□ 0.09
NR4A1-221ENST00000565848 MYH3P11055 1940 aa15.64■□□□□ 0.09
NR4A1-221ENST00000565848 GPTP24298 496 aa15.63■□□□□ 0.09
NR4A1-221ENST00000565848 IRX6P78412 446 aaPredicted RBP15.63■□□□□ 0.09
NR4A1-221ENST00000565848 DDR1Q08345 913 aa15.63■□□□□ 0.09
NR4A1-221ENST00000565848 FSTL1Q12841 308 aa15.63■□□□□ 0.09
NR4A1-221ENST00000565848 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
NR4A1-221ENST00000565848 GNAI3P08754 354 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms