RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 ZNF330Q9Y3S2 320 aaPredicted RBP15.25■□□□□ 0.03
CAPN3-215ENST00000565559 SLX4Q8IY92 1834 aa15.24■□□□□ 0.03
CAPN3-215ENST00000565559 IARSP41252 1262 aaKnown RBP15.24■□□□□ 0.03
CAPN3-215ENST00000565559 AKAP4Q5JQC9 854 aa15.24■□□□□ 0.03
CAPN3-215ENST00000565559 CST9Q5W186 159 aa15.24■□□□□ 0.03
CAPN3-215ENST00000565559 C7orf43Q8WVR3 580 aa15.24■□□□□ 0.03
CAPN3-215ENST00000565559 GJA3Q9Y6H8 435 aa15.24■□□□□ 0.03
CAPN3-215ENST00000565559 NPR1P16066 1061 aa15.23■□□□□ 0.03
CAPN3-215ENST00000565559 EIF6P56537 245 aaKnown RBP15.23■□□□□ 0.03
CAPN3-215ENST00000565559 FMR1Q06787 632 aaKnown RBP eCLIP15.23■□□□□ 0.03
CAPN3-215ENST00000565559 AEBP1Q8IUX7 1158 aa15.23■□□□□ 0.03
CAPN3-215ENST00000565559 MS4A3Q96HJ5 214 aa15.23■□□□□ 0.03
CAPN3-215ENST00000565559 TRAF5O00463 557 aa15.22■□□□□ 0.03
CAPN3-215ENST00000565559 USP50Q70EL3 339 aaPredicted RBP15.22■□□□□ 0.03
CAPN3-215ENST00000565559 SAPCD2Q86UD0 394 aa15.22■□□□□ 0.03
CAPN3-215ENST00000565559 GCC1Q96CN9 775 aa15.22■□□□□ 0.03
CAPN3-215ENST00000565559 HHIPL1Q96JK4 782 aa15.22■□□□□ 0.03
CAPN3-215ENST00000565559 TBC1D2BQ9UPU7 963 aa15.22■□□□□ 0.03
CAPN3-215ENST00000565559 CIAPIN1Q6FI81 312 aa15.21■□□□□ 0.03
CAPN3-215ENST00000565559 SULT6B1Q6IMI4 303 aa15.21■□□□□ 0.03
CAPN3-215ENST00000565559 TTC5Q8N0Z6 440 aa15.21■□□□□ 0.03
CAPN3-215ENST00000565559 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
CAPN3-215ENST00000565559 CELF2O95319 508 aaKnown RBP15.2■□□□□ 0.02
CAPN3-215ENST00000565559 NBPF5PQ86XG9 351 aaPredicted RBP15.2■□□□□ 0.02
CAPN3-215ENST00000565559 SYNE4Q8N205 404 aa15.2■□□□□ 0.02
CAPN3-215ENST00000565559 LGR6Q9HBX8 967 aa15.2■□□□□ 0.02
CAPN3-215ENST00000565559 ARFGEF2Q9Y6D5 1785 aa15.2■□□□□ 0.02
CAPN3-215ENST00000565559 CASP8AP2Q9UKL3 1982 aa15.19■□□□□ 0.02
CAPN3-215ENST00000565559 NOGQ13253 232 aa15.19■□□□□ 0.02
CAPN3-215ENST00000565559 TEX13AQ9BXU3 409 aaPredicted RBP15.19■□□□□ 0.02
CAPN3-215ENST00000565559 SCN7AQ01118 1682 aa15.19■□□□□ 0.02
CAPN3-215ENST00000565559 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
CAPN3-215ENST00000565559 CLSPNQ9HAW4 1339 aa15.18■□□□□ 0.02
CAPN3-215ENST00000565559 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
CAPN3-215ENST00000565559 IL6STP40189 918 aaPredicted RBP15.18■□□□□ 0.02
CAPN3-215ENST00000565559 EPS15P42566 896 aa15.18■□□□□ 0.02
CAPN3-215ENST00000565559 CLCN6P51797 869 aa15.18■□□□□ 0.02
CAPN3-215ENST00000565559 NBPF15Q8N660 670 aa15.18■□□□□ 0.02
CAPN3-215ENST00000565559 MRC1P22897 1456 aa15.18■□□□□ 0.02
CAPN3-215ENST00000565559 CACNA1SQ13698 1873 aa15.18■□□□□ 0.02
CAPN3-215ENST00000565559 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
CAPN3-215ENST00000565559 ALDH1B1P30837 517 aa15.17■□□□□ 0.02
CAPN3-215ENST00000565559 SCNN1DP51172 638 aa15.17■□□□□ 0.02
CAPN3-215ENST00000565559 OLFM4Q6UX06 510 aa15.17■□□□□ 0.02
CAPN3-215ENST00000565559 PSMD1Q99460 953 aa15.17■□□□□ 0.02
CAPN3-215ENST00000565559 IFNL1Q8IU54 200 aa15.16■□□□□ 0.02
CAPN3-215ENST00000565559 PCDHB8Q9UN66 801 aa15.16■□□□□ 0.02
CAPN3-215ENST00000565559 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
CAPN3-215ENST00000565559 CAMTA2O94983 1202 aa15.15■□□□□ 0.02
CAPN3-215ENST00000565559 ZNF408Q9H9D4 720 aa15.15■□□□□ 0.02
CAPN3-215ENST00000565559 ADARB2Q9NS39 739 aaKnown RBP15.15■□□□□ 0.02
CAPN3-215ENST00000565559 SAGE1Q9NXZ1 904 aa15.15■□□□□ 0.02
CAPN3-215ENST00000565559 TRPM7Q96QT4 1865 aa15.14■□□□□ 0.01
CAPN3-215ENST00000565559 KLRG2A4D1S0 409 aaPredicted RBP15.14■□□□□ 0.01
CAPN3-215ENST00000565559 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
CAPN3-215ENST00000565559 TPTE2Q6XPS3 522 aa15.14■□□□□ 0.01
CAPN3-215ENST00000565559 LARGE2Q8N3Y3 721 aa15.14■□□□□ 0.01
CAPN3-215ENST00000565559 TRPC6Q9Y210 931 aa15.14■□□□□ 0.01
CAPN3-215ENST00000565559 ZNF652Q9Y2D9 606 aa15.14■□□□□ 0.01
CAPN3-215ENST00000565559 DZIP3Q86Y13 1208 aaKnown RBP15.13■□□□□ 0.01
CAPN3-215ENST00000565559 GRIPAP1Q4V328 841 aa15.12■□□□□ 0.01
CAPN3-215ENST00000565559 CLEC4GQ6UXB4 293 aa15.12■□□□□ 0.01
CAPN3-215ENST00000565559 HEG1Q9ULI3 1381 aa15.11■□□□□ 0.01
CAPN3-215ENST00000565559 CTU1Q7Z7A3 348 aaKnown RBP15.11■□□□□ 0.01
CAPN3-215ENST00000565559 NIM1KQ8IY84 436 aa15.11■□□□□ 0.01
CAPN3-215ENST00000565559 ZNF496Q96IT1 587 aaPredicted RBP15.11■□□□□ 0.01
CAPN3-215ENST00000565559 GLIS2Q9BZE0 524 aaPredicted RBP15.11■□□□□ 0.01
CAPN3-215ENST00000565559 GPRC5DQ9NZD1 345 aa15.11■□□□□ 0.01
CAPN3-215ENST00000565559 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
CAPN3-215ENST00000565559 GTF2E1P29083 439 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-215ENST00000565559 HUNKP57058 714 aa15.1■□□□□ 0.01
CAPN3-215ENST00000565559 IL13P35225 146 aa15.09■□□□□ 0.01
CAPN3-215ENST00000565559 HABP4Q5JVS0 413 aaKnown RBP15.09■□□□□ 0.01
CAPN3-215ENST00000565559 ZNF790Q6PG37 636 aa15.09■□□□□ 0.01
CAPN3-215ENST00000565559 CDC37L1Q7L3B6 337 aa15.09■□□□□ 0.01
CAPN3-215ENST00000565559 CCER1Q8TC90 406 aaPredicted RBP15.09■□□□□ 0.01
CAPN3-215ENST00000565559 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
CAPN3-215ENST00000565559 ZIC5Q96T25 663 aa15.09■□□□□ 0.01
CAPN3-215ENST00000565559 UBR2Q8IWV8 1755 aa15.08■□□□□ 0.01
CAPN3-215ENST00000565559 A1BGP04217 495 aa15.08■□□□□ 0
CAPN3-215ENST00000565559 TEFQ10587 303 aa15.08■□□□□ 0
CAPN3-215ENST00000565559 FMNL2Q96PY5 1086 aa15.08■□□□□ 0
CAPN3-215ENST00000565559 TIMELESSQ9UNS1 1208 aa15.08■□□□□ 0
CAPN3-215ENST00000565559 NIP7Q9Y221 180 aaKnown RBP eCLIP15.08■□□□□ 0
CAPN3-215ENST00000565559 TRPA1O75762 1119 aa15.07■□□□□ 0
CAPN3-215ENST00000565559 RGMBQ6NW40 437 aa15.07■□□□□ 0
CAPN3-215ENST00000565559 MORC1Q86VD1 984 aa15.07■□□□□ 0
CAPN3-215ENST00000565559 CCDC102AQ96A19 550 aa15.07■□□□□ 0
CAPN3-215ENST00000565559 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
CAPN3-215ENST00000565559 RNF186Q9NXI6 227 aa15.07■□□□□ 0
CAPN3-215ENST00000565559 PGAP2Q9UHJ9 254 aa15.07■□□□□ 0
CAPN3-215ENST00000565559 HPS5Q9UPZ3 1129 aa15.07■□□□□ 0
CAPN3-215ENST00000565559 FAM177BA6PVY3 158 aa15.06■□□□□ 0
CAPN3-215ENST00000565559 PKN2Q16513 984 aaKnown RBP15.06■□□□□ 0
CAPN3-215ENST00000565559 MTHFSDQ2M296 383 aaKnown RBP15.06■□□□□ 0
CAPN3-215ENST00000565559 DCBLD2Q96PD2 775 aa15.06■□□□□ 0
CAPN3-215ENST00000565559 TMX4Q9H1E5 349 aaPredicted RBP15.06■□□□□ 0
CAPN3-215ENST00000565559 SNED1Q8TER0 1413 aa15.06■□□□□ 0
CAPN3-215ENST00000565559 COL4A5P29400 1685 aa15.06■□□□□ 0
CAPN3-215ENST00000565559 RGL2O15211 777 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms