RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ZSCAN1Q8NBB4 408 aa8□□□□□ -1.13
PALB2-203ENST00000565038 ACDQ96AP0 544 aa8□□□□□ -1.13
PALB2-203ENST00000565038 PRR12Q9ULL5 1215 aa8□□□□□ -1.13
PALB2-203ENST00000565038 GRNP28799 593 aaKnown RBP7.99□□□□□ -1.13
PALB2-203ENST00000565038 SERPINB4P48594 390 aa7.99□□□□□ -1.13
PALB2-203ENST00000565038 ARSDP51689 593 aa7.99□□□□□ -1.13
PALB2-203ENST00000565038 KCNQ4P56696 695 aa7.99□□□□□ -1.13
PALB2-203ENST00000565038 INSM1Q01101 510 aaPredicted RBP7.99□□□□□ -1.13
PALB2-203ENST00000565038 SPEM2Q0P670 501 aa7.99□□□□□ -1.13
PALB2-203ENST00000565038 ZNF211Q13398 564 aaPredicted RBP7.99□□□□□ -1.13
PALB2-203ENST00000565038 RGL4Q8IZJ4 473 aa7.99□□□□□ -1.13
PALB2-203ENST00000565038 HELQQ8TDG4 1101 aa7.99□□□□□ -1.13
PALB2-203ENST00000565038 OXCT2Q9BYC2 517 aaPredicted RBP7.99□□□□□ -1.13
PALB2-203ENST00000565038 MTMR7Q9Y216 660 aa7.99□□□□□ -1.13
PALB2-203ENST00000565038 ARID4AP29374 1257 aaPredicted RBP7.98□□□□□ -1.13
PALB2-203ENST00000565038 PCBP4P57723 403 aaKnown RBP7.98□□□□□ -1.13
PALB2-203ENST00000565038 EPB42P16452 691 aa7.97□□□□□ -1.13
PALB2-203ENST00000565038 MPSTP25325 297 aa7.97□□□□□ -1.13
PALB2-203ENST00000565038 ZNF385CQ66K41 422 aaPredicted RBP7.97□□□□□ -1.13
PALB2-203ENST00000565038 ATCAYQ86WG3 371 aa7.97□□□□□ -1.13
PALB2-203ENST00000565038 CMTR1Q8N1G2 835 aaKnown RBP7.97□□□□□ -1.13
PALB2-203ENST00000565038 KLF15Q9UIH9 416 aa7.97□□□□□ -1.13
PALB2-203ENST00000565038 GGA1Q9UJY5 639 aa7.97□□□□□ -1.13
PALB2-203ENST00000565038 RTCBQ9Y3I0 505 aaKnown RBP7.97□□□□□ -1.13
PALB2-203ENST00000565038 NEURL1BA8MQ27 555 aa7.96□□□□□ -1.14
PALB2-203ENST00000565038 BRD1O95696 1058 aa7.96□□□□□ -1.14
PALB2-203ENST00000565038 CELA2BP08218 269 aaPredicted RBP7.96□□□□□ -1.14
PALB2-203ENST00000565038 ZAP70P43403 619 aa7.96□□□□□ -1.14
PALB2-203ENST00000565038 ZNF468Q5VIY5 522 aaPredicted RBP7.96□□□□□ -1.14
PALB2-203ENST00000565038 SYT9Q86SS6 491 aa7.96□□□□□ -1.14
PALB2-203ENST00000565038 SVOPQ8N4V2 548 aa7.96□□□□□ -1.14
PALB2-203ENST00000565038 BHMTQ93088 406 aa7.96□□□□□ -1.14
PALB2-203ENST00000565038 ARAFP10398 606 aa7.95□□□□□ -1.14
PALB2-203ENST00000565038 BCRP11274 1271 aa7.95□□□□□ -1.14
PALB2-203ENST00000565038 FKBP4Q02790 459 aaKnown RBP eCLIP7.95□□□□□ -1.14
PALB2-203ENST00000565038 C1orf229Q6ZS94 237 aaPredicted RBP7.95□□□□□ -1.14
PALB2-203ENST00000565038 KRT25Q7Z3Z0 450 aa7.95□□□□□ -1.14
PALB2-203ENST00000565038 TXNDC2Q86VQ3 553 aa7.95□□□□□ -1.14
PALB2-203ENST00000565038 ABTB2Q8N961 1025 aa7.95□□□□□ -1.14
PALB2-203ENST00000565038 GPR152Q8TDT2 470 aa7.95□□□□□ -1.14
PALB2-203ENST00000565038 TRAIPQ9BWF2 469 aa7.95□□□□□ -1.14
PALB2-203ENST00000565038 GSX2Q9BZM3 304 aa7.95□□□□□ -1.14
PALB2-203ENST00000565038 CCINQ13939 588 aa7.94□□□□□ -1.14
PALB2-203ENST00000565038 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
PALB2-203ENST00000565038 GOLGA6L1Q8N7Z2 621 aa7.94□□□□□ -1.14
PALB2-203ENST00000565038 SASH3O75995 380 aa7.93□□□□□ -1.14
PALB2-203ENST00000565038 ADH6P28332 368 aa7.93□□□□□ -1.14
PALB2-203ENST00000565038 EIF1AXP47813 144 aaKnown RBP7.93□□□□□ -1.14
PALB2-203ENST00000565038 MAP3K10Q02779 954 aa7.93□□□□□ -1.14
PALB2-203ENST00000565038 FCHSD1Q86WN1 690 aa7.93□□□□□ -1.14
PALB2-203ENST00000565038 GALNT6Q8NCL4 622 aa7.93□□□□□ -1.14
PALB2-203ENST00000565038 CCER1Q8TC90 406 aaPredicted RBP7.93□□□□□ -1.14
PALB2-203ENST00000565038 PNMA5Q96PV4 448 aa7.93□□□□□ -1.14
PALB2-203ENST00000565038 IGFLR1Q9H665 355 aa7.93□□□□□ -1.14
PALB2-203ENST00000565038 GDF2Q9UK05 429 aaPredicted RBP7.93□□□□□ -1.14
PALB2-203ENST00000565038 KCNMB2Q9Y691 235 aa7.93□□□□□ -1.14
PALB2-203ENST00000565038 H3BRB1 525 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 OIP5O43482 229 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 ICMTO60725 284 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 XYLBO75191 536 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 PDIA4P13667 645 aaKnown RBP7.92□□□□□ -1.14
PALB2-203ENST00000565038 NFKB1P19838 968 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 TARSP26639 723 aaKnown RBP7.92□□□□□ -1.14
PALB2-203ENST00000565038 SF3B2Q13435 895 aaKnown RBP7.92□□□□□ -1.14
PALB2-203ENST00000565038 NEUROD1Q13562 356 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 AAMPQ13685 434 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 TRIP4Q15650 581 aaPredicted RBP7.92□□□□□ -1.14
PALB2-203ENST00000565038 EDARADDQ8WWZ3 215 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 PIK3R5Q8WYR1 880 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 EDEM1Q92611 657 aa7.92□□□□□ -1.14
PALB2-203ENST00000565038 TUT1Q9H6E5 874 aaKnown RBP7.92□□□□□ -1.14
PALB2-203ENST00000565038 AVENQ9NQS1 362 aaPredicted RBP7.92□□□□□ -1.14
PALB2-203ENST00000565038 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.92□□□□□ -1.14
PALB2-203ENST00000565038 SHISA8B8ZZ34 492 aa7.91□□□□□ -1.14
PALB2-203ENST00000565038 FAM13AO94988 1023 aa7.91□□□□□ -1.14
PALB2-203ENST00000565038 NPR3P17342 541 aa7.91□□□□□ -1.14
PALB2-203ENST00000565038 DNM1Q05193 864 aaKnown RBP7.91□□□□□ -1.14
PALB2-203ENST00000565038 TBC1D8BQ0IIM8 1120 aa7.91□□□□□ -1.14
PALB2-203ENST00000565038 SLCO4C1Q6ZQN7 724 aa7.91□□□□□ -1.14
PALB2-203ENST00000565038 ZFATQ9P243 1243 aa7.91□□□□□ -1.14
PALB2-203ENST00000565038 EGFL7Q9UHF1 273 aa7.91□□□□□ -1.14
PALB2-203ENST00000565038 UBAP1LF5GYI3 381 aa7.9□□□□□ -1.14
PALB2-203ENST00000565038 SIN3BO75182 1162 aa7.9□□□□□ -1.14
PALB2-203ENST00000565038 ARHGEF15O94989 841 aa7.9□□□□□ -1.14
PALB2-203ENST00000565038 EPXP11678 715 aa7.9□□□□□ -1.14
PALB2-203ENST00000565038 GLYCTKQ8IVS8 523 aa7.9□□□□□ -1.14
PALB2-203ENST00000565038 NUDT16Q96DE0 195 aaKnown RBP7.9□□□□□ -1.14
PALB2-203ENST00000565038 FAM13BQ9NYF5 915 aa7.9□□□□□ -1.14
PALB2-203ENST00000565038 RARAP10276 462 aa7.89□□□□□ -1.15
PALB2-203ENST00000565038 ALKBH2Q6NS38 261 aa7.89□□□□□ -1.15
PALB2-203ENST00000565038 AEBP1Q8IUX7 1158 aa7.89□□□□□ -1.15
PALB2-203ENST00000565038 NEDD1Q8NHV4 660 aa7.89□□□□□ -1.15
PALB2-203ENST00000565038 GNEQ9Y223 722 aaKnown RBP7.89□□□□□ -1.15
PALB2-203ENST00000565038 EGFRP00533 1210 aa7.88□□□□□ -1.15
PALB2-203ENST00000565038 PDGFAP04085 211 aa7.88□□□□□ -1.15
PALB2-203ENST00000565038 AMPD1P23109 780 aa7.88□□□□□ -1.15
PALB2-203ENST00000565038 ECM1Q16610 540 aa7.88□□□□□ -1.15
PALB2-203ENST00000565038 UBE2OQ9C0C9 1292 aaKnown RBP7.88□□□□□ -1.15
PALB2-203ENST00000565038 C11orf16Q9NQ32 467 aa7.88□□□□□ -1.15
PALB2-203ENST00000565038 CCDC87Q9NVE4 849 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms