RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 RIC3Q7Z5B4 369 aa18.33■□□□□ 0.53
HERC2-207ENST00000564734 RAPGEF4Q8WZA2 1011 aa18.33■□□□□ 0.53
HERC2-207ENST00000564734 MAP4K1Q92918 833 aa18.33■□□□□ 0.53
HERC2-207ENST00000564734 GDPD2Q9HCC8 539 aa18.33■□□□□ 0.53
HERC2-207ENST00000564734 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.53
HERC2-207ENST00000564734 METTL22Q9BUU2 404 aaPredicted RBP18.33■□□□□ 0.52
HERC2-207ENST00000564734 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
HERC2-207ENST00000564734 STX6O43752 255 aa18.32■□□□□ 0.52
HERC2-207ENST00000564734 NFATC2IPQ8NCF5 419 aa18.32■□□□□ 0.52
HERC2-207ENST00000564734 XAGE3Q8WTP9 111 aa18.32■□□□□ 0.52
HERC2-207ENST00000564734 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
HERC2-207ENST00000564734 CCDC8Q9H0W5 538 aaPredicted RBP18.32■□□□□ 0.52
HERC2-207ENST00000564734 HIP1O00291 1037 aa18.32■□□□□ 0.52
HERC2-207ENST00000564734 EPHA10Q5JZY3 1008 aa18.32■□□□□ 0.52
HERC2-207ENST00000564734 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
HERC2-207ENST00000564734 ST3GAL1Q11201 340 aa18.32■□□□□ 0.52
HERC2-207ENST00000564734 NMIQ13287 307 aaPredicted RBP18.32■□□□□ 0.52
HERC2-207ENST00000564734 PLEKHG2Q9H7P9 1386 aa18.31■□□□□ 0.52
HERC2-207ENST00000564734 TOM1O60784 492 aa18.31■□□□□ 0.52
HERC2-207ENST00000564734 TATP17735 454 aaPredicted RBP18.31■□□□□ 0.52
HERC2-207ENST00000564734 COPS6Q7L5N1 327 aa18.31■□□□□ 0.52
HERC2-207ENST00000564734 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
HERC2-207ENST00000564734 SYAP1Q96A49 352 aaPredicted RBP18.31■□□□□ 0.52
HERC2-207ENST00000564734 ZSCAN31Q96LW9 406 aaPredicted RBP18.31■□□□□ 0.52
HERC2-207ENST00000564734 FOXD4L6Q3SYB3 417 aaPredicted RBP18.31■□□□□ 0.52
HERC2-207ENST00000564734 CREB3L3Q68CJ9 461 aa18.31■□□□□ 0.52
HERC2-207ENST00000564734 FOXD4L3Q6VB84 417 aaPredicted RBP18.31■□□□□ 0.52
HERC2-207ENST00000564734 ZNF496Q96IT1 587 aaPredicted RBP18.31■□□□□ 0.52
HERC2-207ENST00000564734 NAP1L5Q96NT1 182 aaPredicted RBP18.31■□□□□ 0.52
HERC2-207ENST00000564734 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
HERC2-207ENST00000564734 SMC3Q9UQE7 1217 aa18.31■□□□□ 0.52
HERC2-207ENST00000564734 RBM8AQ9Y5S9 174 aaKnown RBP18.31■□□□□ 0.52
HERC2-207ENST00000564734 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
HERC2-207ENST00000564734 MYL6BP14649 208 aa18.3■□□□□ 0.52
HERC2-207ENST00000564734 SH2B1Q9NRF2 756 aaPredicted RBP18.3■□□□□ 0.52
HERC2-207ENST00000564734 F13A1P00488 732 aa18.3■□□□□ 0.52
HERC2-207ENST00000564734 TSPY26PQ9H489 355 aa18.3■□□□□ 0.52
HERC2-207ENST00000564734 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.3■□□□□ 0.52
HERC2-207ENST00000564734 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
HERC2-207ENST00000564734 JCADQ9P266 1359 aa18.3■□□□□ 0.52
HERC2-207ENST00000564734 NEXNQ0ZGT2 675 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 KLHDC4Q8TBB5 520 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 MYD88Q99836 296 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
HERC2-207ENST00000564734 IFNL2Q8IZJ0 200 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 NOL7Q9UMY1 257 aaKnown RBP18.29■□□□□ 0.52
HERC2-207ENST00000564734 COL15A1P39059 1388 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 MED23Q9ULK4 1368 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 CCDC83Q8IWF9 413 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 CERKQ8TCT0 537 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 SIL1Q9H173 461 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
HERC2-207ENST00000564734 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
HERC2-207ENST00000564734 SLC27A2O14975 620 aa18.28■□□□□ 0.52
HERC2-207ENST00000564734 COPRSQ9NQ92 184 aa18.28■□□□□ 0.52
HERC2-207ENST00000564734 XIRP1Q702N8 1843 aaKnown RBP18.28■□□□□ 0.52
HERC2-207ENST00000564734 ME3Q16798 604 aa18.28■□□□□ 0.52
HERC2-207ENST00000564734 BOLA2Q9H3K6 86 aa18.28■□□□□ 0.52
HERC2-207ENST00000564734 MTMR6Q9Y217 621 aa18.28■□□□□ 0.52
HERC2-207ENST00000564734 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
HERC2-207ENST00000564734 GJB2P29033 226 aa18.27■□□□□ 0.52
HERC2-207ENST00000564734 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
HERC2-207ENST00000564734 CYP27B1O15528 508 aa18.27■□□□□ 0.52
HERC2-207ENST00000564734 ZKSCAN1P17029 563 aaPredicted RBP18.27■□□□□ 0.52
HERC2-207ENST00000564734 COL9A3Q14050 684 aaPredicted RBP18.27■□□□□ 0.51
HERC2-207ENST00000564734 RABL6Q3YEC7 729 aaPredicted RBP18.27■□□□□ 0.51
HERC2-207ENST00000564734 DCAF5Q96JK2 942 aa18.27■□□□□ 0.51
HERC2-207ENST00000564734 ALDH8A1Q9H2A2 487 aaPredicted RBP18.27■□□□□ 0.51
HERC2-207ENST00000564734 LTBP4Q8N2S1 1624 aa18.26■□□□□ 0.51
HERC2-207ENST00000564734 PHF14O94880 888 aa18.26■□□□□ 0.51
HERC2-207ENST00000564734 GLI3P10071 1580 aa18.26■□□□□ 0.51
HERC2-207ENST00000564734 PKD1L3Q7Z443 1732 aa18.26■□□□□ 0.51
HERC2-207ENST00000564734 UBE2HP62256 183 aa18.26■□□□□ 0.51
HERC2-207ENST00000564734 TPCN1Q9ULQ1 816 aa18.26■□□□□ 0.51
HERC2-207ENST00000564734 PTPN12Q05209 780 aaKnown RBP18.25■□□□□ 0.51
HERC2-207ENST00000564734 TSGA10IPQ3SY00 556 aa18.25■□□□□ 0.51
HERC2-207ENST00000564734 RNF214Q8ND24 703 aa18.25■□□□□ 0.51
HERC2-207ENST00000564734 FSD1Q9BTV5 496 aa18.25■□□□□ 0.51
HERC2-207ENST00000564734 DCCP43146 1447 aa18.25■□□□□ 0.51
HERC2-207ENST00000564734 TCHHQ07283 1943 aa18.25■□□□□ 0.51
HERC2-207ENST00000564734 ZNF500O60304 480 aaPredicted RBP18.25■□□□□ 0.51
HERC2-207ENST00000564734 MSNP26038 577 aaKnown RBP18.25■□□□□ 0.51
HERC2-207ENST00000564734 CCDC183Q5T5S1 534 aa18.25■□□□□ 0.51
HERC2-207ENST00000564734 DDX54Q8TDD1 881 aaKnown RBP18.25■□□□□ 0.51
HERC2-207ENST00000564734 ATP6V1DQ9Y5K8 247 aa18.25■□□□□ 0.51
HERC2-207ENST00000564734 ATP5JP18859 108 aa18.24■□□□□ 0.51
HERC2-207ENST00000564734 PSMA5P28066 241 aa18.24■□□□□ 0.51
HERC2-207ENST00000564734 CASP7P55210 303 aa18.24■□□□□ 0.51
HERC2-207ENST00000564734 OFD1O75665 1012 aa18.24■□□□□ 0.51
HERC2-207ENST00000564734 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
HERC2-207ENST00000564734 FMNL2Q96PY5 1086 aa18.23■□□□□ 0.51
HERC2-207ENST00000564734 DBNLQ9UJU6 430 aaKnown RBP18.23■□□□□ 0.51
HERC2-207ENST00000564734 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
HERC2-207ENST00000564734 TNNI3KQ59H18 835 aa18.23■□□□□ 0.51
HERC2-207ENST00000564734 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
HERC2-207ENST00000564734 NECAB1Q8N987 351 aa18.23■□□□□ 0.51
HERC2-207ENST00000564734 FPGT-TNNI3KV9GXZ4 949 aa18.23■□□□□ 0.51
HERC2-207ENST00000564734 KLHL34Q8N239 644 aa18.23■□□□□ 0.51
HERC2-207ENST00000564734 TAF5LO75529 589 aa18.22■□□□□ 0.51
HERC2-207ENST00000564734 PIP4K2AP48426 406 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms