RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 SLC4A2P04920 1241 aa23.42■■□□□ 1.34
PKD1-227ENST00000564313 RIC3Q7Z5B4 369 aa23.42■■□□□ 1.34
PKD1-227ENST00000564313 ZNF428Q96B54 188 aa23.42■■□□□ 1.34
PKD1-227ENST00000564313 UBN2Q6ZU65 1347 aa23.41■■□□□ 1.34
PKD1-227ENST00000564313 CT47B1P0C2W7 299 aaPredicted RBP23.41■■□□□ 1.34
PKD1-227ENST00000564313 GPTP24298 496 aa23.41■■□□□ 1.34
PKD1-227ENST00000564313 GTF2E1P29083 439 aaPredicted RBP23.41■■□□□ 1.34
PKD1-227ENST00000564313 C16orf71Q8IYS4 520 aaPredicted RBP23.41■■□□□ 1.34
PKD1-227ENST00000564313 CDCA7LQ96GN5 454 aa23.41■■□□□ 1.34
PKD1-227ENST00000564313 CHRNA5P30532 468 aa23.4■■□□□ 1.34
PKD1-227ENST00000564313 FSTL1Q12841 308 aa23.4■■□□□ 1.34
PKD1-227ENST00000564313 BRCA1P38398 1863 aaKnown RBP23.39■■□□□ 1.34
PKD1-227ENST00000564313 ANKRD31Q8N7Z5 1873 aa23.39■■□□□ 1.34
PKD1-227ENST00000564313 RIC1Q4ADV7 1423 aa23.39■■□□□ 1.33
PKD1-227ENST00000564313 DLEC1Q9Y238 1755 aa23.39■■□□□ 1.33
PKD1-227ENST00000564313 ZBED9Q6R2W3 1325 aa23.38■■□□□ 1.33
PKD1-227ENST00000564313 H0YIN7 160 aa23.38■■□□□ 1.33
PKD1-227ENST00000564313 KSR2Q6VAB6 950 aa23.38■■□□□ 1.33
PKD1-227ENST00000564313 CCDC24Q8N4L8 307 aa23.38■■□□□ 1.33
PKD1-227ENST00000564313 UTP14AQ9BVJ6 771 aaKnown RBP23.38■■□□□ 1.33
PKD1-227ENST00000564313 PIM2Q9P1W9 311 aa23.38■■□□□ 1.33
PKD1-227ENST00000564313 FAM177BA6PVY3 158 aa23.37■■□□□ 1.33
PKD1-227ENST00000564313 TCERG1O14776 1098 aaKnown RBP23.37■■□□□ 1.33
PKD1-227ENST00000564313 FLIIQ13045 1269 aa23.37■■□□□ 1.33
PKD1-227ENST00000564313 TRIM28Q13263 835 aaKnown RBP23.37■■□□□ 1.33
PKD1-227ENST00000564313 SUSD4Q5VX71 490 aa23.37■■□□□ 1.33
PKD1-227ENST00000564313 C9orf131Q5VYM1 1079 aa23.37■■□□□ 1.33
PKD1-227ENST00000564313 NLRP10Q86W26 655 aa23.37■■□□□ 1.33
PKD1-227ENST00000564313 NTSR2O95665 410 aa23.36■■□□□ 1.33
PKD1-227ENST00000564313 C2CD5Q86YS7 1000 aa23.36■■□□□ 1.33
PKD1-227ENST00000564313 ISCA1Q9BUE6 129 aa23.36■■□□□ 1.33
PKD1-227ENST00000564313 METTL22Q9BUU2 404 aaPredicted RBP23.35■■□□□ 1.33
PKD1-227ENST00000564313 KLRG2A4D1S0 409 aaPredicted RBP23.34■■□□□ 1.33
PKD1-227ENST00000564313 NEXNQ0ZGT2 675 aa23.34■■□□□ 1.33
PKD1-227ENST00000564313 FKBP5Q13451 457 aaPredicted RBP23.34■■□□□ 1.33
PKD1-227ENST00000564313 DALRD3Q5D0E6 543 aaKnown RBP23.34■■□□□ 1.33
PKD1-227ENST00000564313 MAP3K2Q9Y2U5 619 aa23.34■■□□□ 1.33
PKD1-227ENST00000564313 PI4KAP2A4QPH2 592 aa23.33■■□□□ 1.33
PKD1-227ENST00000564313 ALDH1L2Q3SY69 923 aa23.33■■□□□ 1.33
PKD1-227ENST00000564313 G2E3Q7L622 706 aa23.33■■□□□ 1.33
PKD1-227ENST00000564313 NUTM1Q86Y26 1132 aa23.33■■□□□ 1.33
PKD1-227ENST00000564313 PI4KAP1Q8N8J0 262 aa23.33■■□□□ 1.33
PKD1-227ENST00000564313 TRMT112Q9UI30 125 aaKnown RBP23.33■■□□□ 1.33
PKD1-227ENST00000564313 ARFGEF1Q9Y6D6 1849 aa23.32■■□□□ 1.32
PKD1-227ENST00000564313 ERFEQ4G0M1 354 aa23.32■■□□□ 1.32
PKD1-227ENST00000564313 CCDC191Q8NCU4 936 aa23.32■■□□□ 1.32
PKD1-227ENST00000564313 MASTLQ96GX5 879 aa23.32■■□□□ 1.32
PKD1-227ENST00000564313 MYD88Q99836 296 aa23.32■■□□□ 1.32
PKD1-227ENST00000564313 RRAGCQ9HB90 399 aa23.32■■□□□ 1.32
PKD1-227ENST00000564313 COL11A2P13942 1736 aaPredicted RBP23.32■■□□□ 1.32
PKD1-227ENST00000564313 SH3TC1Q8TE82 1336 aa23.32■■□□□ 1.32
PKD1-227ENST00000564313 ABCC12Q96J65 1359 aa23.31■■□□□ 1.32
PKD1-227ENST00000564313 ATP5J2-PTCD1G3V325 749 aa23.31■■□□□ 1.32
PKD1-227ENST00000564313 STYK1Q6J9G0 422 aa23.31■■□□□ 1.32
PKD1-227ENST00000564313 TTLL6Q8N841 843 aa23.31■■□□□ 1.32
PKD1-227ENST00000564313 KDM2BQ8NHM5 1336 aa23.31■■□□□ 1.32
PKD1-227ENST00000564313 SRGNP10124 158 aa23.3■■□□□ 1.32
PKD1-227ENST00000564313 SLC10A5Q5PT55 438 aa23.3■■□□□ 1.32
PKD1-227ENST00000564313 CNKSR1Q969H4 720 aa23.3■■□□□ 1.32
PKD1-227ENST00000564313 HSP90B1P14625 803 aaKnown RBP23.29■■□□□ 1.32
PKD1-227ENST00000564313 NPR1P16066 1061 aa23.29■■□□□ 1.32
PKD1-227ENST00000564313 DNAAF4Q8WXU2 420 aa23.29■■□□□ 1.32
PKD1-227ENST00000564313 TNRC6CQ9HCJ0 1690 aaKnown RBP23.28■■□□□ 1.32
PKD1-227ENST00000564313 HSPA1AP0DMV8 641 aaKnown RBP23.28■■□□□ 1.32
PKD1-227ENST00000564313 HSPA1BP0DMV9 641 aaKnown RBP23.28■■□□□ 1.32
PKD1-227ENST00000564313 CRY2Q49AN0 593 aa23.28■■□□□ 1.32
PKD1-227ENST00000564313 ZNF622Q969S3 477 aaKnown RBP eCLIP23.28■■□□□ 1.32
PKD1-227ENST00000564313 NLRP3Q96P20 1036 aa23.28■■□□□ 1.32
PKD1-227ENST00000564313 CWC25Q9NXE8 425 aaPredicted RBP23.28■■□□□ 1.32
PKD1-227ENST00000564313 MRPL50Q8N5N7 158 aaKnown RBP23.27■■□□□ 1.32
PKD1-227ENST00000564313 ZBTB38Q8NAP3 1195 aaPredicted RBP23.27■■□□□ 1.32
PKD1-227ENST00000564313 SSH1Q8WYL5 1049 aa23.27■■□□□ 1.32
PKD1-227ENST00000564313 RNF181Q9P0P0 153 aa23.27■■□□□ 1.32
PKD1-227ENST00000564313 PTPRCP08575 1304 aa23.27■■□□□ 1.32
PKD1-227ENST00000564313 SMC1BQ8NDV3 1235 aa23.26■■□□□ 1.31
PKD1-227ENST00000564313 PCCAP05165 728 aaPredicted RBP23.25■■□□□ 1.31
PKD1-227ENST00000564313 ALDH1B1P30837 517 aa23.25■■□□□ 1.31
PKD1-227ENST00000564313 LINS1Q8NG48 757 aa23.25■■□□□ 1.31
PKD1-227ENST00000564313 RPGRQ92834 1020 aaKnown RBP23.25■■□□□ 1.31
PKD1-227ENST00000564313 SMC4Q9NTJ3 1288 aa23.25■■□□□ 1.31
PKD1-227ENST00000564313 LAMB2P55268 1798 aa23.24■■□□□ 1.31
PKD1-227ENST00000564313 BRPF1P55201 1214 aaPredicted RBP23.24■■□□□ 1.31
PKD1-227ENST00000564313 NEURL1BA8MQ27 555 aa23.23■■□□□ 1.31
PKD1-227ENST00000564313 IGKV5-2P06315 115 aa23.23■■□□□ 1.31
PKD1-227ENST00000564313 FAM89AQ96GI7 184 aa23.23■■□□□ 1.31
PKD1-227ENST00000564313 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
PKD1-227ENST00000564313 DDX60Q8IY21 1712 aaKnown RBP23.22■■□□□ 1.31
PKD1-227ENST00000564313 HOXA10P31260 410 aaPredicted RBP23.22■■□□□ 1.31
PKD1-227ENST00000564313 SOGA3Q5TF21 947 aa23.22■■□□□ 1.31
PKD1-227ENST00000564313 IRS4O14654 1257 aaPredicted RBP23.21■■□□□ 1.31
PKD1-227ENST00000564313 HCLS1P14317 486 aaPredicted RBP23.21■■□□□ 1.31
PKD1-227ENST00000564313 PRPF40BQ6NWY9 871 aaKnown RBP23.21■■□□□ 1.31
PKD1-227ENST00000564313 CDHR2Q9BYE9 1310 aa23.21■■□□□ 1.31
PKD1-227ENST00000564313 CACNA1SQ13698 1873 aa23.2■■□□□ 1.3
PKD1-227ENST00000564313 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
PKD1-227ENST00000564313 CWF19L2Q2TBE0 894 aaKnown RBP23.2■■□□□ 1.3
PKD1-227ENST00000564313 CRAMP1Q96RY5 1269 aa23.2■■□□□ 1.3
PKD1-227ENST00000564313 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
PKD1-227ENST00000564313 SBF1O95248 1867 aa23.19■■□□□ 1.3
PKD1-227ENST00000564313 KIF16BQ96L93 1317 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms