RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 SLC4A10Q6U841 1118 aa21.44■■□□□ 1.02
CMTM3-208ENST00000564247 ZNF784Q8NCA9 323 aaPredicted RBP21.44■■□□□ 1.02
CMTM3-208ENST00000564247 PLBD2Q8NHP8 589 aa21.44■■□□□ 1.02
CMTM3-208ENST00000564247 PANK1Q8TE04 598 aa21.44■■□□□ 1.02
CMTM3-208ENST00000564247 DNAAF4Q8WXU2 420 aa21.44■■□□□ 1.02
CMTM3-208ENST00000564247 ERVV-1B6SEH8 477 aa21.43■■□□□ 1.02
CMTM3-208ENST00000564247 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
CMTM3-208ENST00000564247 DALRD3Q5D0E6 543 aaKnown RBP21.43■■□□□ 1.02
CMTM3-208ENST00000564247 TTLL7Q6ZT98 887 aa21.43■■□□□ 1.02
CMTM3-208ENST00000564247 CNBD1Q8NA66 436 aa21.43■■□□□ 1.02
CMTM3-208ENST00000564247 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
CMTM3-208ENST00000564247 F6X3S4 739 aa21.42■■□□□ 1.02
CMTM3-208ENST00000564247 CCT4P50991 539 aaKnown RBP21.42■■□□□ 1.02
CMTM3-208ENST00000564247 HLFQ16534 295 aa21.42■■□□□ 1.02
CMTM3-208ENST00000564247 C20orf194Q5TEA3 1177 aa21.42■■□□□ 1.02
CMTM3-208ENST00000564247 MAP3K15Q6ZN16 1313 aa21.42■■□□□ 1.02
CMTM3-208ENST00000564247 BRIP1Q9BX63 1249 aa21.42■■□□□ 1.02
CMTM3-208ENST00000564247 PDZRN3Q9UPQ7 1066 aa21.42■■□□□ 1.02
CMTM3-208ENST00000564247 TNNQ9UQP3 1299 aa21.42■■□□□ 1.02
CMTM3-208ENST00000564247 ABCC4O15439 1325 aa21.41■■□□□ 1.02
CMTM3-208ENST00000564247 NEXNQ0ZGT2 675 aa21.41■■□□□ 1.02
CMTM3-208ENST00000564247 NIP7Q9Y221 180 aaKnown RBP eCLIP21.41■■□□□ 1.02
CMTM3-208ENST00000564247 H0YIN7 160 aa21.4■■□□□ 1.02
CMTM3-208ENST00000564247 PDE6BP35913 854 aa21.4■■□□□ 1.02
CMTM3-208ENST00000564247 C2CD5Q86YS7 1000 aa21.4■■□□□ 1.02
CMTM3-208ENST00000564247 TMEM57Q8N5G2 664 aa21.4■■□□□ 1.02
CMTM3-208ENST00000564247 CHMP4BQ9H444 224 aaKnown RBP21.4■■□□□ 1.02
CMTM3-208ENST00000564247 COG6Q9Y2V7 657 aa21.4■■□□□ 1.02
CMTM3-208ENST00000564247 NPHP1O15259 732 aa21.39■■□□□ 1.01
CMTM3-208ENST00000564247 RLBP1P12271 317 aa21.39■■□□□ 1.01
CMTM3-208ENST00000564247 ST5P78524 1137 aa21.39■■□□□ 1.01
CMTM3-208ENST00000564247 INTS3Q68E01 1043 aaKnown RBP21.39■■□□□ 1.01
CMTM3-208ENST00000564247 NBPF5PQ86XG9 351 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-208ENST00000564247 ITPRIPQ8IWB1 547 aa21.39■■□□□ 1.01
CMTM3-208ENST00000564247 METTL22Q9BUU2 404 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-208ENST00000564247 ZBTB3Q9H5J0 574 aa21.39■■□□□ 1.01
CMTM3-208ENST00000564247 ATP10DQ9P241 1426 aa21.38■■□□□ 1.01
CMTM3-208ENST00000564247 ADCY9O60503 1353 aa21.38■■□□□ 1.01
CMTM3-208ENST00000564247 MVPQ14764 893 aaKnown RBP21.38■■□□□ 1.01
CMTM3-208ENST00000564247 ARHGAP27Q6ZUM4 889 aa21.38■■□□□ 1.01
CMTM3-208ENST00000564247 CCDC24Q8N4L8 307 aa21.38■■□□□ 1.01
CMTM3-208ENST00000564247 CRBNQ96SW2 442 aa21.38■■□□□ 1.01
CMTM3-208ENST00000564247 SRCIN1Q9C0H9 1055 aa21.38■■□□□ 1.01
CMTM3-208ENST00000564247 DDX19BQ9UMR2 479 aa21.38■■□□□ 1.01
CMTM3-208ENST00000564247 COL11A2P13942 1736 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-208ENST00000564247 HSP90AB3PQ58FF7 597 aa21.37■■□□□ 1.01
CMTM3-208ENST00000564247 TPTE2Q6XPS3 522 aa21.37■■□□□ 1.01
CMTM3-208ENST00000564247 TTLL6Q8N841 843 aa21.36■■□□□ 1.01
CMTM3-208ENST00000564247 LINS1Q8NG48 757 aa21.36■■□□□ 1.01
CMTM3-208ENST00000564247 MYD88Q99836 296 aa21.36■■□□□ 1.01
CMTM3-208ENST00000564247 BEND3Q5T5X7 828 aa21.35■■□□□ 1.01
CMTM3-208ENST00000564247 ERICH6BQ5W0A0 696 aa21.35■■□□□ 1.01
CMTM3-208ENST00000564247 GIGYF2Q6Y7W6 1299 aaKnown RBP21.35■■□□□ 1.01
CMTM3-208ENST00000564247 ALDH1L1O75891 902 aa21.34■■□□□ 1.01
CMTM3-208ENST00000564247 TCIRG1Q13488 830 aa21.34■■□□□ 1.01
CMTM3-208ENST00000564247 AAMPQ13685 434 aa21.33■■□□□ 1.01
CMTM3-208ENST00000564247 ZNF34Q8IZ26 560 aa21.33■■□□□ 1.01
CMTM3-208ENST00000564247 EXOC6Q8TAG9 804 aa21.33■■□□□ 1.01
CMTM3-208ENST00000564247 NYXQ9GZU5 481 aa21.33■■□□□ 1.01
CMTM3-208ENST00000564247 IBTKQ9P2D0 1353 aaPredicted RBP21.33■■□□□ 1
CMTM3-208ENST00000564247 KLRG2A4D1S0 409 aaPredicted RBP21.32■■□□□ 1
CMTM3-208ENST00000564247 FAM177BA6PVY3 158 aa21.32■■□□□ 1
CMTM3-208ENST00000564247 SRGNP10124 158 aa21.32■■□□□ 1
CMTM3-208ENST00000564247 ZNF622Q969S3 477 aaKnown RBP eCLIP21.32■■□□□ 1
CMTM3-208ENST00000564247 UBN2Q6ZU65 1347 aa21.31■■□□□ 1
CMTM3-208ENST00000564247 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
CMTM3-208ENST00000564247 ARFGEF2Q9Y6D5 1785 aa21.31■■□□□ 1
CMTM3-208ENST00000564247 SBF1O95248 1867 aa21.31■■□□□ 1
CMTM3-208ENST00000564247 GPTP24298 496 aa21.31■■□□□ 1
CMTM3-208ENST00000564247 STYK1Q6J9G0 422 aa21.31■■□□□ 1
CMTM3-208ENST00000564247 ATP5J2-PTCD1G3V325 749 aa21.3■■□□□ 1
CMTM3-208ENST00000564247 ZBTB7BO15156 539 aaPredicted RBP21.3■■□□□ 1
CMTM3-208ENST00000564247 GTF2E1P29083 439 aaPredicted RBP21.3■■□□□ 1
CMTM3-208ENST00000564247 MASTLQ96GX5 879 aa21.3■■□□□ 1
CMTM3-208ENST00000564247 C9orf78Q9NZ63 289 aaPredicted RBP21.3■■□□□ 1
CMTM3-208ENST00000564247 CACNA1SQ13698 1873 aa21.29■■□□□ 1
CMTM3-208ENST00000564247 NEURL1BA8MQ27 555 aa21.29■■□□□ 1
CMTM3-208ENST00000564247 IGKV5-2P06315 115 aa21.29■■□□□ 1
CMTM3-208ENST00000564247 TRIM28Q13263 835 aaKnown RBP21.29■■□□□ 1
CMTM3-208ENST00000564247 CWF19L2Q2TBE0 894 aaKnown RBP21.29■■□□□ 1
CMTM3-208ENST00000564247 PARP10Q53GL7 1025 aa21.29■■□□□ 1
CMTM3-208ENST00000564247 CCDC191Q8NCU4 936 aa21.29■■□□□ 1
CMTM3-208ENST00000564247 CNKSR1Q969H4 720 aa21.29■■□□□ 1
CMTM3-208ENST00000564247 ISCA1Q9BUE6 129 aa21.29■■□□□ 1
CMTM3-208ENST00000564247 CWC25Q9NXE8 425 aaPredicted RBP21.29■■□□□ 1
CMTM3-208ENST00000564247 HDAC5Q9UQL6 1122 aa21.29■■□□□ 1
CMTM3-208ENST00000564247 SLX4Q8IY92 1834 aa21.28■■□□□ 1
CMTM3-208ENST00000564247 GNAI3P08754 354 aa21.28■■□□□ 1
CMTM3-208ENST00000564247 SUSD4Q5VX71 490 aa21.28■■□□□ 1
CMTM3-208ENST00000564247 RIC1Q4ADV7 1423 aa21.28■■□□□ 1
CMTM3-208ENST00000564247 NPR1P16066 1061 aa21.27■■□□□ 1
CMTM3-208ENST00000564247 PPP1R42Q7Z4L9 355 aa21.27■■□□□ 1
CMTM3-208ENST00000564247 NUTM1Q86Y26 1132 aa21.27■■□□□ 1
CMTM3-208ENST00000564247 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
CMTM3-208ENST00000564247 TNRC6CQ9HCJ0 1690 aaKnown RBP21.27■■□□□ 1
CMTM3-208ENST00000564247 ABCC12Q96J65 1359 aa21.26■□□□□ 0.99
CMTM3-208ENST00000564247 NTSR2O95665 410 aa21.26■□□□□ 0.99
CMTM3-208ENST00000564247 GCKRQ14397 625 aa21.26■□□□□ 0.99
CMTM3-208ENST00000564247 ERFEQ4G0M1 354 aa21.26■□□□□ 0.99
CMTM3-208ENST00000564247 C9orf131Q5VYM1 1079 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms