RNA–Protein interactions for RNA: ENST00000563597.5

PPP4C-206, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 3

Gene PPP4C, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-206	ENST00000563597	ANKRD36C	Q5JPF3	1778 aa		32.22	■■■□□ 2.75
PPP4C-206	ENST00000563597	CCDC93	Q567U6	631 aa		32.22	■■■□□ 2.75
PPP4C-206	ENST00000563597	RNF123	Q5XPI4	1314 aa		32.21	■■■□□ 2.75
PPP4C-206	ENST00000563597	DICER1	Q9UPY3	1922 aa	Known RBP	32.2	■■■□□ 2.75
PPP4C-206	ENST00000563597	UTP14A	Q9BVJ6	771 aa	Known RBP	32.2	■■■□□ 2.75
PPP4C-206	ENST00000563597	HYPK	Q9NX55	129 aa		32.2	■■■□□ 2.75
PPP4C-206	ENST00000563597	GLTPD2	A6NH11	291 aa		32.19	■■■□□ 2.74
PPP4C-206	ENST00000563597	CCDC27	Q2M243	656 aa		32.19	■■■□□ 2.74
PPP4C-206	ENST00000563597	RPGR	Q92834	1020 aa	Known RBP	32.19	■■■□□ 2.74
PPP4C-206	ENST00000563597	HOXA10	P31260	410 aa	Predicted RBP	32.18	■■■□□ 2.74
PPP4C-206	ENST00000563597	TCIRG1	Q13488	830 aa		32.18	■■■□□ 2.74
PPP4C-206	ENST00000563597	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.18	■■■□□ 2.74
PPP4C-206	ENST00000563597	CEP350	Q5VT06	3117 aa		32.18	■■■□□ 2.74
PPP4C-206	ENST00000563597	PLBD2	Q8NHP8	589 aa		32.17	■■■□□ 2.74
PPP4C-206	ENST00000563597	HSPA6	P17066	643 aa		32.16	■■■□□ 2.74
PPP4C-206	ENST00000563597	NLRP10	Q86W26	655 aa		32.16	■■■□□ 2.74
PPP4C-206	ENST00000563597	RTKN2	Q8IZC4	609 aa		32.16	■■■□□ 2.74
PPP4C-206	ENST00000563597	RRAGC	Q9HB90	399 aa		32.16	■■■□□ 2.74
PPP4C-206	ENST00000563597	NCBP3	Q53F19	620 aa	Known RBP	32.15	■■■□□ 2.74
PPP4C-206	ENST00000563597	SLC10A5	Q5PT55	438 aa		32.15	■■■□□ 2.74
PPP4C-206	ENST00000563597	ANKRD13D	Q6ZTN6	518 aa		32.15	■■■□□ 2.74
PPP4C-206	ENST00000563597	NLRP3	Q96P20	1036 aa		32.15	■■■□□ 2.74
PPP4C-206	ENST00000563597	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.14	■■■□□ 2.74
PPP4C-206	ENST00000563597	DPY19L2	Q6NUT2	758 aa		32.14	■■■□□ 2.74
PPP4C-206	ENST00000563597	CHMP4A	Q9BY43	222 aa		32.14	■■■□□ 2.74
PPP4C-206	ENST00000563597	RBM46	Q8TBY0	533 aa	Known RBP	32.13	■■■□□ 2.73
PPP4C-206	ENST00000563597	RBM17	Q96I25	401 aa	Known RBP	32.13	■■■□□ 2.73
PPP4C-206	ENST00000563597	CRAMP1	Q96RY5	1269 aa		32.13	■■■□□ 2.73
PPP4C-206	ENST00000563597	ELL2	O00472	640 aa	Predicted RBP	32.12	■■■□□ 2.73
PPP4C-206	ENST00000563597	CC2D2B	Q6DHV5	1058 aa		32.12	■■■□□ 2.73
PPP4C-206	ENST00000563597	WWC1	Q8IX03	1113 aa		32.12	■■■□□ 2.73
PPP4C-206	ENST00000563597	OLFM4	Q6UX06	510 aa		32.11	■■■□□ 2.73
PPP4C-206	ENST00000563597	C8orf58	Q8NAV2	365 aa		32.11	■■■□□ 2.73
PPP4C-206	ENST00000563597	TRMT112	Q9UI30	125 aa	Known RBP	32.11	■■■□□ 2.73
PPP4C-206	ENST00000563597	C3orf67	Q6ZVT6	689 aa		32.1	■■■□□ 2.73
PPP4C-206	ENST00000563597	SH3TC1	Q8TE82	1336 aa		32.09	■■■□□ 2.73
PPP4C-206	ENST00000563597	VEGFA	P15692	232 aa	Predicted RBP	32.09	■■■□□ 2.73
PPP4C-206	ENST00000563597	SNED1	Q8TER0	1413 aa		32.08	■■■□□ 2.73
PPP4C-206	ENST00000563597	IL16	Q14005	1332 aa		32.07	■■■□□ 2.72
PPP4C-206	ENST00000563597	GRIPAP1	Q4V328	841 aa		32.07	■■■□□ 2.72
PPP4C-206	ENST00000563597	PSMD1	Q99460	953 aa		32.07	■■■□□ 2.72
PPP4C-206	ENST00000563597	ISCA1	Q9BUE6	129 aa		32.07	■■■□□ 2.72
PPP4C-206	ENST00000563597	WDR90	Q96KV7	1748 aa		32.06	■■■□□ 2.72
PPP4C-206	ENST00000563597	GOLGA2	Q08379	1002 aa		32.06	■■■□□ 2.72
PPP4C-206	ENST00000563597	FSTL1	Q12841	308 aa		32.06	■■■□□ 2.72
PPP4C-206	ENST00000563597	CCDC30	Q5VVM6	783 aa		32.06	■■■□□ 2.72
PPP4C-206	ENST00000563597	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.06	■■■□□ 2.72
PPP4C-206	ENST00000563597	PPEF1	O14829	653 aa	Predicted RBP	32.05	■■■□□ 2.72
PPP4C-206	ENST00000563597	TSR2	Q969E8	191 aa	Known RBP	32.05	■■■□□ 2.72
PPP4C-206	ENST00000563597	HCLS1	P14317	486 aa	Predicted RBP	32.04	■■■□□ 2.72
PPP4C-206	ENST00000563597	SYNE4	Q8N205	404 aa		32.04	■■■□□ 2.72
PPP4C-206	ENST00000563597	TRIM28	Q13263	835 aa	Known RBP	32.03	■■■□□ 2.72
PPP4C-206	ENST00000563597	RIC3	Q7Z5B4	369 aa		32.03	■■■□□ 2.72
PPP4C-206	ENST00000563597	PHAX	Q9H814	394 aa	Known RBP	32.03	■■■□□ 2.72
PPP4C-206	ENST00000563597	LAMB2	P55268	1798 aa		32.03	■■■□□ 2.72
PPP4C-206	ENST00000563597	IARS	P41252	1262 aa	Known RBP	32.02	■■■□□ 2.72
PPP4C-206	ENST00000563597	TSPYL6	Q8N831	410 aa		32.02	■■■□□ 2.72
PPP4C-206	ENST00000563597	ATP5J2-PTCD1	G3V325	749 aa		32.01	■■■□□ 2.71
PPP4C-206	ENST00000563597	TMX4	Q9H1E5	349 aa	Predicted RBP	32.01	■■■□□ 2.71
PPP4C-206	ENST00000563597	ABCC4	O15439	1325 aa		32	■■■□□ 2.71
PPP4C-206	ENST00000563597	POTEC	B2RU33	542 aa		32	■■■□□ 2.71
PPP4C-206	ENST00000563597	APLP1	P51693	650 aa		32	■■■□□ 2.71
PPP4C-206	ENST00000563597	SMC1B	Q8NDV3	1235 aa		32	■■■□□ 2.71
PPP4C-206	ENST00000563597	DDN	O94850	711 aa	Predicted RBP	31.99	■■■□□ 2.71
PPP4C-206	ENST00000563597	ATP6V0A2	Q9Y487	856 aa		31.99	■■■□□ 2.71
PPP4C-206	ENST00000563597	BBOX1	O75936	387 aa		31.98	■■■□□ 2.71
PPP4C-206	ENST00000563597	DDX58	O95786	925 aa	Known RBP	31.98	■■■□□ 2.71
PPP4C-206	ENST00000563597	DDX46	Q7L014	1031 aa	Known RBP	31.98	■■■□□ 2.71
PPP4C-206	ENST00000563597	FAM89A	Q96GI7	184 aa		31.98	■■■□□ 2.71
PPP4C-206	ENST00000563597	TCERG1	O14776	1098 aa	Known RBP	31.97	■■■□□ 2.71
PPP4C-206	ENST00000563597	TWISTNB	Q3B726	338 aa	Predicted RBP	31.97	■■■□□ 2.71
PPP4C-206	ENST00000563597	WDR63	Q8IWG1	891 aa		31.97	■■■□□ 2.71
PPP4C-206	ENST00000563597	DDX60	Q8IY21	1712 aa	Known RBP	31.96	■■■□□ 2.71
PPP4C-206	ENST00000563597	JDP2	Q8WYK2	163 aa		31.96	■■■□□ 2.71
PPP4C-206	ENST00000563597	ZNF428	Q96B54	188 aa		31.96	■■■□□ 2.71
PPP4C-206	ENST00000563597	STK31	Q9BXU1	1019 aa		31.96	■■■□□ 2.71
PPP4C-206	ENST00000563597	FZD9	O00144	591 aa		31.94	■■■□□ 2.7
PPP4C-206	ENST00000563597	GRAP	Q13588	217 aa		31.94	■■■□□ 2.7
PPP4C-206	ENST00000563597	FAM9B	Q8IZU0	186 aa		31.94	■■■□□ 2.7
PPP4C-206	ENST00000563597	GRAPL	Q8TC17	118 aa	Predicted RBP	31.94	■■■□□ 2.7
PPP4C-206	ENST00000563597	L3MBTL3	Q96JM7	780 aa	Predicted RBP	31.94	■■■□□ 2.7
PPP4C-206	ENST00000563597	SALL2	Q9Y467	1007 aa	Predicted RBP	31.94	■■■□□ 2.7
PPP4C-206	ENST00000563597	IQCA1L	A6NCM1	817 aa		31.93	■■■□□ 2.7
PPP4C-206	ENST00000563597	SP8	Q8IXZ3	490 aa		31.93	■■■□□ 2.7
PPP4C-206	ENST00000563597	CCDC191	Q8NCU4	936 aa		31.93	■■■□□ 2.7
PPP4C-206	ENST00000563597	MYD88	Q99836	296 aa		31.93	■■■□□ 2.7
PPP4C-206	ENST00000563597	ZNF541	Q9H0D2	1346 aa		31.93	■■■□□ 2.7
PPP4C-206	ENST00000563597	FANCI	Q9NVI1	1328 aa		31.93	■■■□□ 2.7
PPP4C-206	ENST00000563597	SF3B3	Q15393	1217 aa	Known RBP	31.92	■■■□□ 2.7
PPP4C-206	ENST00000563597	SLC51A	Q86UW1	340 aa		31.92	■■■□□ 2.7
PPP4C-206	ENST00000563597	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.92	■■■□□ 2.7
PPP4C-206	ENST00000563597	IRS4	O14654	1257 aa	Predicted RBP	31.91	■■■□□ 2.7
PPP4C-206	ENST00000563597	HSP90B1	P14625	803 aa	Known RBP	31.91	■■■□□ 2.7
PPP4C-206	ENST00000563597	TMC4	Q7Z404	712 aa		31.91	■■■□□ 2.7
PPP4C-206	ENST00000563597	METTL22	Q9BUU2	404 aa	Predicted RBP	31.91	■■■□□ 2.7
PPP4C-206	ENST00000563597	RTL5	Q5HYW3	569 aa	Predicted RBP	31.9	■■■□□ 2.7
PPP4C-206	ENST00000563597	LARGE2	Q8N3Y3	721 aa		31.9	■■■□□ 2.7
PPP4C-206	ENST00000563597	VPS33B	Q9H267	617 aa		31.9	■■■□□ 2.7
PPP4C-206	ENST00000563597	SCN4A	P35499	1836 aa		31.9	■■■□□ 2.7
PPP4C-206	ENST00000563597	SUPT20H	Q8NEM7	779 aa		31.89	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms