RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 ZNF395Q9H8N7 513 aaPredicted RBP10.51□□□□□ -0.73
KARS-203ENST00000562875 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
KARS-203ENST00000562875 USTQ9Y2C2 406 aa10.51□□□□□ -0.73
KARS-203ENST00000562875 TRPM2O94759 1503 aa10.51□□□□□ -0.73
KARS-203ENST00000562875 RNF123Q5XPI4 1314 aa10.51□□□□□ -0.73
KARS-203ENST00000562875 PARD3Q8TEW0 1356 aa10.51□□□□□ -0.73
KARS-203ENST00000562875 CARNS1A5YM72 827 aa10.5□□□□□ -0.73
KARS-203ENST00000562875 MEN1O00255 615 aa10.5□□□□□ -0.73
KARS-203ENST00000562875 WASLO00401 505 aaPredicted RBP10.5□□□□□ -0.73
KARS-203ENST00000562875 AXIN1O15169 862 aa10.5□□□□□ -0.73
KARS-203ENST00000562875 UPP2O95045 317 aa10.5□□□□□ -0.73
KARS-203ENST00000562875 SMCPP49901 116 aaPredicted RBP10.5□□□□□ -0.73
KARS-203ENST00000562875 LINC00528Q8N1L1 170 aa10.5□□□□□ -0.73
KARS-203ENST00000562875 NEURL4Q96JN8 1562 aa10.5□□□□□ -0.73
KARS-203ENST00000562875 EIF3AQ14152 1382 aaKnown RBP10.5□□□□□ -0.73
KARS-203ENST00000562875 PLCH2O75038 1416 aa10.5□□□□□ -0.73
KARS-203ENST00000562875 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
KARS-203ENST00000562875 IL2RAP01589 272 aa10.49□□□□□ -0.73
KARS-203ENST00000562875 EFCAB2Q5VUJ9 269 aa10.49□□□□□ -0.73
KARS-203ENST00000562875 CNKSR1Q969H4 720 aa10.49□□□□□ -0.73
KARS-203ENST00000562875 KANK1Q14678 1352 aa10.49□□□□□ -0.73
KARS-203ENST00000562875 RTEL1-TNFRSF6BF6WH68 1400 aa10.49□□□□□ -0.73
KARS-203ENST00000562875 CFAP74Q9C0B2 1584 aa10.48□□□□□ -0.73
KARS-203ENST00000562875 BACH1O14867 736 aa10.48□□□□□ -0.73
KARS-203ENST00000562875 PDE4CQ08493 712 aa10.48□□□□□ -0.73
KARS-203ENST00000562875 CLN3Q13286 438 aa10.48□□□□□ -0.73
KARS-203ENST00000562875 C6orf118Q5T5N4 469 aa10.48□□□□□ -0.73
KARS-203ENST00000562875 MRPL14Q6P1L8 145 aaKnown RBP10.48□□□□□ -0.73
KARS-203ENST00000562875 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
KARS-203ENST00000562875 NLRP3Q96P20 1036 aa10.48□□□□□ -0.73
KARS-203ENST00000562875 CLASP1Q7Z460 1538 aa10.48□□□□□ -0.73
KARS-203ENST00000562875 M0R2N6 131 aa10.47□□□□□ -0.73
KARS-203ENST00000562875 BMP2P12643 396 aa10.47□□□□□ -0.73
KARS-203ENST00000562875 BMP1P13497 986 aa10.47□□□□□ -0.73
KARS-203ENST00000562875 CRIPAKQ8N1N5 446 aa10.47□□□□□ -0.73
KARS-203ENST00000562875 TSEN2Q8NCE0 465 aaKnown RBP10.47□□□□□ -0.73
KARS-203ENST00000562875 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
KARS-203ENST00000562875 ZFYVE16Q7Z3T8 1539 aa10.47□□□□□ -0.73
KARS-203ENST00000562875 INO80Q9ULG1 1556 aaPredicted RBP10.47□□□□□ -0.73
KARS-203ENST00000562875 ABCA9Q8IUA7 1624 aa10.47□□□□□ -0.73
KARS-203ENST00000562875 ST8SIA5O15466 376 aa10.46□□□□□ -0.73
KARS-203ENST00000562875 PDIA4P13667 645 aaKnown RBP10.46□□□□□ -0.73
KARS-203ENST00000562875 RRP1P56182 461 aaKnown RBP10.46□□□□□ -0.73
KARS-203ENST00000562875 FAM69CQ0P6D2 419 aa10.46□□□□□ -0.73
KARS-203ENST00000562875 RGL3Q3MIN7 710 aa10.46□□□□□ -0.73
KARS-203ENST00000562875 INSM2Q96T92 566 aaPredicted RBP10.46□□□□□ -0.73
KARS-203ENST00000562875 HINFPQ9BQA5 517 aa10.46□□□□□ -0.73
KARS-203ENST00000562875 BLMP54132 1417 aaPredicted RBP10.46□□□□□ -0.74
KARS-203ENST00000562875 CLTCL1P53675 1640 aa10.46□□□□□ -0.74
KARS-203ENST00000562875 IFT172Q9UG01 1749 aa10.46□□□□□ -0.74
KARS-203ENST00000562875 ATP7AQ04656 1500 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 WDR7Q9Y4E6 1490 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 SPINT1O43278 529 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 LGR5O75473 907 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 SCARF1Q14162 830 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 TLR1Q15399 786 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 SWI5Q1ZZU3 235 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 TRIM46Q7Z4K8 759 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 SLC4A9Q96Q91 983 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
KARS-203ENST00000562875 AAASQ9NRG9 546 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 RCAN3Q9UKA8 241 aa10.45□□□□□ -0.74
KARS-203ENST00000562875 SMTNP53814 917 aa10.44□□□□□ -0.74
KARS-203ENST00000562875 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
KARS-203ENST00000562875 POLMQ9NP87 494 aaPredicted RBP10.44□□□□□ -0.74
KARS-203ENST00000562875 NOP58Q9Y2X3 529 aaKnown RBP10.44□□□□□ -0.74
KARS-203ENST00000562875 HRH3Q9Y5N1 445 aa10.44□□□□□ -0.74
KARS-203ENST00000562875 MYOM1P52179 1685 aa10.44□□□□□ -0.74
KARS-203ENST00000562875 SCAF11Q99590 1463 aaKnown RBP10.43□□□□□ -0.74
KARS-203ENST00000562875 SCAPERQ9BY12 1400 aa10.43□□□□□ -0.74
KARS-203ENST00000562875 TCERG1O14776 1098 aaKnown RBP10.43□□□□□ -0.74
KARS-203ENST00000562875 CENPCQ03188 943 aa10.43□□□□□ -0.74
KARS-203ENST00000562875 CLP1Q92989 425 aaKnown RBP10.43□□□□□ -0.74
KARS-203ENST00000562875 PLA2R1Q13018 1463 aa10.42□□□□□ -0.74
KARS-203ENST00000562875 SPAG9O60271 1321 aaKnown RBP10.42□□□□□ -0.74
KARS-203ENST00000562875 A6NJY4 79 aa10.42□□□□□ -0.74
KARS-203ENST00000562875 CTSOP43234 321 aaPredicted RBP10.42□□□□□ -0.74
KARS-203ENST00000562875 WDR43Q15061 677 aaKnown RBP eCLIP10.42□□□□□ -0.74
KARS-203ENST00000562875 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.42□□□□□ -0.74
KARS-203ENST00000562875 TRAIPQ9BWF2 469 aa10.42□□□□□ -0.74
KARS-203ENST00000562875 MAP3K4Q9Y6R4 1608 aa10.42□□□□□ -0.74
KARS-203ENST00000562875 ERCC6L2Q5T890 1561 aa10.42□□□□□ -0.74
KARS-203ENST00000562875 ASXL1Q8IXJ9 1541 aa10.42□□□□□ -0.74
KARS-203ENST00000562875 MYO3AQ8NEV4 1616 aa10.41□□□□□ -0.74
KARS-203ENST00000562875 PRMT3O60678 531 aa10.41□□□□□ -0.74
KARS-203ENST00000562875 EPHA4P54764 986 aa10.41□□□□□ -0.74
KARS-203ENST00000562875 MTFR1Q15390 333 aa10.41□□□□□ -0.74
KARS-203ENST00000562875 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
KARS-203ENST00000562875 SLAIN2Q9P270 581 aa10.41□□□□□ -0.74
KARS-203ENST00000562875 KNSTRNQ9Y448 316 aa10.41□□□□□ -0.74
KARS-203ENST00000562875 DISP3Q9P2K9 1392 aa10.4□□□□□ -0.74
KARS-203ENST00000562875 VIRMAQ69YN4 1812 aaKnown RBP10.4□□□□□ -0.74
KARS-203ENST00000562875 GPC1P35052 558 aa10.4□□□□□ -0.74
KARS-203ENST00000562875 SLC27A3Q5K4L6 730 aa10.4□□□□□ -0.74
KARS-203ENST00000562875 FOXD4L5Q5VV16 416 aaPredicted RBP10.4□□□□□ -0.74
KARS-203ENST00000562875 Q6ZNB5 142 aa10.4□□□□□ -0.74
KARS-203ENST00000562875 PRIMPOLQ96LW4 560 aa10.4□□□□□ -0.74
KARS-203ENST00000562875 ZFP42Q96MM3 310 aa10.4□□□□□ -0.74
KARS-203ENST00000562875 ATP13A2Q9NQ11 1180 aa10.4□□□□□ -0.74
KARS-203ENST00000562875 DACH1Q9UI36 760 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms