RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 FNDC3AQ9Y2H6 1198 aaKnown RBP5.53□□□□□ -1.52
CHD9-207ENST00000562806 INPP5BP32019 993 aa5.52□□□□□ -1.53
CHD9-207ENST00000562806 KRT76Q01546 638 aa5.52□□□□□ -1.53
CHD9-207ENST00000562806 FKBP4Q02790 459 aaKnown RBP eCLIP5.52□□□□□ -1.53
CHD9-207ENST00000562806 KCNA1Q09470 495 aa5.52□□□□□ -1.53
CHD9-207ENST00000562806 PCSK7Q16549 785 aa5.52□□□□□ -1.53
CHD9-207ENST00000562806 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
CHD9-207ENST00000562806 ZNF468Q5VIY5 522 aaPredicted RBP5.52□□□□□ -1.53
CHD9-207ENST00000562806 TREML1Q86YW5 311 aa5.52□□□□□ -1.53
CHD9-207ENST00000562806 GTF3C2Q8WUA4 911 aaPredicted RBP5.52□□□□□ -1.53
CHD9-207ENST00000562806 KLRG1Q96E93 195 aa5.52□□□□□ -1.53
CHD9-207ENST00000562806 PNMA5Q96PV4 448 aa5.52□□□□□ -1.53
CHD9-207ENST00000562806 BCS1LQ9Y276 419 aa5.52□□□□□ -1.53
CHD9-207ENST00000562806 SIN3BO75182 1162 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 BCRP11274 1271 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 PDIA4P13667 645 aaKnown RBP5.51□□□□□ -1.53
CHD9-207ENST00000562806 NPR3P17342 541 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 CD33P20138 364 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 CTBSQ01459 385 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 SPEM2Q0P670 501 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 CCINQ13939 588 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 NOM1Q5C9Z4 860 aaKnown RBP5.51□□□□□ -1.53
CHD9-207ENST00000562806 PHLDB3Q6NSJ2 640 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 SLCO4C1Q6ZQN7 724 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 TTC16Q8NEE8 873 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 SAP130Q9H0E3 1048 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 STK17AQ9UEE5 414 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 SEPT3Q9UH03 358 aa5.51□□□□□ -1.53
CHD9-207ENST00000562806 PIK3R2O00459 728 aa5.5□□□□□ -1.53
CHD9-207ENST00000562806 TNFRSF10BO14763 440 aa5.5□□□□□ -1.53
CHD9-207ENST00000562806 EGFRP00533 1210 aa5.5□□□□□ -1.53
CHD9-207ENST00000562806 ALAS2P22557 587 aa5.5□□□□□ -1.53
CHD9-207ENST00000562806 USP5P45974 858 aa5.5□□□□□ -1.53
CHD9-207ENST00000562806 SFSWAPQ12872 951 aaKnown RBP5.5□□□□□ -1.53
CHD9-207ENST00000562806 SVOPQ8N4V2 548 aa5.5□□□□□ -1.53
CHD9-207ENST00000562806 GNEQ9Y223 722 aaKnown RBP5.5□□□□□ -1.53
CHD9-207ENST00000562806 OPLAHO14841 1288 aa5.49□□□□□ -1.53
CHD9-207ENST00000562806 OIP5O43482 229 aa5.49□□□□□ -1.53
CHD9-207ENST00000562806 CELA2BP08218 269 aaPredicted RBP5.49□□□□□ -1.53
CHD9-207ENST00000562806 ZAP70P43403 619 aa5.49□□□□□ -1.53
CHD9-207ENST00000562806 TXNDC2Q86VQ3 553 aa5.49□□□□□ -1.53
CHD9-207ENST00000562806 ETFBKMTQ8IXQ9 262 aa5.49□□□□□ -1.53
CHD9-207ENST00000562806 KCTD17Q8N5Z5 321 aa5.49□□□□□ -1.53
CHD9-207ENST00000562806 ACDQ96AP0 544 aa5.49□□□□□ -1.53
CHD9-207ENST00000562806 STRN4Q9NRL3 753 aa5.49□□□□□ -1.53
CHD9-207ENST00000562806 RTCBQ9Y3I0 505 aaKnown RBP5.49□□□□□ -1.53
CHD9-207ENST00000562806 ADARB2-AS1A8MUL3 147 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 C2CD2LO14523 706 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 ICMTO60725 284 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 MAP3K6O95382 1288 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 ABL1P00519 1130 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 EHHADHQ08426 723 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 ZNF385CQ66K41 422 aaPredicted RBP5.48□□□□□ -1.53
CHD9-207ENST00000562806 CAPN12Q6ZSI9 719 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 SYT9Q86SS6 491 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 EDARADDQ8WWZ3 215 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 TNFRSF25Q93038 417 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 GSX2Q9BZM3 304 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 GGA1Q9UJY5 639 aa5.48□□□□□ -1.53
CHD9-207ENST00000562806 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.48□□□□□ -1.53
CHD9-207ENST00000562806 DNMT3AQ9Y6K1 912 aaPredicted RBP5.48□□□□□ -1.53
CHD9-207ENST00000562806 ELOA3CA0A087WX78 387 aaPredicted RBP5.47□□□□□ -1.53
CHD9-207ENST00000562806 CARNS1A5YM72 827 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 ELOA3DA6NLF2 546 aaPredicted RBP5.47□□□□□ -1.53
CHD9-207ENST00000562806 XYLBO75191 536 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 MZF1P28698 734 aaPredicted RBP5.47□□□□□ -1.53
CHD9-207ENST00000562806 AAMPQ13685 434 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 ELOA3BQ3SY89 546 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 KANK3Q6NY19 840 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 LYPD4Q6UWN0 246 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 GLYCTKQ8IVS8 523 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 RGL4Q8IZJ4 473 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 CMTR1Q8N1G2 835 aaKnown RBP5.47□□□□□ -1.53
CHD9-207ENST00000562806 GALNT6Q8NCL4 622 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 ELOA3Q8NG57 546 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 NEDD1Q8NHV4 660 aa5.47□□□□□ -1.53
CHD9-207ENST00000562806 NEURL1BA8MQ27 555 aa5.46□□□□□ -1.54
CHD9-207ENST00000562806 RNF225M0QZC1 329 aaPredicted RBP5.46□□□□□ -1.54
CHD9-207ENST00000562806 EPXP11678 715 aa5.46□□□□□ -1.54
CHD9-207ENST00000562806 EIF1AXP47813 144 aaKnown RBP5.46□□□□□ -1.54
CHD9-207ENST00000562806 MARSP56192 900 aaKnown RBP5.46□□□□□ -1.54
CHD9-207ENST00000562806 PDE12Q6L8Q7 609 aaKnown RBP5.46□□□□□ -1.54
CHD9-207ENST00000562806 NLRP13Q86W25 1043 aa5.46□□□□□ -1.54
CHD9-207ENST00000562806 BHMTQ93088 406 aa5.46□□□□□ -1.54
CHD9-207ENST00000562806 SCARF2Q96GP6 870 aaPredicted RBP5.46□□□□□ -1.54
CHD9-207ENST00000562806 CITED4Q96RK1 184 aa5.46□□□□□ -1.54
CHD9-207ENST00000562806 SLC30A3Q99726 388 aa5.46□□□□□ -1.54
CHD9-207ENST00000562806 UBAP1LF5GYI3 381 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 ARHGEF15O94989 841 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 NEFLP07196 543 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 RARAP10276 462 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 MPSTP25325 297 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 PCBP4P57723 403 aaKnown RBP5.45□□□□□ -1.54
CHD9-207ENST00000562806 XKR5Q6UX68 686 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 PODNQ7Z5L7 613 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 BEND7Q8N7W2 519 aaPredicted RBP5.45□□□□□ -1.54
CHD9-207ENST00000562806 GPR152Q8TDT2 470 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 PMEPA1Q969W9 287 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 KCNMB2Q9Y691 235 aa5.45□□□□□ -1.54
CHD9-207ENST00000562806 PHF20L1A8MW92 1017 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms