RNA–Protein interactions for RNA: ENST00000562801.5

GPT2-204, Transcript of glutamic--pyruvic transaminase 2, human

TSL 2

Gene GPT2, Length 2,092 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPT2-204	ENST00000562801	RFX5	P48382	616 aa	Predicted RBP	18.83	■□□□□ 0.6
GPT2-204	ENST00000562801	DZIP3	Q86Y13	1208 aa	Known RBP	18.83	■□□□□ 0.6
GPT2-204	ENST00000562801	TBC1D2B	Q9UPU7	963 aa		18.83	■□□□□ 0.6
GPT2-204	ENST00000562801	NUP98	P52948	1817 aa		18.82	■□□□□ 0.6
GPT2-204	ENST00000562801	SBF2	Q86WG5	1849 aa		18.82	■□□□□ 0.6
GPT2-204	ENST00000562801	TBC1D9	Q6ZT07	1266 aa		18.82	■□□□□ 0.6
GPT2-204	ENST00000562801	NUTM1	Q86Y26	1132 aa		18.82	■□□□□ 0.6
GPT2-204	ENST00000562801	IPO9	Q96P70	1041 aa	Known RBP	18.82	■□□□□ 0.6
GPT2-204	ENST00000562801	SDS	P20132	328 aa		18.81	■□□□□ 0.6
GPT2-204	ENST00000562801	MFAP1	P55081	439 aa	Known RBP	18.81	■□□□□ 0.6
GPT2-204	ENST00000562801	KCNQ4	P56696	695 aa		18.81	■□□□□ 0.6
GPT2-204	ENST00000562801	LINC00116	Q8NCU8	138 aa		18.81	■□□□□ 0.6
GPT2-204	ENST00000562801	STAP2	Q9UGK3	403 aa		18.81	■□□□□ 0.6
GPT2-204	ENST00000562801	GPT	P24298	496 aa		18.81	■□□□□ 0.6
GPT2-204	ENST00000562801	SIL1	Q9H173	461 aa		18.81	■□□□□ 0.6
GPT2-204	ENST00000562801	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.81	■□□□□ 0.6
GPT2-204	ENST00000562801	ERVV-1	B6SEH8	477 aa		18.8	■□□□□ 0.6
GPT2-204	ENST00000562801	CDC45	O75419	566 aa		18.8	■□□□□ 0.6
GPT2-204	ENST00000562801	SASH1	O94885	1247 aa		18.8	■□□□□ 0.6
GPT2-204	ENST00000562801	LMBR1L	Q6UX01	489 aa		18.8	■□□□□ 0.6
GPT2-204	ENST00000562801	ERC1	Q8IUD2	1116 aa		18.8	■□□□□ 0.6
GPT2-204	ENST00000562801	PTPN12	Q05209	780 aa	Known RBP	18.8	■□□□□ 0.6
GPT2-204	ENST00000562801	TBC1D32	Q96NH3	1257 aa		18.8	■□□□□ 0.6
GPT2-204	ENST00000562801	COPRS	Q9NQ92	184 aa		18.8	■□□□□ 0.6
GPT2-204	ENST00000562801	HSP90AB3P	Q58FF7	597 aa		18.79	■□□□□ 0.6
GPT2-204	ENST00000562801	NLRP10	Q86W26	655 aa		18.79	■□□□□ 0.6
GPT2-204	ENST00000562801	AOX1	Q06278	1338 aa		18.78	■□□□□ 0.6
GPT2-204	ENST00000562801	PCCA	P05165	728 aa	Predicted RBP	18.78	■□□□□ 0.6
GPT2-204	ENST00000562801	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.78	■□□□□ 0.6	6e-9	■■■□□ 16.2
GPT2-204	ENST00000562801	UPF2	Q9HAU5	1272 aa	Known RBP	18.78	■□□□□ 0.6
GPT2-204	ENST00000562801	UBN2	Q6ZU65	1347 aa		18.77	■□□□□ 0.6
GPT2-204	ENST00000562801	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.77	■□□□□ 0.6
GPT2-204	ENST00000562801	FAM89A	Q96GI7	184 aa		18.77	■□□□□ 0.6
GPT2-204	ENST00000562801	CAMTA2	O94983	1202 aa		18.77	■□□□□ 0.59
GPT2-204	ENST00000562801	CLASRP	Q8N2M8	674 aa	Known RBP	18.77	■□□□□ 0.59
GPT2-204	ENST00000562801	CHMP3	Q9Y3E7	222 aa		18.77	■□□□□ 0.59
GPT2-204	ENST00000562801	BRWD3	Q6RI45	1802 aa		18.76	■□□□□ 0.59
GPT2-204	ENST00000562801	LY75	O60449	1722 aa		18.76	■□□□□ 0.59
GPT2-204	ENST00000562801	ZNF34	Q8IZ26	560 aa		18.76	■□□□□ 0.59
GPT2-204	ENST00000562801	SYNE4	Q8N205	404 aa		18.76	■□□□□ 0.59
GPT2-204	ENST00000562801	PI4K2B	Q8TCG2	481 aa		18.76	■□□□□ 0.59
GPT2-204	ENST00000562801	CNTNAP4	Q9C0A0	1308 aa		18.76	■□□□□ 0.59
GPT2-204	ENST00000562801	USP42	Q9H9J4	1324 aa	Known RBP	18.76	■□□□□ 0.59
GPT2-204	ENST00000562801	BCOR	Q6W2J9	1755 aa		18.75	■□□□□ 0.59
GPT2-204	ENST00000562801	PLA2G12B	Q9BX93	195 aa		18.75	■□□□□ 0.59
GPT2-204	ENST00000562801	CDHR2	Q9BYE9	1310 aa		18.74	■□□□□ 0.59
GPT2-204	ENST00000562801	AACS	Q86V21	672 aa		18.74	■□□□□ 0.59
GPT2-204	ENST00000562801	EAF2	Q96CJ1	260 aa	Predicted RBP	18.74	■□□□□ 0.59
GPT2-204	ENST00000562801	C22orf23	Q9BZE7	217 aa		18.73	■□□□□ 0.59
GPT2-204	ENST00000562801	CCNL1	Q9UK58	526 aa	Predicted RBP	18.73	■□□□□ 0.59
GPT2-204	ENST00000562801	IFIT2	P09913	472 aa	Known RBP	18.72	■□□□□ 0.59
GPT2-204	ENST00000562801	DDRGK1	Q96HY6	314 aa		18.72	■□□□□ 0.59
GPT2-204	ENST00000562801	TLR7	Q9NYK1	1049 aa	Known RBP	18.72	■□□□□ 0.59
GPT2-204	ENST00000562801	TTC41P	Q6P2S7	1318 aa		18.72	■□□□□ 0.59
GPT2-204	ENST00000562801	TAF1L	Q8IZX4	1826 aa		18.72	■□□□□ 0.59
GPT2-204	ENST00000562801	SMIM5	Q71RC9	77 aa		18.72	■□□□□ 0.59
GPT2-204	ENST00000562801	TRMT112	Q9UI30	125 aa	Known RBP	18.72	■□□□□ 0.59
GPT2-204	ENST00000562801	TFCP2	Q12800	502 aa		18.71	■□□□□ 0.59
GPT2-204	ENST00000562801	ZNF594	Q96JF6	807 aa	Predicted RBP	18.71	■□□□□ 0.59
GPT2-204	ENST00000562801	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.71	■□□□□ 0.59
GPT2-204	ENST00000562801	SCN7A	Q01118	1682 aa		18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	TRIM6-TRIM34	B2RNG4	842 aa		18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	CSF1R	P07333	972 aa		18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	ATG9A	Q7Z3C6	839 aa		18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	KRT27	Q7Z3Y8	459 aa		18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	RILPL2	Q969X0	211 aa		18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	MAP4K4	O95819	1239 aa	Predicted RBP	18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	RC3H1	Q5TC82	1133 aa	Known RBP	18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	SUSD4	Q5VX71	490 aa		18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	ECHDC1	Q9NTX5	307 aa		18.7	■□□□□ 0.58
GPT2-204	ENST00000562801	MYH3	P11055	1940 aa		18.69	■□□□□ 0.58
GPT2-204	ENST00000562801	IRS4	O14654	1257 aa	Predicted RBP	18.69	■□□□□ 0.58
GPT2-204	ENST00000562801	LRRC24	Q50LG9	513 aa		18.69	■□□□□ 0.58
GPT2-204	ENST00000562801	TNNI3K	Q59H18	835 aa		18.69	■□□□□ 0.58
GPT2-204	ENST00000562801	FPGT-TNNI3K	V9GXZ4	949 aa		18.69	■□□□□ 0.58
GPT2-204	ENST00000562801	AK9	Q5TCS8	1911 aa		18.68	■□□□□ 0.58
GPT2-204	ENST00000562801	GLRX3	O76003	335 aa	Known RBP	18.68	■□□□□ 0.58
GPT2-204	ENST00000562801	RBM25	P49756	843 aa	Known RBP	18.68	■□□□□ 0.58
GPT2-204	ENST00000562801	CTSW	P56202	376 aa		18.68	■□□□□ 0.58
GPT2-204	ENST00000562801	CASC1	Q6TDU7	716 aa		18.68	■□□□□ 0.58
GPT2-204	ENST00000562801	C4B	P0C0L5	1744 aa		18.68	■□□□□ 0.58
GPT2-204	ENST00000562801	EYA2	O00167	538 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	CCDC57	Q2TAC2	916 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	ZNF772	Q68DY9	489 aa	Predicted RBP	18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	FAM196A	Q6ZSG2	479 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	AMIGO3	Q86WK7	504 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	TTLL11	Q8NHH1	800 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	GPATCH3	Q96I76	525 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	PUS3	Q9BZE2	481 aa	Known RBP	18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	NIP7	Q9Y221	180 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	EP400	Q96L91	3159 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	FAM177B	A6PVY3	158 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	GNPAT	O15228	680 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	RPS6KA4	O75676	772 aa		18.67	■□□□□ 0.58
GPT2-204	ENST00000562801	ERC2	O15083	957 aa		18.66	■□□□□ 0.58
GPT2-204	ENST00000562801	CHML	P26374	656 aa		18.66	■□□□□ 0.58
GPT2-204	ENST00000562801	RBM6	P78332	1123 aa	Known RBP	18.66	■□□□□ 0.58
GPT2-204	ENST00000562801	PARP10	Q53GL7	1025 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms