RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 ZNF784Q8NCA9 323 aaPredicted RBP20.77■□□□□ 0.92
COMMD4-206ENST00000562610 MASTLQ96GX5 879 aa20.77■□□□□ 0.92
COMMD4-206ENST00000562610 SPINK5Q9NQ38 1064 aaPredicted RBP20.77■□□□□ 0.92
COMMD4-206ENST00000562610 ZNF219Q9P2Y4 722 aaPredicted RBP20.77■□□□□ 0.92
COMMD4-206ENST00000562610 DICER1Q9UPY3 1922 aaKnown RBP20.76■□□□□ 0.91
COMMD4-206ENST00000562610 TCIRG1Q13488 830 aa20.76■□□□□ 0.91
COMMD4-206ENST00000562610 RIC3Q7Z5B4 369 aa20.76■□□□□ 0.91
COMMD4-206ENST00000562610 CNKSR1Q969H4 720 aa20.76■□□□□ 0.91
COMMD4-206ENST00000562610 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
COMMD4-206ENST00000562610 ADCY9O60503 1353 aa20.75■□□□□ 0.91
COMMD4-206ENST00000562610 NPR1P16066 1061 aa20.75■□□□□ 0.91
COMMD4-206ENST00000562610 EXOSC9Q06265 439 aaKnown RBP20.75■□□□□ 0.91
COMMD4-206ENST00000562610 NLRP10Q86W26 655 aa20.75■□□□□ 0.91
COMMD4-206ENST00000562610 ZNF428Q96B54 188 aa20.75■□□□□ 0.91
COMMD4-206ENST00000562610 ZNF521Q96K83 1311 aa20.75■□□□□ 0.91
COMMD4-206ENST00000562610 PRPF40BQ6NWY9 871 aaKnown RBP20.74■□□□□ 0.91
COMMD4-206ENST00000562610 MIER1Q8N108 512 aa20.74■□□□□ 0.91
COMMD4-206ENST00000562610 DDX58O95786 925 aaKnown RBP20.73■□□□□ 0.91
COMMD4-206ENST00000562610 RASSF7Q02833 373 aa20.73■□□□□ 0.91
COMMD4-206ENST00000562610 TRMT112Q9UI30 125 aaKnown RBP20.73■□□□□ 0.91
COMMD4-206ENST00000562610 RNF123Q5XPI4 1314 aa20.73■□□□□ 0.91
COMMD4-206ENST00000562610 TAF1P21675 1872 aa20.73■□□□□ 0.91
COMMD4-206ENST00000562610 MYH3P11055 1940 aa20.72■□□□□ 0.91
COMMD4-206ENST00000562610 KLRG2A4D1S0 409 aaPredicted RBP20.72■□□□□ 0.91
COMMD4-206ENST00000562610 ATP5J2-PTCD1G3V325 749 aa20.72■□□□□ 0.91
COMMD4-206ENST00000562610 C21orf2O43822 256 aa20.72■□□□□ 0.91
COMMD4-206ENST00000562610 RPGRQ92834 1020 aaKnown RBP20.72■□□□□ 0.91
COMMD4-206ENST00000562610 SH3TC1Q8TE82 1336 aa20.71■□□□□ 0.91
COMMD4-206ENST00000562610 SLC4A2P04920 1241 aa20.7■□□□□ 0.9
COMMD4-206ENST00000562610 CRY2Q49AN0 593 aa20.7■□□□□ 0.9
COMMD4-206ENST00000562610 MYD88Q99836 296 aa20.7■□□□□ 0.9
COMMD4-206ENST00000562610 ISCA1Q9BUE6 129 aa20.7■□□□□ 0.9
COMMD4-206ENST00000562610 VAMP4O75379 141 aa20.69■□□□□ 0.9
COMMD4-206ENST00000562610 C9orf131Q5VYM1 1079 aa20.69■□□□□ 0.9
COMMD4-206ENST00000562610 ZNF526Q8TF50 670 aaPredicted RBP20.69■□□□□ 0.9
COMMD4-206ENST00000562610 NLRP3Q96P20 1036 aa20.69■□□□□ 0.9
COMMD4-206ENST00000562610 RNF181Q9P0P0 153 aa20.69■□□□□ 0.9
COMMD4-206ENST00000562610 ALDH1B1P30837 517 aa20.68■□□□□ 0.9
COMMD4-206ENST00000562610 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
COMMD4-206ENST00000562610 G2E3Q7L622 706 aa20.68■□□□□ 0.9
COMMD4-206ENST00000562610 MAP3K2Q9Y2U5 619 aa20.68■□□□□ 0.9
COMMD4-206ENST00000562610 E9PSI1 815 aa20.67■□□□□ 0.9
COMMD4-206ENST00000562610 NFKBIEO00221 500 aa20.67■□□□□ 0.9
COMMD4-206ENST00000562610 HCLS1P14317 486 aaPredicted RBP20.67■□□□□ 0.9
COMMD4-206ENST00000562610 RTL5Q5HYW3 569 aaPredicted RBP20.67■□□□□ 0.9
COMMD4-206ENST00000562610 SOGA3Q5TF21 947 aa20.67■□□□□ 0.9
COMMD4-206ENST00000562610 SYNE4Q8N205 404 aa20.67■□□□□ 0.9
COMMD4-206ENST00000562610 PI4KAP2A4QPH2 592 aa20.66■□□□□ 0.9
COMMD4-206ENST00000562610 FLIIQ13045 1269 aa20.66■□□□□ 0.9
COMMD4-206ENST00000562610 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
COMMD4-206ENST00000562610 KSR2Q6VAB6 950 aa20.66■□□□□ 0.9
COMMD4-206ENST00000562610 PI4KAP1Q8N8J0 262 aa20.66■□□□□ 0.9
COMMD4-206ENST00000562610 FAM89AQ96GI7 184 aa20.66■□□□□ 0.9
COMMD4-206ENST00000562610 RBM17Q96I25 401 aaKnown RBP20.66■□□□□ 0.9
COMMD4-206ENST00000562610 METTL22Q9BUU2 404 aaPredicted RBP20.66■□□□□ 0.9
COMMD4-206ENST00000562610 SPEF2Q9C093 1822 aa20.66■□□□□ 0.9
COMMD4-206ENST00000562610 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-206ENST00000562610 CCDC93Q567U6 631 aa20.65■□□□□ 0.9
COMMD4-206ENST00000562610 LMNB1P20700 586 aa20.64■□□□□ 0.89
COMMD4-206ENST00000562610 NEXNQ0ZGT2 675 aa20.64■□□□□ 0.89
COMMD4-206ENST00000562610 TRIM28Q13263 835 aaKnown RBP20.64■□□□□ 0.89
COMMD4-206ENST00000562610 TAOK3Q9H2K8 898 aa20.64■□□□□ 0.89
COMMD4-206ENST00000562610 GPBP1L1Q9HC44 474 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-206ENST00000562610 HOXA10P31260 410 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-206ENST00000562610 OLFM4Q6UX06 510 aa20.63■□□□□ 0.89
COMMD4-206ENST00000562610 CCDC191Q8NCU4 936 aa20.63■□□□□ 0.89
COMMD4-206ENST00000562610 CWC25Q9NXE8 425 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-206ENST00000562610 LRRC37AA6NMS7 1700 aa20.62■□□□□ 0.89
COMMD4-206ENST00000562610 LTBP3Q9NS15 1303 aa20.62■□□□□ 0.89
COMMD4-206ENST00000562610 PPEF1O14829 653 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-206ENST00000562610 SLFN5Q08AF3 891 aa20.62■□□□□ 0.89
COMMD4-206ENST00000562610 CDCA7LQ96GN5 454 aa20.62■□□□□ 0.89
COMMD4-206ENST00000562610 CRAMP1Q96RY5 1269 aa20.62■□□□□ 0.89
COMMD4-206ENST00000562610 ABCC4O15439 1325 aa20.61■□□□□ 0.89
COMMD4-206ENST00000562610 PRELPP51888 382 aa20.61■□□□□ 0.89
COMMD4-206ENST00000562610 C7orf43Q8WVR3 580 aa20.61■□□□□ 0.89
COMMD4-206ENST00000562610 IRS4O14654 1257 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-206ENST00000562610 DDX46Q7L014 1031 aaKnown RBP20.6■□□□□ 0.89
COMMD4-206ENST00000562610 ZBTB38Q8NAP3 1195 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-206ENST00000562610 IGKV5-2P06315 115 aa20.59■□□□□ 0.89
COMMD4-206ENST00000562610 CWF19L2Q2TBE0 894 aaKnown RBP20.59■□□□□ 0.89
COMMD4-206ENST00000562610 DNAAF4Q8WXU2 420 aa20.59■□□□□ 0.89
COMMD4-206ENST00000562610 ZC3H4Q9UPT8 1303 aaKnown RBP20.58■□□□□ 0.89
COMMD4-206ENST00000562610 COL4A1P02462 1669 aa20.58■□□□□ 0.89
COMMD4-206ENST00000562610 PCCAP05165 728 aaPredicted RBP20.58■□□□□ 0.89
COMMD4-206ENST00000562610 RTKN2Q8IZC4 609 aa20.58■□□□□ 0.89
COMMD4-206ENST00000562610 JARID2Q92833 1246 aaPredicted RBP20.58■□□□□ 0.89
COMMD4-206ENST00000562610 SNED1Q8TER0 1413 aa20.58■□□□□ 0.88
COMMD4-206ENST00000562610 NEURL1BA8MQ27 555 aa20.57■□□□□ 0.88
COMMD4-206ENST00000562610 HSP90B1P14625 803 aaKnown RBP20.57■□□□□ 0.88
COMMD4-206ENST00000562610 FKBP4Q02790 459 aaKnown RBP eCLIP20.57■□□□□ 0.88
COMMD4-206ENST00000562610 SLC51AQ86UW1 340 aa20.57■□□□□ 0.88
COMMD4-206ENST00000562610 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
COMMD4-206ENST00000562610 HNRNPUQ00839 825 aaKnown RBP eCLIP20.56■□□□□ 0.88
COMMD4-206ENST00000562610 GRAPQ13588 217 aa20.56■□□□□ 0.88
COMMD4-206ENST00000562610 CC2D2BQ6DHV5 1058 aa20.56■□□□□ 0.88
COMMD4-206ENST00000562610 GRAPLQ8TC17 118 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-206ENST00000562610 KDM2BQ8NHM5 1336 aa20.55■□□□□ 0.88
COMMD4-206ENST00000562610 F6X3S4 739 aa20.55■□□□□ 0.88
COMMD4-206ENST00000562610 ZNF277Q9NRM2 450 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms