RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 NLRP10Q86W26 655 aa21.01■□□□□ 0.95
PKD1-226ENST00000562425 TTLL6Q8N841 843 aa21.01■□□□□ 0.95
PKD1-226ENST00000562425 NTSR2O95665 410 aa21■□□□□ 0.95
PKD1-226ENST00000562425 HNRNPUQ00839 825 aaKnown RBP eCLIP21■□□□□ 0.95
PKD1-226ENST00000562425 TRIM28Q13263 835 aaKnown RBP21■□□□□ 0.95
PKD1-226ENST00000562425 ERFEQ4G0M1 354 aa21■□□□□ 0.95
PKD1-226ENST00000562425 KSR2Q6VAB6 950 aa21■□□□□ 0.95
PKD1-226ENST00000562425 NUTM1Q86Y26 1132 aa21■□□□□ 0.95
PKD1-226ENST00000562425 ZNF622Q969S3 477 aaKnown RBP eCLIP21■□□□□ 0.95
PKD1-226ENST00000562425 KLRG2A4D1S0 409 aaPredicted RBP20.99■□□□□ 0.95
PKD1-226ENST00000562425 STYK1Q6J9G0 422 aa20.99■□□□□ 0.95
PKD1-226ENST00000562425 CDCA7LQ96GN5 454 aa20.99■□□□□ 0.95
PKD1-226ENST00000562425 ISCA1Q9BUE6 129 aa20.99■□□□□ 0.95
PKD1-226ENST00000562425 TRMT112Q9UI30 125 aaKnown RBP20.99■□□□□ 0.95
PKD1-226ENST00000562425 SRGNP10124 158 aa20.98■□□□□ 0.95
PKD1-226ENST00000562425 NPR1P16066 1061 aa20.98■□□□□ 0.95
PKD1-226ENST00000562425 C9orf131Q5VYM1 1079 aa20.98■□□□□ 0.95
PKD1-226ENST00000562425 RBM46Q8TBY0 533 aaKnown RBP20.98■□□□□ 0.95
PKD1-226ENST00000562425 CNKSR1Q969H4 720 aa20.98■□□□□ 0.95
PKD1-226ENST00000562425 ZNF428Q96B54 188 aa20.98■□□□□ 0.95
PKD1-226ENST00000562425 MASTLQ96GX5 879 aa20.98■□□□□ 0.95
PKD1-226ENST00000562425 PI4KAP2A4QPH2 592 aa20.97■□□□□ 0.95
PKD1-226ENST00000562425 ATP5J2-PTCD1G3V325 749 aa20.97■□□□□ 0.95
PKD1-226ENST00000562425 NEXNQ0ZGT2 675 aa20.97■□□□□ 0.95
PKD1-226ENST00000562425 FLIIQ13045 1269 aa20.97■□□□□ 0.95
PKD1-226ENST00000562425 SLC10A5Q5PT55 438 aa20.97■□□□□ 0.95
PKD1-226ENST00000562425 TRMT2AQ8IZ69 625 aaKnown RBP20.97■□□□□ 0.95
PKD1-226ENST00000562425 PI4KAP1Q8N8J0 262 aa20.97■□□□□ 0.95
PKD1-226ENST00000562425 METTL22Q9BUU2 404 aaPredicted RBP20.97■□□□□ 0.95
PKD1-226ENST00000562425 NMRK2Q9NPI5 230 aa20.97■□□□□ 0.95
PKD1-226ENST00000562425 MAP3K2Q9Y2U5 619 aa20.97■□□□□ 0.95
PKD1-226ENST00000562425 FKBP5Q13451 457 aaPredicted RBP20.96■□□□□ 0.95
PKD1-226ENST00000562425 G2E3Q7L622 706 aa20.96■□□□□ 0.95
PKD1-226ENST00000562425 NLRP3Q96P20 1036 aa20.96■□□□□ 0.95
PKD1-226ENST00000562425 MYD88Q99836 296 aa20.96■□□□□ 0.95
PKD1-226ENST00000562425 KDM2BQ8NHM5 1336 aa20.96■□□□□ 0.95
PKD1-226ENST00000562425 SH3TC1Q8TE82 1336 aa20.96■□□□□ 0.95
PKD1-226ENST00000562425 CT47B1P0C2W7 299 aaPredicted RBP20.95■□□□□ 0.94
PKD1-226ENST00000562425 C16orf71Q8IYS4 520 aaPredicted RBP20.95■□□□□ 0.94
PKD1-226ENST00000562425 CCDC191Q8NCU4 936 aa20.95■□□□□ 0.94
PKD1-226ENST00000562425 RIC1Q4ADV7 1423 aa20.95■□□□□ 0.94
PKD1-226ENST00000562425 ANKRD31Q8N7Z5 1873 aa20.94■□□□□ 0.94
PKD1-226ENST00000562425 HSP90B1P14625 803 aaKnown RBP20.94■□□□□ 0.94
PKD1-226ENST00000562425 ALDH1B1P30837 517 aa20.94■□□□□ 0.94
PKD1-226ENST00000562425 FSTL1Q12841 308 aa20.94■□□□□ 0.94
PKD1-226ENST00000562425 DNAJC5GQ8N7S2 189 aa20.94■□□□□ 0.94
PKD1-226ENST00000562425 RPGRQ92834 1020 aaKnown RBP20.94■□□□□ 0.94
PKD1-226ENST00000562425 ZC3H4Q9UPT8 1303 aaKnown RBP20.94■□□□□ 0.94
PKD1-226ENST00000562425 ABCC12Q96J65 1359 aa20.94■□□□□ 0.94
PKD1-226ENST00000562425 SBF1O95248 1867 aa20.94■□□□□ 0.94
PKD1-226ENST00000562425 TNRC6CQ9HCJ0 1690 aaKnown RBP20.93■□□□□ 0.94
PKD1-226ENST00000562425 WDR90Q96KV7 1748 aa20.93■□□□□ 0.94
PKD1-226ENST00000562425 ANKRD36CQ5JPF3 1778 aa20.93■□□□□ 0.94
PKD1-226ENST00000562425 CRY2Q49AN0 593 aa20.93■□□□□ 0.94
PKD1-226ENST00000562425 CWC25Q9NXE8 425 aaPredicted RBP20.92■□□□□ 0.94
PKD1-226ENST00000562425 RNF181Q9P0P0 153 aa20.92■□□□□ 0.94
PKD1-226ENST00000562425 CACNA1FO60840 1977 aa20.92■□□□□ 0.94
PKD1-226ENST00000562425 DNAAF4Q8WXU2 420 aa20.91■□□□□ 0.94
PKD1-226ENST00000562425 RBM17Q96I25 401 aaKnown RBP20.91■□□□□ 0.94
PKD1-226ENST00000562425 DLEC1Q9Y238 1755 aa20.9■□□□□ 0.94
PKD1-226ENST00000562425 ARFGEF2Q9Y6D5 1785 aa20.9■□□□□ 0.94
PKD1-226ENST00000562425 HCLS1P14317 486 aaPredicted RBP20.9■□□□□ 0.94
PKD1-226ENST00000562425 ALDH1L2Q3SY69 923 aa20.9■□□□□ 0.94
PKD1-226ENST00000562425 SOGA3Q5TF21 947 aa20.9■□□□□ 0.94
PKD1-226ENST00000562425 PRPF40BQ6NWY9 871 aaKnown RBP20.9■□□□□ 0.94
PKD1-226ENST00000562425 ZBTB38Q8NAP3 1195 aaPredicted RBP20.9■□□□□ 0.94
PKD1-226ENST00000562425 FAM89AQ96GI7 184 aa20.9■□□□□ 0.94
PKD1-226ENST00000562425 HOXA10P31260 410 aaPredicted RBP20.89■□□□□ 0.93
PKD1-226ENST00000562425 C21orf2O43822 256 aa20.88■□□□□ 0.93
PKD1-226ENST00000562425 PCCAP05165 728 aaPredicted RBP20.88■□□□□ 0.93
PKD1-226ENST00000562425 SYNE4Q8N205 404 aa20.88■□□□□ 0.93
PKD1-226ENST00000562425 CRAMP1Q96RY5 1269 aa20.88■□□□□ 0.93
PKD1-226ENST00000562425 ZBED9Q6R2W3 1325 aa20.87■□□□□ 0.93
PKD1-226ENST00000562425 IRS4O14654 1257 aaPredicted RBP20.87■□□□□ 0.93
PKD1-226ENST00000562425 IGKV5-2P06315 115 aa20.87■□□□□ 0.93
PKD1-226ENST00000562425 MRPL50Q8N5N7 158 aaKnown RBP20.87■□□□□ 0.93
PKD1-226ENST00000562425 LINS1Q8NG48 757 aa20.87■□□□□ 0.93
PKD1-226ENST00000562425 SSH1Q8WYL5 1049 aa20.87■□□□□ 0.93
PKD1-226ENST00000562425 ZNF219Q9P2Y4 722 aaPredicted RBP20.87■□□□□ 0.93
PKD1-226ENST00000562425 COL11A2P13942 1736 aaPredicted RBP20.87■□□□□ 0.93
PKD1-226ENST00000562425 NEURL1BA8MQ27 555 aa20.86■□□□□ 0.93
PKD1-226ENST00000562425 RTL5Q5HYW3 569 aaPredicted RBP20.86■□□□□ 0.93
PKD1-226ENST00000562425 PTPRCP08575 1304 aa20.85■□□□□ 0.93
PKD1-226ENST00000562425 CWF19L2Q2TBE0 894 aaKnown RBP20.85■□□□□ 0.93
PKD1-226ENST00000562425 C3orf67Q6ZVT6 689 aa20.85■□□□□ 0.93
PKD1-226ENST00000562425 DDX46Q7L014 1031 aaKnown RBP20.85■□□□□ 0.93
PKD1-226ENST00000562425 KLRG1Q96E93 195 aa20.85■□□□□ 0.93
PKD1-226ENST00000562425 TMX4Q9H1E5 349 aaPredicted RBP20.85■□□□□ 0.93
PKD1-226ENST00000562425 SMC4Q9NTJ3 1288 aa20.85■□□□□ 0.93
PKD1-226ENST00000562425 F6X3S4 739 aa20.84■□□□□ 0.93
PKD1-226ENST00000562425 SF3B3Q15393 1217 aaKnown RBP20.84■□□□□ 0.93
PKD1-226ENST00000562425 CC2D2BQ6DHV5 1058 aa20.84■□□□□ 0.93
PKD1-226ENST00000562425 CDHR2Q9BYE9 1310 aa20.83■□□□□ 0.93
PKD1-226ENST00000562425 LMNB1P20700 586 aa20.83■□□□□ 0.93
PKD1-226ENST00000562425 GCKRQ14397 625 aa20.83■□□□□ 0.93
PKD1-226ENST00000562425 CCDC93Q567U6 631 aa20.83■□□□□ 0.93
PKD1-226ENST00000562425 JMYQ8N9B5 988 aa20.83■□□□□ 0.93
PKD1-226ENST00000562425 SMC1BQ8NDV3 1235 aa20.83■□□□□ 0.93
PKD1-226ENST00000562425 C7orf43Q8WVR3 580 aa20.83■□□□□ 0.93
PKD1-226ENST00000562425 PDE8AO60658 829 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms