RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 COPRSQ9NQ92 184 aa12.51□□□□□ -0.41
TUBGCP4-202ENST00000561691 PRDM4Q9UKN5 801 aa12.51□□□□□ -0.41
TUBGCP4-202ENST00000561691 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
TUBGCP4-202ENST00000561691 TRIM28Q13263 835 aaKnown RBP12.5□□□□□ -0.41
TUBGCP4-202ENST00000561691 SNX21Q969T3 373 aa12.5□□□□□ -0.41
TUBGCP4-202ENST00000561691 JCADQ9P266 1359 aa12.5□□□□□ -0.41
TUBGCP4-202ENST00000561691 DDB1Q16531 1140 aa12.5□□□□□ -0.41
TUBGCP4-202ENST00000561691 RREB1Q92766 1687 aa12.5□□□□□ -0.41
TUBGCP4-202ENST00000561691 EAF2Q96CJ1 260 aaPredicted RBP12.5□□□□□ -0.41
TUBGCP4-202ENST00000561691 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
TUBGCP4-202ENST00000561691 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 BECN1Q14457 450 aa12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 CWC25Q9NXE8 425 aaPredicted RBP12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 TTC41PQ6P2S7 1318 aa12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 TLR7Q9NYK1 1049 aaKnown RBP12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 ZBTB1Q9Y2K1 713 aa12.49□□□□□ -0.41
TUBGCP4-202ENST00000561691 FSD2A1L4K1 749 aa12.48□□□□□ -0.41
TUBGCP4-202ENST00000561691 ERC2O15083 957 aa12.48□□□□□ -0.41
TUBGCP4-202ENST00000561691 STARD3NLO95772 234 aa12.48□□□□□ -0.41
TUBGCP4-202ENST00000561691 DDIT3P35638 169 aa12.48□□□□□ -0.41
TUBGCP4-202ENST00000561691 VPS72Q15906 364 aa12.48□□□□□ -0.41
TUBGCP4-202ENST00000561691 MAP3K15Q6ZN16 1313 aa12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 HLFQ16534 295 aa12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 IL17RAQ96F46 866 aa12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 PDCL3Q9H2J4 239 aa12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 FGD1P98174 961 aa12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 INTS5Q6P9B9 1019 aaKnown RBP12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 SIL1Q9H173 461 aa12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 ECHDC1Q9NTX5 307 aa12.47□□□□□ -0.41
TUBGCP4-202ENST00000561691 MAP4K4O95819 1239 aaPredicted RBP12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 TPM2P07951 284 aa12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 XRCC6P12956 609 aaKnown RBP eCLIP12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 G3BP1Q13283 466 aaKnown RBP eCLIP12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 OS9Q13438 667 aaPredicted RBP12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 GIGYF2Q6Y7W6 1299 aaKnown RBP12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 ATG9AQ7Z3C6 839 aa12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 AACSQ86V21 672 aa12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 ACSBG1Q96GR2 724 aa12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 THSD7AQ9UPZ6 1657 aa12.46□□□□□ -0.42
TUBGCP4-202ENST00000561691 ZBTB22O15209 634 aa12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 KCNQ2O43526 872 aa12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 GLRX3O76003 335 aaKnown RBP12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 ITPK1Q13572 414 aa12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 RILPL2Q969X0 211 aa12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 SYTL4Q96C24 671 aaPredicted RBP12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 A0A0U1RQG5 324 aaPredicted RBP12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 TRIM6-TRIM34B2RNG4 842 aa12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 PCCAP05165 728 aaPredicted RBP12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 CASC1Q6TDU7 716 aa12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 CCDC8Q9H0W5 538 aaPredicted RBP12.45□□□□□ -0.42
TUBGCP4-202ENST00000561691 REC8O95072 547 aa12.44□□□□□ -0.42
TUBGCP4-202ENST00000561691 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
TUBGCP4-202ENST00000561691 TFCP2Q12800 502 aa12.44□□□□□ -0.42
TUBGCP4-202ENST00000561691 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
TUBGCP4-202ENST00000561691 C8orf37Q96NL8 207 aa12.44□□□□□ -0.42
TUBGCP4-202ENST00000561691 DBNLQ9UJU6 430 aaKnown RBP12.44□□□□□ -0.42
TUBGCP4-202ENST00000561691 SPATA31A6Q5VVP1 1343 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 ZNF831Q5JPB2 1677 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 SGSM2O43147 1006 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 NLRP10Q86W26 655 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 SYNE4Q8N205 404 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 PALD1Q9ULE6 856 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 CSF1RP07333 972 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 IFIT2P09913 472 aaKnown RBP12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 SIK1P57059 783 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 TNNI3KQ59H18 835 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 KIF6Q6ZMV9 814 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 CERKQ8TCT0 537 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 FPGT-TNNI3KV9GXZ4 949 aa12.43□□□□□ -0.42
TUBGCP4-202ENST00000561691 PALLDQ8WX93 1383 aa12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 UBN2Q6ZU65 1347 aa12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 ERVV-1B6SEH8 477 aa12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 RABEP1Q15276 862 aa12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 PTF1AQ7RTS3 328 aa12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 ZNF34Q8IZ26 560 aa12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 ZBTB38Q8NAP3 1195 aaPredicted RBP12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 SLKQ9H2G2 1235 aaPredicted RBP12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
TUBGCP4-202ENST00000561691 GOLGA6L3A6NEY3 463 aa12.41□□□□□ -0.42
TUBGCP4-202ENST00000561691 EPB41L2O43491 1005 aaKnown RBP12.41□□□□□ -0.42
TUBGCP4-202ENST00000561691 HSCBQ8IWL3 235 aa12.41□□□□□ -0.42
TUBGCP4-202ENST00000561691 CNTROBQ8N137 903 aa12.41□□□□□ -0.42
TUBGCP4-202ENST00000561691 FAM89AQ96GI7 184 aa12.41□□□□□ -0.42
TUBGCP4-202ENST00000561691 LSG1Q9H089 658 aaKnown RBP12.41□□□□□ -0.42
TUBGCP4-202ENST00000561691 ZNF330Q9Y3S2 320 aaPredicted RBP12.41□□□□□ -0.42
TUBGCP4-202ENST00000561691 CCDC9Q9Y3X0 531 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms