RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CLP1Q92989 425 aaKnown RBP6.59□□□□□ -1.35
HERC1-215ENST00000561436 DMGDHQ9UI17 866 aaKnown RBP6.59□□□□□ -1.35
HERC1-215ENST00000561436 CNTNAP5Q8WYK1 1306 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 FAM181BA6NEQ2 426 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 TGFBR3LH3BV60 316 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 IDH3AP50213 366 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 SNRPNP63162 240 aaKnown RBP6.58□□□□□ -1.36
HERC1-215ENST00000561436 TBC1D8BQ0IIM8 1120 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 SPEM2Q0P670 501 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 SYT9Q86SS6 491 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 EDARADDQ8WWZ3 215 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 IFT43Q96FT9 208 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 ANKIB1Q9P2G1 1089 aa6.58□□□□□ -1.36
HERC1-215ENST00000561436 TNFRSF10BO14763 440 aa6.57□□□□□ -1.36
HERC1-215ENST00000561436 KRT25Q7Z3Z0 450 aa6.57□□□□□ -1.36
HERC1-215ENST00000561436 AEBP1Q8IUX7 1158 aa6.57□□□□□ -1.36
HERC1-215ENST00000561436 ETFBKMTQ8IXQ9 262 aa6.57□□□□□ -1.36
HERC1-215ENST00000561436 BHMTQ93088 406 aa6.57□□□□□ -1.36
HERC1-215ENST00000561436 IGFLR1Q9H665 355 aa6.57□□□□□ -1.36
HERC1-215ENST00000561436 PODXL2Q9NZ53 605 aa6.57□□□□□ -1.36
HERC1-215ENST00000561436 KCNH4Q9UQ05 1017 aa6.57□□□□□ -1.36
HERC1-215ENST00000561436 GPC6Q9Y625 555 aaPredicted RBP6.57□□□□□ -1.36
HERC1-215ENST00000561436 MICAL2O94851 1124 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 ARAFP10398 606 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 AMPD1P23109 780 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 MARSP56192 900 aaKnown RBP6.56□□□□□ -1.36
HERC1-215ENST00000561436 MTMR3Q13615 1198 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 C11orf91Q3C1V1 193 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 FAM182BQ5T319 152 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 ZNF468Q5VIY5 522 aaPredicted RBP6.56□□□□□ -1.36
HERC1-215ENST00000561436 SLCO4C1Q6ZQN7 724 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 TREML1Q86YW5 311 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 GOLGA6L1Q8N7Z2 621 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 MYO19Q96H55 970 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 RRAGCQ9HB90 399 aa6.56□□□□□ -1.36
HERC1-215ENST00000561436 OPLAHO14841 1288 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 ZBTB39O15060 712 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 BRD1O95696 1058 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 EPXP11678 715 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 ADH6P28332 368 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 INPP5BP32019 993 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 IRS1P35568 1242 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 GSK3AP49840 483 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 TRIM26Q12899 539 aaPredicted RBP6.55□□□□□ -1.36
HERC1-215ENST00000561436 C16orf46Q6P387 395 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 RGL4Q8IZJ4 473 aa6.55□□□□□ -1.36
HERC1-215ENST00000561436 HOXB4P17483 251 aaPredicted RBP6.54□□□□□ -1.36
HERC1-215ENST00000561436 NFKB1P19838 968 aa6.54□□□□□ -1.36
HERC1-215ENST00000561436 KCNA1Q09470 495 aa6.54□□□□□ -1.36
HERC1-215ENST00000561436 LAMC2Q13753 1193 aa6.54□□□□□ -1.36
HERC1-215ENST00000561436 PHLDB3Q6NSJ2 640 aa6.54□□□□□ -1.36
HERC1-215ENST00000561436 ANO2Q9NQ90 1003 aa6.54□□□□□ -1.36
HERC1-215ENST00000561436 GDF2Q9UK05 429 aaPredicted RBP6.54□□□□□ -1.36
HERC1-215ENST00000561436 TARSP26639 723 aaKnown RBP6.53□□□□□ -1.36
HERC1-215ENST00000561436 IER5Q5VY09 327 aa6.53□□□□□ -1.36
HERC1-215ENST00000561436 C8orf86Q6ZUL3 223 aa6.53□□□□□ -1.36
HERC1-215ENST00000561436 ATCAYQ86WG3 371 aa6.53□□□□□ -1.36
HERC1-215ENST00000561436 CMTR1Q8N1G2 835 aaKnown RBP6.53□□□□□ -1.36
HERC1-215ENST00000561436 BTBD6Q96KE9 485 aa6.53□□□□□ -1.36
HERC1-215ENST00000561436 RB1CC1Q8TDY2 1594 aa6.52□□□□□ -1.36
HERC1-215ENST00000561436 SASH3O75995 380 aa6.52□□□□□ -1.37
HERC1-215ENST00000561436 SSFA2P28290 1259 aa6.52□□□□□ -1.37
HERC1-215ENST00000561436 ARSDP51689 593 aa6.52□□□□□ -1.37
HERC1-215ENST00000561436 KCNQ4P56696 695 aa6.52□□□□□ -1.37
HERC1-215ENST00000561436 MLLT1Q03111 559 aaPredicted RBP6.52□□□□□ -1.37
HERC1-215ENST00000561436 CHSY3Q70JA7 882 aa6.52□□□□□ -1.37
HERC1-215ENST00000561436 GSX2Q9BZM3 304 aa6.52□□□□□ -1.37
HERC1-215ENST00000561436 ENAMQ9NRM1 1142 aa6.52□□□□□ -1.37
HERC1-215ENST00000561436 ZFATQ9P243 1243 aa6.52□□□□□ -1.37
HERC1-215ENST00000561436 RTCBQ9Y3I0 505 aaKnown RBP6.52□□□□□ -1.37
HERC1-215ENST00000561436 ZNF211Q13398 564 aaPredicted RBP6.51□□□□□ -1.37
HERC1-215ENST00000561436 TRIP4Q15650 581 aaPredicted RBP6.51□□□□□ -1.37
HERC1-215ENST00000561436 HIF1AQ16665 826 aa6.51□□□□□ -1.37
HERC1-215ENST00000561436 GPR152Q8TDT2 470 aa6.51□□□□□ -1.37
HERC1-215ENST00000561436 GTF3C2Q8WUA4 911 aaPredicted RBP6.51□□□□□ -1.37
HERC1-215ENST00000561436 SUV39H2Q9H5I1 410 aa6.51□□□□□ -1.37
HERC1-215ENST00000561436 CCDC9Q9Y3X0 531 aaKnown RBP6.51□□□□□ -1.37
HERC1-215ENST00000561436 ADH7P40394 386 aa6.5□□□□□ -1.37
HERC1-215ENST00000561436 CCINQ13939 588 aa6.5□□□□□ -1.37
HERC1-215ENST00000561436 PNMA5Q96PV4 448 aa6.5□□□□□ -1.37
HERC1-215ENST00000561436 MDFIQ99750 246 aa6.5□□□□□ -1.37
HERC1-215ENST00000561436 UBE2OQ9C0C9 1292 aaKnown RBP6.5□□□□□ -1.37
HERC1-215ENST00000561436 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.5□□□□□ -1.373e-11■■■■■ 99.4
HERC1-215ENST00000561436 STARD13Q9Y3M8 1113 aa6.5□□□□□ -1.37
HERC1-215ENST00000561436 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.5□□□□□ -1.37
HERC1-215ENST00000561436 NACADO15069 1562 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 ELOA3CA0A087WX78 387 aaPredicted RBP6.49□□□□□ -1.37
HERC1-215ENST00000561436 ELOA3DA6NLF2 546 aaPredicted RBP6.49□□□□□ -1.37
HERC1-215ENST00000561436 PTCD1O75127 700 aaKnown RBP6.49□□□□□ -1.37
HERC1-215ENST00000561436 SIN3BO75182 1162 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 XYLBO75191 536 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 ABL1P00519 1130 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 ALBP02768 609 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 BRD2P25440 801 aaKnown RBP6.49□□□□□ -1.37
HERC1-215ENST00000561436 ZAP70P43403 619 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 RASSF7Q02833 373 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 ELOA3BQ3SY89 546 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 HFE2Q6ZVN8 426 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 ELOA3Q8NG57 546 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 COL26A1Q96A83 441 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms