RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 SAGE1Q9NXZ1 904 aa15.79■□□□□ 0.12
IRF9-213ENST00000561342 UBR2Q8IWV8 1755 aa15.79■□□□□ 0.12
IRF9-213ENST00000561342 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
IRF9-213ENST00000561342 HABP4Q5JVS0 413 aaKnown RBP15.78■□□□□ 0.12
IRF9-213ENST00000561342 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
IRF9-213ENST00000561342 PRKAR2BP31323 418 aa15.77■□□□□ 0.12
IRF9-213ENST00000561342 RSPH6AQ9H0K4 717 aa15.77■□□□□ 0.12
IRF9-213ENST00000561342 ADARB2Q9NS39 739 aaKnown RBP15.77■□□□□ 0.12
IRF9-213ENST00000561342 KLRG2A4D1S0 409 aaPredicted RBP15.76■□□□□ 0.11
IRF9-213ENST00000561342 CAMTA2O94983 1202 aa15.76■□□□□ 0.11
IRF9-213ENST00000561342 CTU1Q7Z7A3 348 aaKnown RBP15.76■□□□□ 0.11
IRF9-213ENST00000561342 GLIS2Q9BZE0 524 aaPredicted RBP15.76■□□□□ 0.11
IRF9-213ENST00000561342 CC2D2BQ6DHV5 1058 aa15.75■□□□□ 0.11
IRF9-213ENST00000561342 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
IRF9-213ENST00000561342 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
IRF9-213ENST00000561342 ZIC5Q96T25 663 aa15.75■□□□□ 0.11
IRF9-213ENST00000561342 BTBD11A6QL63 1104 aa15.74■□□□□ 0.11
IRF9-213ENST00000561342 HTATSF1O43719 755 aaKnown RBP15.74■□□□□ 0.11
IRF9-213ENST00000561342 HUNKP57058 714 aa15.74■□□□□ 0.11
IRF9-213ENST00000561342 CNGB1Q14028 1251 aaPredicted RBP15.74■□□□□ 0.11
IRF9-213ENST00000561342 DZIP3Q86Y13 1208 aaKnown RBP15.74■□□□□ 0.11
IRF9-213ENST00000561342 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
IRF9-213ENST00000561342 PHACTR3Q96KR7 559 aa15.74■□□□□ 0.11
IRF9-213ENST00000561342 TRPA1O75762 1119 aa15.73■□□□□ 0.11
IRF9-213ENST00000561342 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
IRF9-213ENST00000561342 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
IRF9-213ENST00000561342 GRIPAP1Q4V328 841 aa15.73■□□□□ 0.11
IRF9-213ENST00000561342 CDC37L1Q7L3B6 337 aa15.73■□□□□ 0.11
IRF9-213ENST00000561342 GPRC5DQ9NZD1 345 aa15.73■□□□□ 0.11
IRF9-213ENST00000561342 HPS5Q9UPZ3 1129 aa15.73■□□□□ 0.11
IRF9-213ENST00000561342 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
IRF9-213ENST00000561342 RGL2O15211 777 aa15.72■□□□□ 0.11
IRF9-213ENST00000561342 PPP2R1AP30153 589 aa15.72■□□□□ 0.11
IRF9-213ENST00000561342 PKN2Q16513 984 aaKnown RBP15.72■□□□□ 0.11
IRF9-213ENST00000561342 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
IRF9-213ENST00000561342 NIM1KQ8IY84 436 aa15.72■□□□□ 0.11
IRF9-213ENST00000561342 ZC3H15Q8WU90 426 aaKnown RBP15.72■□□□□ 0.11
IRF9-213ENST00000561342 RNF186Q9NXI6 227 aa15.72■□□□□ 0.11
IRF9-213ENST00000561342 ARFGEF2Q9Y6D5 1785 aa15.72■□□□□ 0.11
IRF9-213ENST00000561342 CCDC102AQ96A19 550 aa15.71■□□□□ 0.11
IRF9-213ENST00000561342 PGAP2Q9UHJ9 254 aa15.71■□□□□ 0.11
IRF9-213ENST00000561342 SIPA1L3O60292 1781 aaPredicted RBP15.71■□□□□ 0.11
IRF9-213ENST00000561342 SCN7AQ01118 1682 aa15.7■□□□□ 0.1
IRF9-213ENST00000561342 A1BGP04217 495 aa15.7■□□□□ 0.1
IRF9-213ENST00000561342 SNRPA1P09661 255 aaKnown RBP15.7■□□□□ 0.1
IRF9-213ENST00000561342 GTF2E1P29083 439 aaPredicted RBP15.7■□□□□ 0.1
IRF9-213ENST00000561342 KIF23Q02241 960 aaPredicted RBP15.7■□□□□ 0.1
IRF9-213ENST00000561342 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
IRF9-213ENST00000561342 TRPM7Q96QT4 1865 aa15.69■□□□□ 0.1
IRF9-213ENST00000561342 CACNA1SQ13698 1873 aa15.68■□□□□ 0.1
IRF9-213ENST00000561342 NEFMP07197 916 aa15.68■□□□□ 0.1
IRF9-213ENST00000561342 FAM155AB1AL88 458 aaPredicted RBP15.67■□□□□ 0.1
IRF9-213ENST00000561342 KCNQ3O43525 872 aa15.67■□□□□ 0.1
IRF9-213ENST00000561342 HDAC9Q9UKV0 1011 aa15.67■□□□□ 0.1
IRF9-213ENST00000561342 NIP7Q9Y221 180 aaKnown RBP eCLIP15.67■□□□□ 0.1
IRF9-213ENST00000561342 USP16Q9Y5T5 823 aa15.67■□□□□ 0.1
IRF9-213ENST00000561342 FAM177BA6PVY3 158 aa15.66■□□□□ 0.1
IRF9-213ENST00000561342 PPIP5K2O43314 1243 aa15.66■□□□□ 0.1
IRF9-213ENST00000561342 ZNF157P51786 506 aaPredicted RBP15.66■□□□□ 0.1
IRF9-213ENST00000561342 TAF7Q15545 349 aaPredicted RBP15.66■□□□□ 0.1
IRF9-213ENST00000561342 MCM10Q7L590 875 aa15.66■□□□□ 0.1
IRF9-213ENST00000561342 C2orf69Q8N8R5 385 aa15.66■□□□□ 0.1
IRF9-213ENST00000561342 PNISRQ8TF01 805 aaKnown RBP15.66■□□□□ 0.1
IRF9-213ENST00000561342 TMX4Q9H1E5 349 aaPredicted RBP15.66■□□□□ 0.1
IRF9-213ENST00000561342 SNED1Q8TER0 1413 aa15.66■□□□□ 0.1
IRF9-213ENST00000561342 COL4A5P29400 1685 aa15.65■□□□□ 0.1
IRF9-213ENST00000561342 GMPSP49915 693 aaPredicted RBP15.65■□□□□ 0.1
IRF9-213ENST00000561342 FXR1P51114 621 aaKnown RBP eCLIP15.65■□□□□ 0.1
IRF9-213ENST00000561342 REM2Q8IYK8 340 aaPredicted RBP15.65■□□□□ 0.1
IRF9-213ENST00000561342 BCL2L13Q9BXK5 485 aa15.65■□□□□ 0.1
IRF9-213ENST00000561342 CDHR2Q9BYE9 1310 aa15.65■□□□□ 0.1
IRF9-213ENST00000561342 BCORQ6W2J9 1755 aa15.64■□□□□ 0.1
IRF9-213ENST00000561342 CXCL9Q07325 125 aa15.64■□□□□ 0.09
IRF9-213ENST00000561342 USP48Q86UV5 1035 aa15.64■□□□□ 0.09
IRF9-213ENST00000561342 RPGRQ92834 1020 aaKnown RBP15.64■□□□□ 0.09
IRF9-213ENST00000561342 VPS33BQ9H267 617 aa15.64■□□□□ 0.09
IRF9-213ENST00000561342 PNNQ9H307 717 aaKnown RBP15.64■□□□□ 0.09
IRF9-213ENST00000561342 GBA2Q9HCG7 927 aaPredicted RBP15.64■□□□□ 0.09
IRF9-213ENST00000561342 ZNRF3Q9ULT6 936 aa15.64■□□□□ 0.09
IRF9-213ENST00000561342 HIRAP54198 1017 aaPredicted RBP15.63■□□□□ 0.09
IRF9-213ENST00000561342 AOC3Q16853 763 aa15.63■□□□□ 0.09
IRF9-213ENST00000561342 CRY2Q49AN0 593 aa15.63■□□□□ 0.09
IRF9-213ENST00000561342 CSRNP1Q96S65 589 aa15.63■□□□□ 0.09
IRF9-213ENST00000561342 H7C1D1 291 aa15.61■□□□□ 0.09
IRF9-213ENST00000561342 DLL1O00548 723 aa15.61■□□□□ 0.09
IRF9-213ENST00000561342 DCTN1Q14203 1278 aa15.61■□□□□ 0.09
IRF9-213ENST00000561342 TNIP1Q15025 636 aa15.61■□□□□ 0.09
IRF9-213ENST00000561342 TRPM4Q8TD43 1214 aa15.61■□□□□ 0.09
IRF9-213ENST00000561342 NYXQ9GZU5 481 aa15.61■□□□□ 0.09
IRF9-213ENST00000561342 PRAMEF22A3QJZ6 481 aa15.6■□□□□ 0.09
IRF9-213ENST00000561342 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
IRF9-213ENST00000561342 TCERG1O14776 1098 aaKnown RBP15.6■□□□□ 0.09
IRF9-213ENST00000561342 PPEF1O14829 653 aaPredicted RBP15.6■□□□□ 0.09
IRF9-213ENST00000561342 SLC10A3P09131 477 aa15.6■□□□□ 0.09
IRF9-213ENST00000561342 PIP4K2AP48426 406 aaPredicted RBP15.6■□□□□ 0.09
IRF9-213ENST00000561342 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
IRF9-213ENST00000561342 FBXO46Q6PJ61 603 aaPredicted RBP15.6■□□□□ 0.09
IRF9-213ENST00000561342 KRT26Q7Z3Y9 468 aa15.6■□□□□ 0.09
IRF9-213ENST00000561342 SUPT20HQ8NEM7 779 aa15.6■□□□□ 0.09
IRF9-213ENST00000561342 CNOT7Q9UIV1 285 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms